Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23775 and BWI76_RS23780 are separated by 12 nucleotides BWI76_RS23780 and BWI76_RS23785 are separated by 14 nucleotides BWI76_RS23785 and BWI76_RS23790 are separated by 52 nucleotides
BWI76_RS23775: BWI76_RS23775 - 3,4-dihydroxybenzoate decarboxylase, at 4,963,127 to 4,964,620
_RS23775
BWI76_RS23780: BWI76_RS23780 - aromatic acid decarboxylase, at 4,964,633 to 4,965,211
_RS23780
BWI76_RS23785: BWI76_RS23785 - hypothetical protein, at 4,965,226 to 4,965,942
_RS23785
BWI76_RS23790: BWI76_RS23790 - isopentenyl-diphosphate Delta-isomerase, at 4,965,995 to 4,966,543
_RS23790
Position (kb)
4964
4965
4966 Strain fitness (log2 ratio)
-2
-1
0
1 at 4963.877 kb on + strand, within BWI76_RS23775 at 4963.881 kb on + strand, within BWI76_RS23775 at 4963.891 kb on + strand, within BWI76_RS23775 at 4963.899 kb on - strand, within BWI76_RS23775 at 4963.949 kb on + strand, within BWI76_RS23775 at 4963.984 kb on + strand, within BWI76_RS23775 at 4964.088 kb on - strand, within BWI76_RS23775 at 4964.103 kb on + strand, within BWI76_RS23775 at 4964.103 kb on + strand, within BWI76_RS23775 at 4964.164 kb on + strand, within BWI76_RS23775 at 4964.383 kb on + strand, within BWI76_RS23775 at 4964.383 kb on + strand, within BWI76_RS23775 at 4964.383 kb on + strand, within BWI76_RS23775 at 4964.391 kb on - strand, within BWI76_RS23775 at 4964.391 kb on - strand, within BWI76_RS23775 at 4964.391 kb on - strand, within BWI76_RS23775 at 4964.391 kb on - strand, within BWI76_RS23775 at 4964.449 kb on - strand, within BWI76_RS23775 at 4964.454 kb on + strand, within BWI76_RS23775 at 4964.472 kb on + strand at 4964.545 kb on - strand at 4964.583 kb on + strand at 4964.637 kb on - strand at 4964.637 kb on - strand at 4964.657 kb on - strand at 4964.685 kb on + strand at 4964.843 kb on + strand, within BWI76_RS23780 at 4964.848 kb on + strand, within BWI76_RS23780 at 4964.982 kb on + strand, within BWI76_RS23780 at 4965.163 kb on + strand at 4965.178 kb on + strand at 4965.244 kb on - strand at 4965.335 kb on - strand, within BWI76_RS23785 at 4965.343 kb on - strand, within BWI76_RS23785 at 4965.358 kb on - strand, within BWI76_RS23785 at 4965.535 kb on - strand, within BWI76_RS23785 at 4965.688 kb on + strand, within BWI76_RS23785 at 4965.711 kb on - strand, within BWI76_RS23785 at 4966.034 kb on - strand at 4966.036 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 4,963,877 + BWI76_RS23775 0.50 +0.4 4,963,881 + BWI76_RS23775 0.50 -0.1 4,963,891 + BWI76_RS23775 0.51 -0.6 4,963,899 - BWI76_RS23775 0.52 +0.9 4,963,949 + BWI76_RS23775 0.55 -1.2 4,963,984 + BWI76_RS23775 0.57 +0.1 4,964,088 - BWI76_RS23775 0.64 -1.9 4,964,103 + BWI76_RS23775 0.65 -1.0 4,964,103 + BWI76_RS23775 0.65 -1.2 4,964,164 + BWI76_RS23775 0.69 +0.6 4,964,383 + BWI76_RS23775 0.84 +0.9 4,964,383 + BWI76_RS23775 0.84 +0.1 4,964,383 + BWI76_RS23775 0.84 +0.4 4,964,391 - BWI76_RS23775 0.85 -0.2 4,964,391 - BWI76_RS23775 0.85 +1.6 4,964,391 - BWI76_RS23775 0.85 -0.9 4,964,391 - BWI76_RS23775 0.85 +0.2 4,964,449 - BWI76_RS23775 0.88 -0.0 4,964,454 + BWI76_RS23775 0.89 +0.7 4,964,472 + +0.2 4,964,545 - -0.3 4,964,583 + -0.6 4,964,637 - -0.6 4,964,637 - +1.6 4,964,657 - -0.9 4,964,685 + -0.4 4,964,843 + BWI76_RS23780 0.36 +0.1 4,964,848 + BWI76_RS23780 0.37 -1.1 4,964,982 + BWI76_RS23780 0.60 -0.0 4,965,163 + +0.9 4,965,178 + +0.3 4,965,244 - -0.1 4,965,335 - BWI76_RS23785 0.15 -0.5 4,965,343 - BWI76_RS23785 0.16 -1.7 4,965,358 - BWI76_RS23785 0.18 +1.6 4,965,535 - BWI76_RS23785 0.43 -1.0 4,965,688 + BWI76_RS23785 0.64 -0.2 4,965,711 - BWI76_RS23785 0.68 +0.2 4,966,034 - -1.2 4,966,036 + +1.6
Or see this region's nucleotide sequence