Experiment: NAG (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_19575 and AO353_19580 are separated by 109 nucleotides AO353_19580 and AO353_19585 are separated by 9 nucleotides
AO353_19575: AO353_19575 - dimethylglycine dehydrogenase, at 4,289,047 to 4,289,727
_19575
AO353_19580: AO353_19580 - AraC family transcriptional regulator, at 4,289,837 to 4,290,835
_19580
AO353_19585: AO353_19585 - alpha/beta hydrolase, at 4,290,845 to 4,293,280
_19585
Position (kb)
4289
4290
4291 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.883 kb on + strand at 4289.007 kb on - strand at 4289.017 kb on + strand at 4289.017 kb on + strand at 4289.228 kb on + strand, within AO353_19575 at 4289.229 kb on - strand, within AO353_19575 at 4289.229 kb on - strand, within AO353_19575 at 4289.229 kb on - strand, within AO353_19575 at 4289.229 kb on - strand, within AO353_19575 at 4289.229 kb on - strand, within AO353_19575 at 4289.338 kb on + strand, within AO353_19575 at 4289.339 kb on - strand, within AO353_19575 at 4289.339 kb on - strand, within AO353_19575 at 4289.339 kb on - strand, within AO353_19575 at 4289.339 kb on - strand, within AO353_19575 at 4289.339 kb on - strand, within AO353_19575 at 4289.339 kb on - strand, within AO353_19575 at 4289.357 kb on + strand, within AO353_19575 at 4289.357 kb on + strand, within AO353_19575 at 4289.357 kb on + strand, within AO353_19575 at 4289.357 kb on + strand, within AO353_19575 at 4289.358 kb on - strand, within AO353_19575 at 4289.358 kb on - strand, within AO353_19575 at 4289.358 kb on - strand, within AO353_19575 at 4289.358 kb on - strand, within AO353_19575 at 4289.441 kb on + strand, within AO353_19575 at 4289.441 kb on + strand, within AO353_19575 at 4289.441 kb on + strand, within AO353_19575 at 4289.442 kb on - strand, within AO353_19575 at 4289.635 kb on + strand, within AO353_19575 at 4289.635 kb on + strand, within AO353_19575 at 4289.635 kb on + strand, within AO353_19575 at 4289.636 kb on - strand, within AO353_19575 at 4289.663 kb on + strand at 4289.663 kb on + strand at 4289.663 kb on + strand at 4289.663 kb on + strand at 4289.663 kb on + strand at 4289.663 kb on + strand at 4289.663 kb on + strand at 4289.663 kb on + strand at 4289.663 kb on + strand at 4289.663 kb on + strand at 4289.664 kb on - strand at 4289.664 kb on - strand at 4289.664 kb on - strand at 4289.733 kb on + strand at 4289.734 kb on - strand at 4289.763 kb on - strand at 4289.784 kb on + strand at 4289.784 kb on + strand at 4289.784 kb on + strand at 4289.785 kb on - strand at 4289.785 kb on - strand at 4289.785 kb on - strand at 4289.785 kb on - strand at 4289.785 kb on - strand at 4289.804 kb on + strand at 4289.806 kb on + strand at 4289.806 kb on + strand at 4289.806 kb on + strand at 4289.807 kb on - strand at 4289.956 kb on - strand, within AO353_19580 at 4290.092 kb on + strand, within AO353_19580 at 4290.092 kb on + strand, within AO353_19580 at 4290.092 kb on + strand, within AO353_19580 at 4290.092 kb on + strand, within AO353_19580 at 4290.093 kb on - strand, within AO353_19580 at 4290.186 kb on + strand, within AO353_19580 at 4290.298 kb on + strand, within AO353_19580 at 4290.299 kb on - strand, within AO353_19580 at 4290.334 kb on + strand, within AO353_19580 at 4290.742 kb on + strand at 4290.742 kb on + strand at 4290.742 kb on + strand at 4290.833 kb on + strand at 4290.833 kb on + strand at 4290.833 kb on + strand at 4290.833 kb on + strand at 4290.833 kb on + strand at 4290.833 kb on + strand at 4290.833 kb on + strand at 4290.833 kb on + strand at 4290.833 kb on + strand at 4290.834 kb on - strand at 4290.834 kb on - strand at 4290.834 kb on - strand at 4290.834 kb on - strand at 4290.834 kb on - strand at 4290.834 kb on - strand at 4290.834 kb on - strand at 4290.834 kb on - strand at 4290.834 kb on - strand at 4290.846 kb on + strand at 4290.847 kb on - strand at 4290.847 kb on - strand at 4291.011 kb on + strand at 4291.012 kb on - strand at 4291.089 kb on + strand, within AO353_19585 at 4291.089 kb on + strand, within AO353_19585 at 4291.272 kb on + strand, within AO353_19585 at 4291.272 kb on + strand, within AO353_19585 at 4291.272 kb on + strand, within AO353_19585 at 4291.272 kb on + strand, within AO353_19585 at 4291.273 kb on - strand, within AO353_19585 at 4291.273 kb on - strand, within AO353_19585 at 4291.273 kb on - strand, within AO353_19585 at 4291.275 kb on + strand, within AO353_19585 at 4291.431 kb on + strand, within AO353_19585 at 4291.431 kb on + strand, within AO353_19585 at 4291.431 kb on + strand, within AO353_19585 at 4291.431 kb on + strand, within AO353_19585 at 4291.431 kb on + strand, within AO353_19585 at 4291.431 kb on + strand, within AO353_19585 at 4291.431 kb on + strand, within AO353_19585 at 4291.432 kb on - strand, within AO353_19585 at 4291.432 kb on - strand, within AO353_19585 at 4291.432 kb on - strand, within AO353_19585 at 4291.518 kb on + strand, within AO353_19585 at 4291.518 kb on + strand, within AO353_19585 at 4291.518 kb on + strand, within AO353_19585 at 4291.518 kb on + strand, within AO353_19585 at 4291.518 kb on + strand, within AO353_19585 at 4291.518 kb on + strand, within AO353_19585 at 4291.518 kb on + strand, within AO353_19585 at 4291.518 kb on + strand, within AO353_19585 at 4291.518 kb on + strand, within AO353_19585 at 4291.519 kb on - strand, within AO353_19585 at 4291.519 kb on - strand, within AO353_19585 at 4291.519 kb on - strand, within AO353_19585 at 4291.648 kb on + strand, within AO353_19585 at 4291.649 kb on - strand, within AO353_19585 at 4291.732 kb on - strand, within AO353_19585 at 4291.732 kb on - strand, within AO353_19585 at 4291.732 kb on - strand, within AO353_19585 at 4291.789 kb on + strand, within AO353_19585 at 4291.789 kb on + strand, within AO353_19585 at 4291.791 kb on + strand, within AO353_19585 at 4291.791 kb on + strand, within AO353_19585 at 4291.791 kb on + strand, within AO353_19585 at 4291.791 kb on + strand, within AO353_19585 at 4291.791 kb on + strand, within AO353_19585 at 4291.791 kb on + strand, within AO353_19585 at 4291.791 kb on + strand, within AO353_19585 at 4291.792 kb on - strand, within AO353_19585 at 4291.792 kb on - strand, within AO353_19585 at 4291.792 kb on - strand, within AO353_19585 at 4291.792 kb on - strand, within AO353_19585 at 4291.792 kb on - strand, within AO353_19585 at 4291.792 kb on - strand, within AO353_19585 at 4291.792 kb on - strand, within AO353_19585
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (N) remove 4,288,851 + +1.0 4,288,851 + +0.0 4,288,851 + -0.8 4,288,851 + -2.0 4,288,851 + -0.1 4,288,851 + +0.4 4,288,851 + -0.5 4,288,851 + +0.1 4,288,851 + +0.9 4,288,851 + +0.6 4,288,851 + +0.9 4,288,851 + +0.4 4,288,851 + -0.4 4,288,851 + -0.2 4,288,851 + +0.1 4,288,851 + -1.2 4,288,852 - +0.6 4,288,852 - -1.0 4,288,852 - +0.5 4,288,852 - -0.5 4,288,852 - -0.5 4,288,852 - +0.1 4,288,852 - +0.0 4,288,852 - +0.5 4,288,852 - +1.0 4,288,852 - -0.4 4,288,852 - +1.2 4,288,852 - -0.3 4,288,852 - +0.1 4,288,883 + -0.6 4,289,007 - -0.4 4,289,017 + -0.7 4,289,017 + -0.8 4,289,228 + AO353_19575 0.27 -1.0 4,289,229 - AO353_19575 0.27 +0.5 4,289,229 - AO353_19575 0.27 -1.5 4,289,229 - AO353_19575 0.27 +1.0 4,289,229 - AO353_19575 0.27 -0.3 4,289,229 - AO353_19575 0.27 -2.0 4,289,338 + AO353_19575 0.43 +0.7 4,289,339 - AO353_19575 0.43 +0.2 4,289,339 - AO353_19575 0.43 +0.5 4,289,339 - AO353_19575 0.43 +2.8 4,289,339 - AO353_19575 0.43 -0.0 4,289,339 - AO353_19575 0.43 +0.3 4,289,339 - AO353_19575 0.43 +1.0 4,289,357 + AO353_19575 0.46 -1.3 4,289,357 + AO353_19575 0.46 +0.0 4,289,357 + AO353_19575 0.46 +2.5 4,289,357 + AO353_19575 0.46 +1.2 4,289,358 - AO353_19575 0.46 -1.9 4,289,358 - AO353_19575 0.46 +0.0 4,289,358 - AO353_19575 0.46 +1.4 4,289,358 - AO353_19575 0.46 -1.0 4,289,441 + AO353_19575 0.58 +1.1 4,289,441 + AO353_19575 0.58 +0.2 4,289,441 + AO353_19575 0.58 +1.1 4,289,442 - AO353_19575 0.58 +0.8 4,289,635 + AO353_19575 0.86 -1.7 4,289,635 + AO353_19575 0.86 -0.5 4,289,635 + AO353_19575 0.86 +0.3 4,289,636 - AO353_19575 0.86 -0.4 4,289,663 + +0.4 4,289,663 + -0.5 4,289,663 + -1.2 4,289,663 + +0.5 4,289,663 + +0.6 4,289,663 + -1.4 4,289,663 + -0.3 4,289,663 + -0.3 4,289,663 + +0.3 4,289,663 + +1.5 4,289,664 - -0.4 4,289,664 - -0.4 4,289,664 - +0.3 4,289,733 + -0.2 4,289,734 - -0.2 4,289,763 - -1.5 4,289,784 + -0.1 4,289,784 + -1.2 4,289,784 + -0.8 4,289,785 - +0.5 4,289,785 - -1.2 4,289,785 - -0.1 4,289,785 - +2.0 4,289,785 - -0.3 4,289,804 + +0.6 4,289,806 + -0.8 4,289,806 + -0.4 4,289,806 + +0.5 4,289,807 - +0.4 4,289,956 - AO353_19580 0.12 -0.0 4,290,092 + AO353_19580 0.26 -0.2 4,290,092 + AO353_19580 0.26 -0.0 4,290,092 + AO353_19580 0.26 +0.8 4,290,092 + AO353_19580 0.26 -1.9 4,290,093 - AO353_19580 0.26 -0.7 4,290,186 + AO353_19580 0.35 +0.7 4,290,298 + AO353_19580 0.46 +0.4 4,290,299 - AO353_19580 0.46 -0.8 4,290,334 + AO353_19580 0.50 +1.6 4,290,742 + +1.3 4,290,742 + +0.2 4,290,742 + +0.9 4,290,833 + +0.1 4,290,833 + -0.3 4,290,833 + +0.6 4,290,833 + -1.4 4,290,833 + +0.4 4,290,833 + +0.8 4,290,833 + +0.1 4,290,833 + -0.1 4,290,833 + -0.6 4,290,834 - +0.5 4,290,834 - +1.3 4,290,834 - -1.0 4,290,834 - +0.7 4,290,834 - +1.2 4,290,834 - -1.3 4,290,834 - -0.5 4,290,834 - +1.0 4,290,834 - -1.0 4,290,846 + -0.9 4,290,847 - +0.7 4,290,847 - -0.3 4,291,011 + +0.6 4,291,012 - -1.1 4,291,089 + AO353_19585 0.10 -0.9 4,291,089 + AO353_19585 0.10 -0.8 4,291,272 + AO353_19585 0.18 +1.3 4,291,272 + AO353_19585 0.18 -0.0 4,291,272 + AO353_19585 0.18 -0.1 4,291,272 + AO353_19585 0.18 -0.1 4,291,273 - AO353_19585 0.18 -0.7 4,291,273 - AO353_19585 0.18 -0.4 4,291,273 - AO353_19585 0.18 -0.7 4,291,275 + AO353_19585 0.18 +1.0 4,291,431 + AO353_19585 0.24 -0.4 4,291,431 + AO353_19585 0.24 -0.5 4,291,431 + AO353_19585 0.24 -0.7 4,291,431 + AO353_19585 0.24 -0.2 4,291,431 + AO353_19585 0.24 +0.1 4,291,431 + AO353_19585 0.24 -0.5 4,291,431 + AO353_19585 0.24 -0.7 4,291,432 - AO353_19585 0.24 -1.2 4,291,432 - AO353_19585 0.24 -1.2 4,291,432 - AO353_19585 0.24 +0.2 4,291,518 + AO353_19585 0.28 +0.1 4,291,518 + AO353_19585 0.28 +0.6 4,291,518 + AO353_19585 0.28 -0.4 4,291,518 + AO353_19585 0.28 +0.3 4,291,518 + AO353_19585 0.28 -0.6 4,291,518 + AO353_19585 0.28 -0.8 4,291,518 + AO353_19585 0.28 -0.7 4,291,518 + AO353_19585 0.28 -0.5 4,291,518 + AO353_19585 0.28 +1.0 4,291,519 - AO353_19585 0.28 -0.7 4,291,519 - AO353_19585 0.28 -2.6 4,291,519 - AO353_19585 0.28 +0.8 4,291,648 + AO353_19585 0.33 -0.4 4,291,649 - AO353_19585 0.33 -0.1 4,291,732 - AO353_19585 0.36 +1.5 4,291,732 - AO353_19585 0.36 +0.5 4,291,732 - AO353_19585 0.36 -0.2 4,291,789 + AO353_19585 0.39 +0.0 4,291,789 + AO353_19585 0.39 +0.0 4,291,791 + AO353_19585 0.39 -0.1 4,291,791 + AO353_19585 0.39 -0.4 4,291,791 + AO353_19585 0.39 -0.3 4,291,791 + AO353_19585 0.39 +1.0 4,291,791 + AO353_19585 0.39 -1.0 4,291,791 + AO353_19585 0.39 +1.4 4,291,791 + AO353_19585 0.39 +0.9 4,291,792 - AO353_19585 0.39 +0.9 4,291,792 - AO353_19585 0.39 -1.0 4,291,792 - AO353_19585 0.39 -1.7 4,291,792 - AO353_19585 0.39 +0.5 4,291,792 - AO353_19585 0.39 -1.4 4,291,792 - AO353_19585 0.39 +1.2 4,291,792 - AO353_19585 0.39 +0.9
Or see this region's nucleotide sequence