Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1879

Experiment: Minimal media pH9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH9
2,148,094	+				-0.0
2,148,095	-				-0.8
2,148,095	-				-1.4
2,148,095	-				-0.5
2,148,095	-				-1.9
2,148,180	-				+0.6
2,148,209	+				+1.5
2,148,210	-				-1.4
2,148,210	-				-2.4
2,148,210	-				-1.0
2,148,210	-				-0.4
2,148,210	-				-0.9
2,148,222	+				-0.0
2,148,222	+				+0.6
2,148,222	+				+0.4
2,148,223	-				-1.3
2,148,223	-				+0.4
2,148,238	-				+0.0
2,148,243	+				-0.5
2,148,243	+				-0.7
2,148,243	+				-0.8
2,148,243	+				-1.3
2,148,243	+				-1.7
2,148,243	+				+1.6
2,148,243	+				-1.0
2,148,243	+				+1.0
2,148,243	+				-0.7
2,148,243	+				-2.4
2,148,244	-				+0.4
2,148,244	-				-2.6
2,148,244	-				+0.1
2,148,244	-				+0.4
2,148,252	+				-0.8
2,148,252	+				-1.2
2,148,252	+				-1.5
2,148,253	-				+0.8
2,148,253	-				-0.9
2,148,306	-				-1.6
2,148,355	+		Pf1N1B4_1878	0.16	+0.9
2,148,355	+		Pf1N1B4_1878	0.16	+0.7
2,148,355	+		Pf1N1B4_1878	0.16	-1.3
2,148,355	+				+1.6
2,148,355	+		Pf1N1B4_1878	0.16	-1.4
2,148,355	+		Pf1N1B4_1878	0.16	-0.1
2,148,355	+		Pf1N1B4_1878	0.16	-0.4
2,148,355	+		Pf1N1B4_1878	0.16	-0.5
2,148,355	+		Pf1N1B4_1878	0.16	-2.2
2,148,355	+		Pf1N1B4_1878	0.16	-1.0
2,148,355	+		Pf1N1B4_1878	0.16	-0.7
2,148,355	+		Pf1N1B4_1878	0.16	-0.8
2,148,355	+		Pf1N1B4_1878	0.16	-0.7
2,148,355	+		Pf1N1B4_1878	0.16	-1.4
2,148,355	+		Pf1N1B4_1878	0.16	-0.5
2,148,355	+		Pf1N1B4_1878	0.16	-1.6
2,148,355	+		Pf1N1B4_1878	0.16	-0.4
2,148,355	+		Pf1N1B4_1878	0.16	-1.8
2,148,355	+		Pf1N1B4_1878	0.16	-0.4
2,148,355	+		Pf1N1B4_1878	0.16	-1.8
2,148,355	+		Pf1N1B4_1878	0.16	-1.0
2,148,355	+		Pf1N1B4_1878	0.16	-1.1
2,148,355	+		Pf1N1B4_1878	0.16	-1.7
2,148,355	+		Pf1N1B4_1878	0.16	-1.3
2,148,355	+		Pf1N1B4_1878	0.16	-1.0
2,148,355	+		Pf1N1B4_1878	0.16	-0.2
2,148,355	+		Pf1N1B4_1878	0.16	-0.8
2,148,355	+		Pf1N1B4_1878	0.16	+0.4
2,148,355	+		Pf1N1B4_1878	0.16	-1.0
2,148,355	+		Pf1N1B4_1878	0.16	-0.7
2,148,355	+		Pf1N1B4_1878	0.16	+0.9
2,148,356	-		Pf1N1B4_1878	0.16	-0.5
2,148,356	-		Pf1N1B4_1878	0.16	-0.9
2,148,356	-		Pf1N1B4_1878	0.16	-1.6
2,148,356	-		Pf1N1B4_1878	0.16	+0.1
2,148,356	-		Pf1N1B4_1878	0.16	+1.0
2,148,356	-		Pf1N1B4_1878	0.16	+0.9
2,148,356	-		Pf1N1B4_1878	0.16	-1.1
2,148,356	-		Pf1N1B4_1878	0.16	-0.2
2,148,356	-		Pf1N1B4_1878	0.16	+1.3
2,148,356	-		Pf1N1B4_1878	0.16	-2.1
2,148,356	-		Pf1N1B4_1878	0.16	-0.5
2,148,356	-		Pf1N1B4_1878	0.16	-0.7
2,148,356	-		Pf1N1B4_1878	0.16	-1.4
2,148,356	-		Pf1N1B4_1878	0.16	-0.4
2,148,356	-		Pf1N1B4_1878	0.16	-1.0
2,148,356	-		Pf1N1B4_1878	0.16	-0.4
2,148,356	-		Pf1N1B4_1878	0.16	+0.4
2,148,356	-		Pf1N1B4_1878	0.16	+1.0
2,148,356	-		Pf1N1B4_1878	0.16	-1.5
2,148,356	-		Pf1N1B4_1878	0.16	-0.0
2,148,356	-		Pf1N1B4_1878	0.16	+1.0
2,148,356	-		Pf1N1B4_1878	0.16	-1.6
2,148,386	+		Pf1N1B4_1878	0.21	+0.2
2,148,386	+		Pf1N1B4_1878	0.21	+0.5
2,148,386	+		Pf1N1B4_1878	0.21	-1.6
2,148,386	+		Pf1N1B4_1878	0.21	-0.0
2,148,386	+		Pf1N1B4_1878	0.21	-0.7
2,148,386	+		Pf1N1B4_1878	0.21	+0.1
2,148,387	-		Pf1N1B4_1878	0.21	-1.3
2,148,387	-		Pf1N1B4_1878	0.21	+0.5
2,148,387	-		Pf1N1B4_1878	0.21	-0.2
2,148,398	+		Pf1N1B4_1878	0.23	-1.2
2,148,399	-		Pf1N1B4_1878	0.23	+0.3
2,148,432	+		Pf1N1B4_1878	0.28	+1.7
2,148,433	-		Pf1N1B4_1878	0.29	+1.7
2,148,433	-		Pf1N1B4_1878	0.29	+0.1
2,148,478	+		Pf1N1B4_1878	0.36	-0.4
2,148,478	+				-0.6
2,148,479	-		Pf1N1B4_1878	0.36	-1.1
2,148,530	+		Pf1N1B4_1878	0.44	-0.5
2,148,530	+		Pf1N1B4_1878	0.44	+0.2
2,148,530	+		Pf1N1B4_1878	0.44	+0.1
2,148,530	+		Pf1N1B4_1878	0.44	-0.3
2,148,530	+		Pf1N1B4_1878	0.44	-2.2
2,148,531	-		Pf1N1B4_1878	0.45	-2.1
2,148,531	-		Pf1N1B4_1878	0.45	-0.8
2,148,531	-		Pf1N1B4_1878	0.45	-1.0
2,148,540	+		Pf1N1B4_1878	0.46	+0.2
2,148,540	+		Pf1N1B4_1878	0.46	-0.8
2,148,540	+		Pf1N1B4_1878	0.46	-0.9
2,148,540	+		Pf1N1B4_1878	0.46	+1.1
2,148,540	+		Pf1N1B4_1878	0.46	-0.3
2,148,541	-		Pf1N1B4_1878	0.46	-0.0
2,148,541	-		Pf1N1B4_1878	0.46	-1.6
2,148,541	-		Pf1N1B4_1878	0.46	-0.1
2,148,541	-		Pf1N1B4_1878	0.46	+0.2
2,148,723	+		Pf1N1B4_1878	0.76	-1.3
2,148,723	+		Pf1N1B4_1878	0.76	-1.5
2,148,723	+		Pf1N1B4_1878	0.76	+0.4
2,148,723	+		Pf1N1B4_1878	0.76	-1.4
2,148,723	+		Pf1N1B4_1878	0.76	-2.2
2,148,723	+		Pf1N1B4_1878	0.76	-1.0
2,148,723	+		Pf1N1B4_1878	0.76	-0.8
2,148,723	+		Pf1N1B4_1878	0.76	+0.3
2,148,724	-		Pf1N1B4_1878	0.76	+1.6
2,148,724	-		Pf1N1B4_1878	0.76	-2.1
2,148,724	-		Pf1N1B4_1878	0.76	-0.9
2,148,724	-		Pf1N1B4_1878	0.76	+0.2
2,148,830	+				-1.3
2,148,831	-				+0.2
2,148,831	-				-0.2
2,148,831	-				-0.8
2,148,849	+				+0.0
2,148,849	+				-2.3
2,148,849	+				-0.4
2,148,849	+				-0.2
2,148,849	+				+0.1
2,148,849	+				+0.1
2,148,849	+				-0.2
2,148,849	+				+0.8
2,148,849	+				+1.4
2,148,849	+				+0.6
2,148,849	+				-0.2
2,148,849	+				+0.2
2,148,849	+				+0.2
2,148,849	+				-1.0
2,148,849	+				-1.0
2,148,849	+				-1.0
2,148,849	+				+0.3
2,148,849	+				-1.3
2,148,849	+				-0.4
2,148,849	+				-1.0
2,148,849	+				-1.5
2,148,849	+				-1.5
2,148,849	+				-1.6
2,148,849	+				+1.0
2,148,849	+				+0.1
2,148,849	+				+1.5
2,148,849	+				-3.2
2,148,849	+				+1.0
2,148,849	+				+0.7
2,148,849	+				+0.4
2,148,849	+				-1.1
2,148,849	+				-0.8
2,148,850	-				-0.4
2,148,850	-				-0.8
2,148,850	-				-2.4
2,148,850	-				+0.4
2,148,850	-				+1.8
2,148,850	-				-2.0
2,148,850	-				+1.7
2,148,850	-				-0.5
2,148,850	-				-1.0
2,148,850	-				-0.3
2,148,850	-				+1.4
2,148,850	-				-1.0
2,148,850	-				+0.9
2,148,850	-				-0.2
2,148,850	-				-0.8
2,148,850	-				-3.2
2,148,850	-				+0.8
2,148,850	-				-2.1
2,148,850	-				+0.1
2,148,850	-				+0.3
2,148,850	-				+1.6
2,148,850	-				+0.3
2,148,850	-				-0.3
2,148,850	-				-1.3
2,148,850	-				-0.2
2,148,850	-				+0.4
2,148,850	-				+0.4
2,148,850	-				+0.2
2,148,850	-				-1.0
2,148,850	-				-1.1
2,148,850	-				+0.3
2,148,850	-				-0.9
2,148,850	-				-1.6
2,148,851	+				+0.6
2,148,851	+				-0.3
2,148,851	+				+1.1
2,148,851	+				-0.2
2,148,851	+				+1.0
2,148,851	+				-0.2
2,148,851	+				-0.2
2,148,851	+				+0.4
2,148,851	+				-0.8
2,148,851	+				-0.8
2,148,851	+				+0.4
2,148,851	+				-0.9
2,148,851	+				-1.0
2,148,851	+				-0.4
2,148,851	+				+1.2
2,148,851	+				-0.2
2,148,851	+				-1.2
2,148,852	-				-0.3
2,148,852	-				+0.7
2,148,852	-				+0.5
2,148,852	-				+2.3
2,148,852	-				-0.5
2,148,852	-				+0.2
2,148,852	-				+1.0
2,148,852	-				-1.6
2,148,852	-				+0.1
2,148,852	-				-0.8
2,148,852	-				-0.6
2,148,852	-				-0.2
2,148,852	-				-1.6
2,148,891	+				-0.4
2,148,891	+				-2.2
2,148,899	+				-0.4
2,148,899	+				+0.7
2,148,899	+				-0.4
2,148,899	+				-2.0
2,148,899	+				-0.0
2,148,899	+				-0.0
2,148,899	+				+1.0
2,148,899	+				-1.6
2,148,899	+				-0.0
2,148,899	+				-0.5
2,148,899	+				+1.1
2,148,899	+				-1.1
2,148,899	+				-2.5
2,148,899	+				+2.0
2,148,899	+				+2.4
2,148,899	+				-1.3
2,148,899	+				-0.0
2,148,899	+				-2.5
2,148,899	+				-0.8
2,148,899	+				+0.6
2,148,899	+				-0.2
2,148,899	+				-1.3
2,148,899	+				-0.0
2,148,899	+				+0.4
2,148,899	+				-1.2
2,148,899	+				+0.4
2,148,899	+				-0.1
2,148,899	+				+1.6
2,148,899	+				-3.2
2,148,899	+				-1.2
2,148,899	+				+0.0
2,148,899	+				-0.8
2,148,899	+				-1.1
2,148,899	+				+1.4
2,148,899	+				+0.7
2,148,899	+				-0.7
2,148,899	+				+0.9
2,148,899	+				-1.2
2,148,899	+				+1.8
2,148,899	+				-3.1
2,148,900	-				-1.4
2,148,900	-				+0.1
2,148,900	-				-2.6
2,148,900	-				+2.2
2,148,900	-				-0.1
2,148,900	-				-1.6
2,148,900	-				-0.7
2,148,900	-				-0.4
2,148,900	-				-1.9
2,148,900	-				-0.8
2,148,900	-				-0.4
2,148,900	-				-2.3
2,148,900	-				+1.7
2,148,900	-				-1.7
2,148,900	-				-1.9
2,148,900	-				-0.3
2,148,916	+				-1.6
2,148,928	-				-2.3
2,148,946	+				+1.0
2,148,946	+				+0.5
2,148,946	+				-0.8
2,148,946	+				+0.8
2,148,946	+				-1.4
2,148,946	+				+0.4
2,148,947	-				+1.2
2,148,947	-				-1.8
2,148,990	+				+0.4
2,148,990	+				+0.3
2,148,995	+				+1.0
2,148,996	-				+0.8
2,148,996	-				+1.1
2,148,996	-				-1.0
2,148,996	-				-1.4
2,149,062	+				+0.9
2,149,062	+				-1.1
2,149,481	-		Pf1N1B4_1879	0.64	-1.4
2,149,707	+				-1.8
2,149,707	+				+0.8
2,149,707	+				+0.8
2,149,708	-				+0.4
2,149,708	-				-1.2
2,149,852	+		Pf1N1B4_1880	0.15	-1.2
2,149,877	+		Pf1N1B4_1880	0.18	-2.1
2,149,877	+		Pf1N1B4_1880	0.18	+0.8
2,149,878	-		Pf1N1B4_1880	0.18	+1.7
2,149,878	-		Pf1N1B4_1880	0.18	-2.0
2,150,012	+		Pf1N1B4_1880	0.33	-1.0
2,150,013	-		Pf1N1B4_1880	0.34	-0.0
2,150,063	+		Pf1N1B4_1880	0.39	-1.1
2,150,115	+		Pf1N1B4_1880	0.45	+1.0
2,150,115	+		Pf1N1B4_1880	0.45	-0.6
2,150,115	+		Pf1N1B4_1880	0.45	+1.3
2,150,116	-		Pf1N1B4_1880	0.46	-0.6
2,150,116	-		Pf1N1B4_1880	0.46	+0.0
2,150,116	-		Pf1N1B4_1880	0.46	+1.2
2,150,276	+		Pf1N1B4_1880	0.64	+0.8
2,150,276	+		Pf1N1B4_1880	0.64	-0.1
2,150,277	-		Pf1N1B4_1880	0.64	-1.1
2,150,277	-		Pf1N1B4_1880	0.64	+0.6
2,150,277	-		Pf1N1B4_1880	0.64	+0.1
2,150,300	+				+0.6
2,150,300	+		Pf1N1B4_1880	0.67	+0.6
2,150,302	+		Pf1N1B4_1880	0.67	-0.7
2,150,302	+		Pf1N1B4_1880	0.67	-0.9
2,150,302	+		Pf1N1B4_1880	0.67	+0.9
2,150,302	+		Pf1N1B4_1880	0.67	-0.2
2,150,303	-		Pf1N1B4_1880	0.67	-0.3
2,150,303	-		Pf1N1B4_1880	0.67	+1.4
2,150,303	-		Pf1N1B4_1880	0.67	-0.6
2,150,332	+		Pf1N1B4_1880	0.71	+0.6
2,150,376	+		Pf1N1B4_1880	0.76	-0.8
2,150,376	+		Pf1N1B4_1880	0.76	+0.6
2,150,376	+		Pf1N1B4_1880	0.76	+0.6
2,150,377	-		Pf1N1B4_1880	0.76	+0.6
2,150,377	-		Pf1N1B4_1880	0.76	-2.3
2,150,377	-		Pf1N1B4_1880	0.76	-1.1
2,150,377	-		Pf1N1B4_1880	0.76	+0.7
2,150,377	-		Pf1N1B4_1880	0.76	-2.1
2,150,443	+		Pf1N1B4_1880	0.84	-1.4
2,150,444	-		Pf1N1B4_1880	0.84	-0.6
2,150,444	-		Pf1N1B4_1880	0.84	-3.6
2,150,618	+				-0.8
2,150,618	+				+1.2
2,150,618	+				-1.1
2,150,619	-				+0.7
2,150,619	-				-1.4
2,150,619	-				+0.1