Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS09230

Experiment: NAG carbon and (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG carbon and (N)
2,042,775	+		PFLU_RS09225	0.21	+1.4
2,042,775	+		PFLU_RS09225	0.21	+1.5
2,042,776	-		PFLU_RS09225	0.21	+2.5
2,042,776	-		PFLU_RS09225	0.21	-0.6
2,042,776	-		PFLU_RS09225	0.21	+1.3
2,042,796	+		PFLU_RS09225	0.23	-1.3
2,042,946	+		PFLU_RS09225	0.35	+0.7
2,042,947	-		PFLU_RS09225	0.35	-0.6
2,043,013	+		PFLU_RS09225	0.41	+2.7
2,043,013	+		PFLU_RS09225	0.41	+0.8
2,043,013	+		PFLU_RS09225	0.41	+1.4
2,043,013	+		PFLU_RS09225	0.41	-1.1
2,043,013	+		PFLU_RS09225	0.41	-1.6
2,043,013	+		PFLU_RS09225	0.41	+0.4
2,043,013	+		PFLU_RS09225	0.41	-1.7
2,043,014	-		PFLU_RS09225	0.41	+0.7
2,043,014	-		PFLU_RS09225	0.41	+0.0
2,043,014	-		PFLU_RS09225	0.41	-2.8
2,043,014	-		PFLU_RS09225	0.41	-0.3
2,043,014	-		PFLU_RS09225	0.41	-1.0
2,043,052	+		PFLU_RS09225	0.44	+0.5
2,043,052	+		PFLU_RS09225	0.44	+3.3
2,043,052	+		PFLU_RS09225	0.44	-1.7
2,043,052	+		PFLU_RS09225	0.44	+1.1
2,043,052	+		PFLU_RS09225	0.44	+2.5
2,043,052	+		PFLU_RS09225	0.44	-0.6
2,043,052	+		PFLU_RS09225	0.44	+1.8
2,043,052	+		PFLU_RS09225	0.44	-0.0
2,043,052	+		PFLU_RS09225	0.44	+0.6
2,043,052	+		PFLU_RS09225	0.44	+4.5
2,043,052	+		PFLU_RS09225	0.44	+0.2
2,043,052	+		PFLU_RS09225	0.44	-0.3
2,043,052	+		PFLU_RS09225	0.44	+2.0
2,043,052	+		PFLU_RS09225	0.44	-2.6
2,043,053	-		PFLU_RS09225	0.44	-0.1
2,043,053	-		PFLU_RS09225	0.44	+1.1
2,043,053	-		PFLU_RS09225	0.44	-1.1
2,043,053	-		PFLU_RS09225	0.44	+3.0
2,043,053	-		PFLU_RS09225	0.44	-1.0
2,043,053	-		PFLU_RS09225	0.44	-1.8
2,043,053	-		PFLU_RS09225	0.44	-1.3
2,043,053	-		PFLU_RS09225	0.44	-0.9
2,043,053	-		PFLU_RS09225	0.44	+0.1
2,043,053	-		PFLU_RS09225	0.44	+0.4
2,043,053	-		PFLU_RS09225	0.44	+3.1
2,043,053	-		PFLU_RS09225	0.44	+1.7
2,043,053	-		PFLU_RS09225	0.44	+0.9
2,043,053	-		PFLU_RS09225	0.44	+0.1
2,043,053	-		PFLU_RS09225	0.44	+0.8
2,043,053	-		PFLU_RS09225	0.44	+1.4
2,043,053	-		PFLU_RS09225	0.44	+0.9
2,043,053	-		PFLU_RS09225	0.44	+2.2
2,043,053	-		PFLU_RS09225	0.44	+1.9
2,043,053	-		PFLU_RS09225	0.44	-0.9
2,043,053	-		PFLU_RS09225	0.44	-2.1
2,043,053	-		PFLU_RS09225	0.44	+0.1
2,043,053	-		PFLU_RS09225	0.44	-1.5
2,043,056	+		PFLU_RS09225	0.45	-0.9
2,043,056	+		PFLU_RS09225	0.45	+0.5
2,043,056	+		PFLU_RS09225	0.45	+0.5
2,043,056	+		PFLU_RS09225	0.45	+1.0
2,043,056	+		PFLU_RS09225	0.45	-0.4
2,043,057	-		PFLU_RS09225	0.45	+0.9
2,043,057	-		PFLU_RS09225	0.45	+2.0
2,043,057	-		PFLU_RS09225	0.45	+0.7
2,043,057	-		PFLU_RS09225	0.45	-2.2
2,043,057	-		PFLU_RS09225	0.45	+0.7
2,043,057	-		PFLU_RS09225	0.45	+0.0
2,043,057	-		PFLU_RS09225	0.45	+3.6
2,043,057	-		PFLU_RS09225	0.45	-1.6
2,043,057	-		PFLU_RS09225	0.45	+2.5
2,043,057	-		PFLU_RS09225	0.45	+1.9
2,043,057	-		PFLU_RS09225	0.45	-0.1
2,043,057	-		PFLU_RS09225	0.45	-0.3
2,043,057	-		PFLU_RS09225	0.45	+0.4
2,043,057	-		PFLU_RS09225	0.45	+2.4
2,043,057	-		PFLU_RS09225	0.45	-0.3
2,043,057	-		PFLU_RS09225	0.45	-2.7
2,043,125	+		PFLU_RS09225	0.50	+0.4
2,043,125	+		PFLU_RS09225	0.50	-2.6
2,043,125	+		PFLU_RS09225	0.50	-1.3
2,043,126	-		PFLU_RS09225	0.50	-0.6
2,043,126	-		PFLU_RS09225	0.50	+0.7
2,043,126	-		PFLU_RS09225	0.50	+2.1
2,043,126	-		PFLU_RS09225	0.50	+5.0
2,043,126	-		PFLU_RS09225	0.50	-0.7
2,043,199	+		PFLU_RS09225	0.57	-1.1
2,043,199	+		PFLU_RS09225	0.57	+1.6
2,043,199	+		PFLU_RS09225	0.57	-2.2
2,043,199	+		PFLU_RS09225	0.57	+2.4
2,043,199	+		PFLU_RS09225	0.57	+0.5
2,043,200	-		PFLU_RS09225	0.57	+0.7
2,043,200	-		PFLU_RS09225	0.57	-1.8
2,043,200	-		PFLU_RS09225	0.57	+0.7
2,043,200	-		PFLU_RS09225	0.57	+2.1
2,043,200	-		PFLU_RS09225	0.57	+1.4
2,043,200	-		PFLU_RS09225	0.57	-0.8
2,043,200	-		PFLU_RS09225	0.57	-2.8
2,043,200	-		PFLU_RS09225	0.57	+0.6
2,043,200	-		PFLU_RS09225	0.57	+1.4
2,043,200	-		PFLU_RS09225	0.57	+1.8
2,043,200	-		PFLU_RS09225	0.57	+3.8
2,043,200	-		PFLU_RS09225	0.57	-0.2
2,043,200	-		PFLU_RS09225	0.57	+0.9
2,043,338	+		PFLU_RS09225	0.68	-0.6
2,043,338	+		PFLU_RS09225	0.68	-2.6
2,043,338	+		PFLU_RS09225	0.68	-2.1
2,043,338	+		PFLU_RS09225	0.68	-0.6
2,043,338	+		PFLU_RS09225	0.68	-3.1
2,043,338	+		PFLU_RS09225	0.68	+0.9
2,043,338	+		PFLU_RS09225	0.68	+1.6
2,043,338	+		PFLU_RS09225	0.68	-2.6
2,043,338	+		PFLU_RS09225	0.68	-0.5
2,043,338	+		PFLU_RS09225	0.68	+2.2
2,043,338	+		PFLU_RS09225	0.68	-0.6
2,043,338	+		PFLU_RS09225	0.68	+0.5
2,043,338	+		PFLU_RS09225	0.68	-2.1
2,043,338	+		PFLU_RS09225	0.68	-1.6
2,043,338	+		PFLU_RS09225	0.68	+1.0
2,043,338	+		PFLU_RS09225	0.68	-1.3
2,043,338	+		PFLU_RS09225	0.68	+0.6
2,043,338	+		PFLU_RS09225	0.68	-1.5
2,043,338	+		PFLU_RS09225	0.68	+0.9
2,043,338	+		PFLU_RS09225	0.68	+0.7
2,043,338	+		PFLU_RS09225	0.68	-0.1
2,043,338	+		PFLU_RS09225	0.68	-1.1
2,043,338	+		PFLU_RS09225	0.68	-0.9
2,043,338	+		PFLU_RS09225	0.68	-0.9
2,043,338	+		PFLU_RS09225	0.68	-0.6
2,043,339	-		PFLU_RS09225	0.68	-2.0
2,043,339	-		PFLU_RS09225	0.68	+0.4
2,043,339	-		PFLU_RS09225	0.68	-0.7
2,043,339	-		PFLU_RS09225	0.68	+1.4
2,043,339	-		PFLU_RS09225	0.68	+1.3
2,043,339	-		PFLU_RS09225	0.68	-1.3
2,043,339	-		PFLU_RS09225	0.68	-1.6
2,043,339	-		PFLU_RS09225	0.68	-2.1
2,043,339	-		PFLU_RS09225	0.68	-0.6
2,043,339	-		PFLU_RS09225	0.68	+2.5
2,043,339	-		PFLU_RS09225	0.68	+1.3
2,043,339	-		PFLU_RS09225	0.68	-1.3
2,043,339	-		PFLU_RS09225	0.68	+1.0
2,043,339	-		PFLU_RS09225	0.68	-2.3
2,043,339	-		PFLU_RS09225	0.68	-0.9
2,043,339	-		PFLU_RS09225	0.68	+0.7
2,043,339	-		PFLU_RS09225	0.68	-1.1
2,043,339	-		PFLU_RS09225	0.68	+2.2
2,043,535	+		PFLU_RS09225	0.85	+0.1
2,043,535	+		PFLU_RS09225	0.85	-0.3
2,043,535	+		PFLU_RS09225	0.85	-2.3
2,043,535	+		PFLU_RS09225	0.85	+2.1
2,043,535	+		PFLU_RS09225	0.85	+2.0
2,043,535	+		PFLU_RS09225	0.85	-0.2
2,043,535	+		PFLU_RS09225	0.85	+0.4
2,043,535	+		PFLU_RS09225	0.85	-2.1
2,043,535	+		PFLU_RS09225	0.85	+1.4
2,043,535	+		PFLU_RS09225	0.85	-2.1
2,043,535	+		PFLU_RS09225	0.85	-0.8
2,043,535	+		PFLU_RS09225	0.85	-0.1
2,043,535	+		PFLU_RS09225	0.85	-2.0
2,043,535	+		PFLU_RS09225	0.85	-3.3
2,043,535	+		PFLU_RS09225	0.85	-0.7
2,043,535	+		PFLU_RS09225	0.85	+1.7
2,043,535	+		PFLU_RS09225	0.85	-1.8
2,043,535	+		PFLU_RS09225	0.85	-0.6
2,043,535	+		PFLU_RS09225	0.85	+0.9
2,043,536	-		PFLU_RS09225	0.85	-0.1
2,043,536	-		PFLU_RS09225	0.85	-2.5
2,043,536	-		PFLU_RS09225	0.85	+1.2
2,043,536	-		PFLU_RS09225	0.85	-0.3
2,043,536	-		PFLU_RS09225	0.85	-0.9
2,043,536	-		PFLU_RS09225	0.85	-0.8
2,043,536	-		PFLU_RS09225	0.85	-0.6
2,043,536	-		PFLU_RS09225	0.85	+0.6
2,043,536	-		PFLU_RS09225	0.85	+0.6
2,043,536	-		PFLU_RS09225	0.85	-1.4
2,043,536	-		PFLU_RS09225	0.85	-3.1
2,043,536	-		PFLU_RS09225	0.85	+1.7
2,043,547	+		PFLU_RS09225	0.86	+1.2
2,043,547	+		PFLU_RS09225	0.86	-1.5
2,043,547	+		PFLU_RS09225	0.86	-2.3
2,043,547	+		PFLU_RS09225	0.86	+1.9
2,043,547	+		PFLU_RS09225	0.86	-0.6
2,043,548	-		PFLU_RS09225	0.86	+0.1
2,043,548	-		PFLU_RS09225	0.86	+1.7
2,043,548	-		PFLU_RS09225	0.86	+0.4
2,043,548	-		PFLU_RS09225	0.86	+2.3
2,043,548	-		PFLU_RS09225	0.86	-0.1
2,043,548	-		PFLU_RS09225	0.86	+0.7
2,043,548	-		PFLU_RS09225	0.86	+0.9
2,043,723	-				+0.3
2,043,725	+				-0.6
2,043,725	+				+0.2
2,043,725	+				-1.9
2,043,725	+				-1.3
2,043,726	-				-1.1
2,043,726	-				-0.9
2,043,726	-				+0.7
2,043,739	+				-1.3
2,043,739	+				-0.3
2,043,828	+		PFLU_RS09230	0.21	-0.2
2,043,829	-		PFLU_RS09230	0.21	+1.8
2,043,829	-		PFLU_RS09230	0.21	+2.3
2,043,829	-		PFLU_RS09230	0.21	-0.2
2,043,829	-		PFLU_RS09230	0.21	+1.2
2,043,829	-		PFLU_RS09230	0.21	+0.2
2,043,829	-		PFLU_RS09230	0.21	-1.3
2,043,871	+		PFLU_RS09230	0.35	-0.3
2,043,882	+		PFLU_RS09230	0.38	+1.0
2,043,882	+		PFLU_RS09230	0.38	-0.8
2,043,883	-		PFLU_RS09230	0.38	-0.9
2,043,883	-		PFLU_RS09230	0.38	+0.8
2,043,883	-		PFLU_RS09230	0.38	+2.1
2,043,883	-		PFLU_RS09230	0.38	+0.1
2,043,937	+		PFLU_RS09230	0.56	-0.9
2,043,945	+		PFLU_RS09230	0.58	+0.8
2,043,945	+		PFLU_RS09230	0.58	-0.6
2,043,971	+		PFLU_RS09230	0.67	-1.8
2,043,972	-		PFLU_RS09230	0.67	+1.0
2,043,991	+		PFLU_RS09230	0.73	+0.4
2,043,991	+		PFLU_RS09230	0.73	-1.6
2,043,991	+		PFLU_RS09230	0.73	-0.8
2,043,991	+		PFLU_RS09230	0.73	-1.0
2,043,991	+		PFLU_RS09230	0.73	-0.6
2,043,991	+		PFLU_RS09230	0.73	-1.0
2,043,991	+		PFLU_RS09230	0.73	-0.1
2,043,991	+		PFLU_RS09230	0.73	+0.7
2,043,992	-		PFLU_RS09230	0.73	+1.1
2,043,992	-		PFLU_RS09230	0.73	+2.1
2,043,992	-		PFLU_RS09230	0.73	-2.0
2,043,992	-		PFLU_RS09230	0.73	+0.5
2,043,992	-		PFLU_RS09230	0.73	-0.3
2,043,992	-		PFLU_RS09230	0.73	-0.8
2,043,992	-		PFLU_RS09230	0.73	+2.7
2,043,992	-		PFLU_RS09230	0.73	-1.5
2,043,992	-		PFLU_RS09230	0.73	-1.1
2,043,992	-		PFLU_RS09230	0.73	-1.1
2,043,992	-		PFLU_RS09230	0.73	-0.7
2,043,992	-		PFLU_RS09230	0.73	-1.9
2,043,992	-		PFLU_RS09230	0.73	-1.3
2,043,992	-		PFLU_RS09230	0.73	-0.3
2,043,992	-		PFLU_RS09230	0.73	+0.1
2,043,992	-		PFLU_RS09230	0.73	-1.1
2,044,078	+				+2.7
2,044,079	-				-1.3
2,044,079	-				-1.3
2,044,121	-				-0.6
2,044,122	+				-2.0
2,044,122	+				+0.9
2,044,126	+				-2.0
2,044,126	+				-1.8
2,044,134	-				+0.7
2,044,141	+				+1.1
2,044,141	+				-1.9
2,044,141	+				-1.3
2,044,141	+				-2.2
2,044,141	+				-3.1
2,044,141	+				-2.4
2,044,141	+				-0.6
2,044,141	+				-0.6
2,044,141	+				+0.5
2,044,141	+				+0.9
2,044,141	+				+0.1
2,044,141	+				-2.6
2,044,141	+				+2.0
2,044,141	+				-0.9
2,044,141	+				-1.2
2,044,141	+				-0.6
2,044,141	+				+1.3
2,044,141	+				+0.0
2,044,142	-				-1.9
2,044,142	-				-0.2
2,044,142	-				-1.3
2,044,142	-				+1.1
2,044,142	-				+1.9
2,044,142	-				-1.1
2,044,142	-				-1.6
2,044,142	-				-0.3
2,044,142	-				+0.7
2,044,142	-				+0.2
2,044,206	+				-0.1
2,044,206	+				+2.7
2,044,206	+				-0.2
2,044,206	+				-0.1
2,044,206	+				-1.5
2,044,206	+				+0.9
2,044,206	+				-0.6
2,044,206	+				-0.3
2,044,206	+				-1.1
2,044,206	+				+1.1
2,044,206	+				+4.1
2,044,206	+				+1.0
2,044,206	+				+0.6
2,044,206	+				-2.2
2,044,206	+				+2.4
2,044,206	+				+0.7
2,044,206	+				-1.1
2,044,206	+				+0.1
2,044,207	-				+0.6
2,044,207	-				+5.2
2,044,207	-				+0.5
2,044,207	-				-1.3
2,044,207	-				+0.8
2,044,207	-				-1.1
2,044,207	-				+2.2
2,044,207	-				-2.0
2,044,207	-				-0.1
2,044,207	-				-0.1
2,044,207	-				-2.2
2,044,207	-				+0.0
2,044,207	-				-0.2
2,044,207	-				+1.1
2,044,207	-				+1.5
2,044,207	-				-1.1
2,044,207	-				+0.7
2,044,208	+				-0.1
2,044,208	+				+0.4
2,044,208	+				+1.9
2,044,208	+				+2.3
2,044,208	+				+0.1
2,044,208	+				-0.3
2,044,208	+				-1.9
2,044,209	-				+0.9
2,044,209	-				-1.5
2,044,209	-				-1.9
2,044,209	-				-0.3
2,044,209	-				-0.8
2,044,209	-				+1.6
2,044,209	-				+0.7
2,044,209	-				+1.0
2,044,375	+		PFLU_RS09235	0.17	+1.9
2,044,376	-		PFLU_RS09235	0.17	-1.9
2,044,376	-		PFLU_RS09235	0.17	+4.4
2,044,404	+		PFLU_RS09235	0.19	+0.8
2,044,404	+		PFLU_RS09235	0.19	+0.1
2,044,404	+		PFLU_RS09235	0.19	+0.5
2,044,404	+		PFLU_RS09235	0.19	+1.1
2,044,404	+		PFLU_RS09235	0.19	+0.4
2,044,404	+		PFLU_RS09235	0.19	+2.4
2,044,404	+		PFLU_RS09235	0.19	+1.9
2,044,404	+		PFLU_RS09235	0.19	+1.2
2,044,405	-		PFLU_RS09235	0.19	-1.6
2,044,405	-		PFLU_RS09235	0.19	-1.2
2,044,405	-		PFLU_RS09235	0.19	+2.5
2,044,405	-		PFLU_RS09235	0.19	+0.4
2,044,484	+		PFLU_RS09235	0.26	-0.4
2,044,576	+		PFLU_RS09235	0.34	+0.2
2,044,577	-		PFLU_RS09235	0.34	-2.1
2,044,782	+		PFLU_RS09235	0.52	+0.6
2,044,782	+		PFLU_RS09235	0.52	-0.8
2,044,782	+		PFLU_RS09235	0.52	+1.2
2,044,782	+		PFLU_RS09235	0.52	+0.2
2,044,782	+		PFLU_RS09235	0.52	-0.1
2,044,782	+		PFLU_RS09235	0.52	+2.0
2,044,782	+		PFLU_RS09235	0.52	+2.3
2,044,782	+		PFLU_RS09235	0.52	+0.8
2,044,782	+		PFLU_RS09235	0.52	-1.1
2,044,782	+		PFLU_RS09235	0.52	-2.0
2,044,782	+		PFLU_RS09235	0.52	+3.3
2,044,783	-		PFLU_RS09235	0.52	-1.3
2,044,783	-		PFLU_RS09235	0.52	+1.1
2,044,783	-		PFLU_RS09235	0.52	-1.0
2,044,856	+		PFLU_RS09235	0.59	+0.6
2,044,856	+		PFLU_RS09235	0.59	-2.0
2,044,856	+		PFLU_RS09235	0.59	-1.8
2,044,856	+		PFLU_RS09235	0.59	-2.4
2,044,857	-		PFLU_RS09235	0.59	-1.2
2,044,857	-		PFLU_RS09235	0.59	+1.1
2,044,857	-		PFLU_RS09235	0.59	-2.5
2,044,857	-		PFLU_RS09235	0.59	-1.7
2,044,857	-		PFLU_RS09235	0.59	+0.4
2,044,857	-		PFLU_RS09235	0.59	-1.8
2,044,857	-		PFLU_RS09235	0.59	+0.9
2,044,857	-		PFLU_RS09235	0.59	+0.2
2,044,857	-		PFLU_RS09235	0.59	-1.3
2,044,857	-		PFLU_RS09235	0.59	+1.2