Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05250

Experiment: D-Fructose (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBWI76_RS05240 and BWI76_RS05245 are separated by 12 nucleotidesBWI76_RS05245 and BWI76_RS05250 are separated by 11 nucleotidesBWI76_RS05250 and BWI76_RS05255 are separated by 31 nucleotides BWI76_RS05240: BWI76_RS05240 - (2E,6E)-farnesyl- diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase, at 1,102,701 to 1,103,459 _RS05240 BWI76_RS05245: BWI76_RS05245 - phosphatidate cytidylyltransferase, at 1,103,472 to 1,104,329 _RS05245 BWI76_RS05250: BWI76_RS05250 - zinc metallopeptidase RseP, at 1,104,341 to 1,105,693 _RS05250 BWI76_RS05255: BWI76_RS05255 - outer membrane protein assembly factor BamA, at 1,105,725 to 1,108,154 _RS05255 Position (kb) 1104 1105 1106Strain fitness (log2 ratio) -1 0 1at 1104.336 kb on + strandat 1104.336 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
remove
1,104,336 + +0.6
1,104,336 + +0.2

Or see this region's nucleotide sequence