Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23795

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23785 and BWI76_RS23790 are separated by 52 nucleotidesBWI76_RS23790 and BWI76_RS23795 are separated by 42 nucleotidesBWI76_RS23795 and BWI76_RS23800 are separated by 9 nucleotides BWI76_RS23785: BWI76_RS23785 - hypothetical protein, at 4,965,226 to 4,965,942 _RS23785 BWI76_RS23790: BWI76_RS23790 - isopentenyl-diphosphate Delta-isomerase, at 4,965,995 to 4,966,543 _RS23790 BWI76_RS23795: BWI76_RS23795 - lysine--tRNA ligase, at 4,966,586 to 4,968,103 _RS23795 BWI76_RS23800: BWI76_RS23800 - peptide chain release factor 2, at 4,968,113 to 4,969,141 _RS23800 Position (kb) 4966 4967 4968 4969Strain fitness (log2 ratio) -1 0 1at 4965.688 kb on + strand, within BWI76_RS23785at 4965.711 kb on - strand, within BWI76_RS23785at 4966.034 kb on - strandat 4966.036 kb on + strandat 4966.491 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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4,965,688 + BWI76_RS23785 0.64 -0.2
4,965,711 - BWI76_RS23785 0.68 +0.2
4,966,034 - -1.2
4,966,036 + +1.6
4,966,491 - -0.8

Or see this region's nucleotide sequence