Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2908

Experiment: Minimal media pH9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH9
3,262,174	+				-0.6
3,262,191	+				+2.4
3,262,207	-				-0.8
3,262,249	+				-0.4
3,262,250	-				-1.9
3,262,399	+				-1.8
3,262,399	+				+0.1
3,262,399	+				-2.2
3,262,400	-				-1.1
3,262,479	+				-0.4
3,262,479	+				+0.2
3,262,479	+				-2.2
3,262,480	-				-0.2
3,262,480	-				-0.6
3,262,483	-				-1.8
3,262,540	+				-0.6
3,262,541	-				-2.1
3,262,541	-				-0.6
3,262,544	+				+0.5
3,262,544	+				+0.5
3,262,544	+				+0.6
3,262,545	-				-1.8
3,262,587	+				-1.6
3,262,588	-				+1.0
3,262,588	-				-0.9
3,262,588	-				-1.6
3,262,588	-				-0.2
3,262,608	-				-0.8
3,262,645	+		Pf1N1B4_2907	0.17	-0.1
3,262,646	-		Pf1N1B4_2907	0.18	+0.9
3,262,654	+		Pf1N1B4_2907	0.21	+1.0
3,262,673	+		Pf1N1B4_2907	0.29	+2.4
3,262,687	+		Pf1N1B4_2907	0.34	-2.5
3,262,702	+				+3.4
3,262,702	+		Pf1N1B4_2907	0.40	-0.8
3,262,702	+		Pf1N1B4_2907	0.40	-1.6
3,262,702	+		Pf1N1B4_2907	0.40	-0.2
3,262,702	+		Pf1N1B4_2907	0.40	-1.6
3,262,702	+		Pf1N1B4_2907	0.40	-1.3
3,262,702	+		Pf1N1B4_2907	0.40	-1.8
3,262,702	+		Pf1N1B4_2907	0.40	+0.2
3,262,703	-		Pf1N1B4_2907	0.41	+0.8
3,262,703	-		Pf1N1B4_2907	0.41	-0.9
3,262,703	-		Pf1N1B4_2907	0.41	+0.2
3,262,703	-		Pf1N1B4_2907	0.41	-0.5
3,262,703	-		Pf1N1B4_2907	0.41	+0.6
3,262,703	-		Pf1N1B4_2907	0.41	-1.1
3,262,703	-		Pf1N1B4_2907	0.41	-0.9
3,262,703	-		Pf1N1B4_2907	0.41	-0.7
3,262,734	+		Pf1N1B4_2907	0.53	-0.7
3,262,734	+				+0.2
3,262,734	+		Pf1N1B4_2907	0.53	+2.1
3,262,735	-		Pf1N1B4_2907	0.53	+0.6
3,262,735	-		Pf1N1B4_2907	0.53	-1.4
3,262,735	-		Pf1N1B4_2907	0.53	-0.3
3,262,735	-		Pf1N1B4_2907	0.53	-0.9
3,262,779	+		Pf1N1B4_2907	0.71	-0.7
3,262,906	-				-0.8
3,262,906	-				-0.8
3,262,933	-				-0.3
3,262,941	-				+1.4
3,262,971	+				-0.4
3,262,971	+				+0.1
3,262,971	+				-0.4
3,262,971	+				+0.3
3,262,971	+				-2.8
3,262,971	+				+1.0
3,262,971	+				+0.6
3,262,972	-				+0.1
3,262,972	-				-1.4
3,262,972	-				-1.0
3,262,972	-				-0.6
3,262,972	-				+0.6
3,262,972	-				-1.4
3,263,056	+				-1.8
3,263,056	+				+0.2
3,263,057	-				-0.9
3,263,057	-				-1.1
3,263,057	-				-1.0
3,263,096	+				+0.8
3,263,097	-				-0.5
3,263,137	+				+2.7
3,263,191	+				+0.2
3,263,192	-				+1.0
3,263,278	+		Pf1N1B4_2908	0.20	-1.7
3,263,279	-		Pf1N1B4_2908	0.21	-0.6
3,263,279	-				+0.6
3,263,293	+		Pf1N1B4_2908	0.23	+1.4
3,263,366	+		Pf1N1B4_2908	0.33	+0.6
3,263,366	+		Pf1N1B4_2908	0.33	-0.6
3,263,366	+		Pf1N1B4_2908	0.33	-0.1
3,263,366	+		Pf1N1B4_2908	0.33	+1.0
3,263,366	+		Pf1N1B4_2908	0.33	-0.9
3,263,367	-		Pf1N1B4_2908	0.33	+1.6
3,263,367	-		Pf1N1B4_2908	0.33	+2.1
3,263,370	+		Pf1N1B4_2908	0.34	-0.8
3,263,370	+		Pf1N1B4_2908	0.34	-0.4
3,263,370	+		Pf1N1B4_2908	0.34	-1.1
3,263,370	+		Pf1N1B4_2908	0.34	+1.5
3,263,370	+		Pf1N1B4_2908	0.34	-0.1
3,263,370	+		Pf1N1B4_2908	0.34	-0.9
3,263,371	-		Pf1N1B4_2908	0.34	-1.9
3,263,371	-		Pf1N1B4_2908	0.34	-1.4
3,263,371	-		Pf1N1B4_2908	0.34	+0.8
3,263,371	-		Pf1N1B4_2908	0.34	+0.0
3,263,371	-		Pf1N1B4_2908	0.34	-0.4
3,263,371	-		Pf1N1B4_2908	0.34	-2.2
3,263,383	+		Pf1N1B4_2908	0.36	-1.6
3,263,384	-		Pf1N1B4_2908	0.36	-0.9
3,263,523	+				+0.2
3,263,523	+		Pf1N1B4_2908	0.56	-1.1
3,263,523	+		Pf1N1B4_2908	0.56	+0.7
3,263,524	-		Pf1N1B4_2908	0.56	+2.1
3,263,524	-		Pf1N1B4_2908	0.56	+0.8
3,263,524	-		Pf1N1B4_2908	0.56	-1.4
3,263,524	-		Pf1N1B4_2908	0.56	+1.6
3,263,524	-		Pf1N1B4_2908	0.56	+0.1
3,263,524	-		Pf1N1B4_2908	0.56	+1.1
3,263,541	-		Pf1N1B4_2908	0.58	+0.5
3,263,541	-		Pf1N1B4_2908	0.58	+0.9
3,263,541	-		Pf1N1B4_2908	0.58	-1.5
3,263,589	+		Pf1N1B4_2908	0.65	-0.4
3,263,589	+		Pf1N1B4_2908	0.65	+1.6
3,263,678	+		Pf1N1B4_2908	0.78	-1.1
3,263,678	+		Pf1N1B4_2908	0.78	+3.8
3,263,678	+		Pf1N1B4_2908	0.78	-0.2
3,263,678	+		Pf1N1B4_2908	0.78	-1.7
3,263,680	+		Pf1N1B4_2908	0.78	+0.1
3,263,680	+		Pf1N1B4_2908	0.78	-0.3
3,263,681	-		Pf1N1B4_2908	0.79	-0.9
3,263,708	+		Pf1N1B4_2908	0.83	+1.8
3,263,709	-		Pf1N1B4_2908	0.83	-1.8
3,263,725	+		Pf1N1B4_2908	0.85	+0.3
3,263,725	+		Pf1N1B4_2908	0.85	-0.1
3,263,726	-		Pf1N1B4_2908	0.85	+1.2
3,263,742	+		Pf1N1B4_2908	0.87	+1.5
3,263,742	+		Pf1N1B4_2908	0.87	-1.2
3,263,742	+		Pf1N1B4_2908	0.87	-1.1
3,263,743	-				+0.4
3,263,752	+		Pf1N1B4_2908	0.89	+0.0
3,263,752	+		Pf1N1B4_2908	0.89	-1.2
3,263,753	-		Pf1N1B4_2908	0.89	-1.5
3,263,753	-		Pf1N1B4_2908	0.89	-0.2
3,263,753	-				+1.6
3,263,753	-		Pf1N1B4_2908	0.89	-0.7
3,263,753	-		Pf1N1B4_2908	0.89	-0.9
3,263,781	+				-1.2
3,263,782	-				+0.9
3,263,834	+				-1.7
3,263,835	-				-0.1
3,263,835	-				-0.9
3,263,855	-				-2.4
3,263,864	+				-0.2
3,263,864	+				-1.4
3,263,864	+				-0.1
3,263,864	+				-1.6
3,263,864	+				-1.9
3,263,864	+				-0.5
3,263,864	+				+1.1
3,263,864	+				-0.9
3,263,864	+				-0.1
3,263,864	+				-1.6
3,263,864	+				-2.3
3,263,864	+				+1.9
3,263,864	+				+1.2
3,263,865	-				-2.2
3,263,865	-				-0.6
3,263,865	-				-0.5
3,263,865	-				-1.6
3,263,865	-				-0.3
3,263,865	-				-1.8
3,263,865	-				+1.4
3,263,865	-				-0.1
3,263,865	-				-0.3
3,263,865	-				+0.8
3,263,865	-				-0.2
3,263,865	-				+0.1
3,263,876	-				-0.8
3,263,915	+				+0.2
3,263,915	+				-1.3
3,263,916	-				-1.7
3,263,916	-				-1.6
3,263,916	-				-1.4
3,263,916	-				-1.4
3,263,919	+				+1.0
3,263,919	+				-1.4
3,263,919	+				+1.9
3,263,962	-				+1.4
3,263,962	-				+2.2
3,263,962	-				-1.5
3,264,125	-				-1.1
3,264,228	-				-0.5
3,264,282	+				+0.8
3,264,282	+				-0.4
3,264,282	+				+0.1
3,264,282	+				-0.9
3,264,282	+				-0.6
3,264,282	+				-0.9
3,264,282	+				+0.2
3,264,282	+				-0.6
3,264,283	-				+1.5
3,264,283	-				-1.4
3,264,283	-				+0.2
3,264,283	-				+0.3
3,264,283	-				-0.9
3,264,776	+		Pf1N1B4_2909	0.29	+0.2
3,264,777	-		Pf1N1B4_2909	0.29	-0.9