Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23780 and BWI76_RS23785 are separated by 14 nucleotides BWI76_RS23785 and BWI76_RS23790 are separated by 52 nucleotides BWI76_RS23790 and BWI76_RS23795 are separated by 42 nucleotides
BWI76_RS23780: BWI76_RS23780 - aromatic acid decarboxylase, at 4,964,633 to 4,965,211
_RS23780
BWI76_RS23785: BWI76_RS23785 - hypothetical protein, at 4,965,226 to 4,965,942
_RS23785
BWI76_RS23790: BWI76_RS23790 - isopentenyl-diphosphate Delta-isomerase, at 4,965,995 to 4,966,543
_RS23790
BWI76_RS23795: BWI76_RS23795 - lysine--tRNA ligase, at 4,966,586 to 4,968,103
_RS23795
Position (kb) 4965
4966
4967 Strain fitness (log2 ratio) -1
0
1 at 4965.163 kb on + strand at 4965.178 kb on + strand at 4965.244 kb on - strand at 4965.335 kb on - strand, within BWI76_RS23785 at 4965.343 kb on - strand, within BWI76_RS23785 at 4965.358 kb on - strand, within BWI76_RS23785 at 4965.535 kb on - strand, within BWI76_RS23785 at 4965.688 kb on + strand, within BWI76_RS23785 at 4965.711 kb on - strand, within BWI76_RS23785 at 4966.034 kb on - strand at 4966.036 kb on + strand at 4966.491 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 4,965,163 + +0.9 4,965,178 + +0.3 4,965,244 - -0.1 4,965,335 - BWI76_RS23785 0.15 -0.5 4,965,343 - BWI76_RS23785 0.16 -1.7 4,965,358 - BWI76_RS23785 0.18 +1.6 4,965,535 - BWI76_RS23785 0.43 -1.0 4,965,688 + BWI76_RS23785 0.64 -0.2 4,965,711 - BWI76_RS23785 0.68 +0.2 4,966,034 - -1.2 4,966,036 + +1.6 4,966,491 - -0.8
Or see this region's nucleotide sequence