Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2910

Experiment: Minimal media pH9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH9
3,266,160	-				+1.2
3,266,229	+				-2.5
3,266,229	+				-0.1
3,266,230	-				-1.4
3,266,230	-				+1.4
3,266,319	-				+0.7
3,266,319	-				+0.6
3,266,319	-				+1.2
3,266,353	+				-1.4
3,266,354	-				-0.4
3,266,397	+				-0.0
3,266,397	+				+1.6
3,266,398	-				-0.6
3,266,555	+				+0.5
3,266,597	+				+0.4
3,266,598	-				-1.4
3,266,709	+		Pf1N1B4_2910	0.12	-0.6
3,266,730	+				+1.6
3,266,730	+		Pf1N1B4_2910	0.13	-1.9
3,266,730	+		Pf1N1B4_2910	0.13	-1.7
3,266,730	+		Pf1N1B4_2910	0.13	-0.7
3,266,731	-		Pf1N1B4_2910	0.13	-1.1
3,266,731	-		Pf1N1B4_2910	0.13	-1.9
3,267,169	-		Pf1N1B4_2910	0.49	-1.5
3,267,256	+		Pf1N1B4_2910	0.56	-1.6
3,267,285	+		Pf1N1B4_2910	0.59	+0.9
3,267,285	+		Pf1N1B4_2910	0.59	-1.6
3,267,285	+		Pf1N1B4_2910	0.59	-0.1
3,267,285	+		Pf1N1B4_2910	0.59	-1.4
3,267,285	+				-0.6
3,267,286	-		Pf1N1B4_2910	0.59	-0.1
3,267,286	-				+0.2
3,267,291	+		Pf1N1B4_2910	0.59	-0.0
3,267,291	+		Pf1N1B4_2910	0.59	-0.9
3,267,291	+		Pf1N1B4_2910	0.59	-3.1
3,267,291	+		Pf1N1B4_2910	0.59	-0.4
3,267,292	-		Pf1N1B4_2910	0.59	-1.4
3,267,292	-		Pf1N1B4_2910	0.59	+1.1
3,267,292	-		Pf1N1B4_2910	0.59	+0.3
3,267,312	+		Pf1N1B4_2910	0.61	+2.7
3,267,312	+				+0.4
3,267,313	-		Pf1N1B4_2910	0.61	-0.4
3,267,313	-		Pf1N1B4_2910	0.61	-0.9
3,267,325	-		Pf1N1B4_2910	0.62	-0.9
3,267,325	-		Pf1N1B4_2910	0.62	+2.4
3,267,582	+				+0.5
3,267,582	+		Pf1N1B4_2910	0.83	+0.5
3,267,582	+				+2.6
3,267,582	+		Pf1N1B4_2910	0.83	-2.4
3,267,582	+		Pf1N1B4_2910	0.83	-1.6
3,267,583	-		Pf1N1B4_2910	0.83	-1.3
3,267,583	-		Pf1N1B4_2910	0.83	-2.2
3,267,583	-		Pf1N1B4_2910	0.83	+0.1
3,267,583	-		Pf1N1B4_2910	0.83	+0.1
3,267,673	+				-0.9
3,267,673	+				+1.2
3,267,673	+				+0.5
3,267,674	-				-1.9
3,267,708	+				-1.2
3,267,708	+				-0.1
3,267,708	+				-1.2
3,267,708	+				+0.1
3,267,708	+				-0.9
3,267,708	+				+0.1
3,267,708	+				-1.4
3,267,708	+				-1.7
3,267,709	-				-0.8
3,267,709	-				-1.2
3,267,709	-				-0.9
3,267,709	-				-2.9
3,267,709	-				+3.2
3,267,714	+				-2.5
3,267,714	+				+0.3
3,267,714	+				+0.8
3,267,714	+				-1.7
3,267,714	+				-2.1
3,267,715	-				+1.2
3,267,715	-				-0.1
3,267,818	+				-1.5
3,267,818	+				+1.6
3,267,818	+				-1.9
3,267,818	+				-1.8
3,267,818	+				-0.7
3,267,818	+				+2.4
3,267,818	+				-0.5
3,267,818	+				+0.2
3,267,818	+				-0.3
3,267,819	-				-0.5
3,267,819	-				-2.6
3,267,819	-				-1.5
3,267,819	-				+0.9
3,267,819	-				+0.9
3,267,819	-				-1.0
3,267,820	+				+0.4
3,267,820	+				+0.2
3,267,820	+				-0.1
3,267,820	+				+0.1
3,267,820	+				-0.8
3,267,820	+				-2.5
3,267,820	+				-0.6
3,267,820	+				+0.2
3,267,820	+				+2.2
3,267,820	+				-0.1
3,267,820	+				-1.5
3,267,820	+				+1.0
3,267,820	+				+0.3
3,267,820	+				+0.3
3,267,820	+				-0.7
3,267,820	+				-0.9
3,267,820	+				+1.3
3,267,820	+				+0.6
3,267,820	+				-3.0
3,267,820	+				+0.6
3,267,820	+				-2.7
3,267,820	+				-0.0
3,267,820	+				+1.6
3,267,820	+				-1.1
3,267,820	+				-0.7
3,267,820	+				+1.1
3,267,820	+				-0.7
3,267,820	+				+0.5
3,267,820	+				+0.9
3,267,820	+				+2.2
3,267,820	+				-0.3
3,267,820	+				-2.3
3,267,820	+				+0.5
3,267,820	+				+0.2
3,267,820	+				-2.6
3,267,820	+				+1.4
3,267,820	+				-2.3
3,267,820	+				+0.9
3,267,820	+				+1.6
3,267,820	+				+0.2
3,267,820	+				-1.7
3,267,820	+				-1.3
3,267,820	+				+2.1
3,267,820	+				-0.8
3,267,820	+				-0.3
3,267,820	+				+1.3
3,267,820	+				-0.7
3,267,820	+				-2.2
3,267,820	+				-1.6
3,267,820	+				+1.7
3,267,821	-				+0.1
3,267,821	-				+0.4
3,267,821	-				-0.2
3,267,821	-				+0.7
3,267,821	-				+0.6
3,267,821	-				+0.4
3,267,821	-				-0.2
3,267,821	-				-1.7
3,267,821	-				-1.0
3,267,821	-				-0.6
3,267,821	-				+1.0
3,267,821	-				-2.0
3,267,821	-				+2.2
3,267,821	-				-0.3
3,267,821	-				+0.7
3,267,821	-				-0.3
3,267,821	-				+0.3
3,267,821	-				-1.3
3,267,821	-				-1.0
3,267,821	-				-1.0
3,267,821	-				-0.4
3,267,821	-				+2.1
3,267,821	-				-1.8
3,267,821	-				+0.6
3,267,821	-				+0.5
3,267,821	-				-1.1
3,267,821	-				-0.3
3,267,821	-				+1.8
3,267,821	-				-1.3
3,267,821	-				-0.8
3,267,821	-				+0.1
3,267,821	-				+0.9
3,267,821	-				-1.3
3,267,821	-				-1.1
3,267,821	-				-1.3
3,267,824	+				-0.6
3,267,824	+				+0.5
3,267,824	+				-1.1
3,267,824	+				-0.2
3,267,824	+				+1.1
3,267,824	+				+1.2
3,267,824	+				+3.7
3,267,824	+				+1.9
3,267,824	+				+1.1
3,267,824	+				-0.8
3,267,824	+				-0.7
3,267,825	-				+0.8
3,267,825	-				-1.2
3,267,825	-				+1.5
3,267,862	+				-0.0
3,267,862	+				+0.6
3,267,862	+				-3.6
3,267,863	-				-0.2
3,267,863	-				+1.0
3,267,863	-				+0.1
3,267,867	+				-1.5
3,267,867	+				-1.7
3,267,867	+				-1.2
3,267,868	-				+0.1
3,267,938	-		Pf1N1B4_2911	0.14	+1.1
3,267,938	-		Pf1N1B4_2911	0.14	-2.2
3,268,030	+		Pf1N1B4_2911	0.23	+0.9
3,268,030	+		Pf1N1B4_2911	0.23	+1.2
3,268,031	-		Pf1N1B4_2911	0.23	-1.6
3,268,031	-		Pf1N1B4_2911	0.23	+0.2
3,268,031	-		Pf1N1B4_2911	0.23	-1.5
3,268,031	-		Pf1N1B4_2911	0.23	+1.4
3,268,094	+		Pf1N1B4_2911	0.29	-1.0
3,268,094	+				-0.9
3,268,113	+		Pf1N1B4_2911	0.31	-0.4
3,268,113	+		Pf1N1B4_2911	0.31	-1.7
3,268,114	-		Pf1N1B4_2911	0.31	-0.4
3,268,114	-		Pf1N1B4_2911	0.31	-0.3
3,268,114	-		Pf1N1B4_2911	0.31	+0.2
3,268,154	+		Pf1N1B4_2911	0.35	+0.8
3,268,243	+		Pf1N1B4_2911	0.44	-1.3
3,268,281	+		Pf1N1B4_2911	0.47	-0.3
3,268,281	+		Pf1N1B4_2911	0.47	-1.7
3,268,282	-		Pf1N1B4_2911	0.47	-1.5
3,268,304	-		Pf1N1B4_2911	0.50	-1.5
3,268,318	+		Pf1N1B4_2911	0.51	+0.3
3,268,318	+				+2.0
3,268,318	+		Pf1N1B4_2911	0.51	-0.6
3,268,319	-		Pf1N1B4_2911	0.51	-0.3
3,268,319	-		Pf1N1B4_2911	0.51	-0.4
3,268,319	-		Pf1N1B4_2911	0.51	-2.1
3,268,319	-		Pf1N1B4_2911	0.51	-1.0
3,268,346	+		Pf1N1B4_2911	0.54	-1.3
3,268,346	+		Pf1N1B4_2911	0.54	-0.9
3,268,347	-		Pf1N1B4_2911	0.54	+0.1
3,268,352	-		Pf1N1B4_2911	0.54	+1.2
3,268,352	-		Pf1N1B4_2911	0.54	+0.2
3,268,352	-				-1.2
3,268,352	-		Pf1N1B4_2911	0.54	-0.5
3,268,352	-		Pf1N1B4_2911	0.54	-0.1
3,268,472	+		Pf1N1B4_2911	0.66	-0.6
3,268,472	+		Pf1N1B4_2911	0.66	-1.3
3,268,472	+		Pf1N1B4_2911	0.66	-3.0
3,268,489	+		Pf1N1B4_2911	0.68	-0.5
3,268,489	+		Pf1N1B4_2911	0.68	-2.0
3,268,490	-		Pf1N1B4_2911	0.68	-1.3
3,268,609	-		Pf1N1B4_2911	0.80	+0.4
3,268,648	+		Pf1N1B4_2911	0.84	+0.9
3,268,648	+		Pf1N1B4_2911	0.84	-0.6
3,268,648	+		Pf1N1B4_2911	0.84	-1.5
3,268,648	+		Pf1N1B4_2911	0.84	+0.1
3,268,648	+		Pf1N1B4_2911	0.84	+0.1
3,268,648	+		Pf1N1B4_2911	0.84	-1.9
3,268,648	+		Pf1N1B4_2911	0.84	+1.1
3,268,648	+		Pf1N1B4_2911	0.84	-0.6
3,268,648	+				-1.1
3,268,648	+		Pf1N1B4_2911	0.84	-1.3
3,268,648	+		Pf1N1B4_2911	0.84	-2.0
3,268,649	-		Pf1N1B4_2911	0.84	+0.7
3,268,649	-		Pf1N1B4_2911	0.84	+0.4
3,268,649	-		Pf1N1B4_2911	0.84	+0.2
3,268,649	-		Pf1N1B4_2911	0.84	+0.3
3,268,649	-		Pf1N1B4_2911	0.84	+1.4
3,268,649	-		Pf1N1B4_2911	0.84	-0.7
3,268,649	-				+1.2
3,268,714	+				+0.2
3,268,714	+				+1.1
3,268,715	-				-1.1
3,268,715	-				+0.3
3,268,715	-				+0.5
3,268,715	-				+1.2