Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08375

Experiment: NAG carbon and (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG carbon and (N)
1,871,816	-				+0.6
1,871,845	+				-1.6
1,871,845	+				-1.4
1,871,861	+				-0.9
1,871,861	+				+0.1
1,871,861	+				-0.3
1,871,861	+				-1.1
1,871,861	+				-2.9
1,871,862	-				-2.1
1,871,862	-				-1.5
1,871,862	-				-1.6
1,871,862	-				-0.4
1,871,879	-				-1.1
1,871,895	+				+0.7
1,871,896	-				-1.7
1,871,896	-				-1.8
1,871,896	-				-0.6
1,871,896	-				-1.8
1,871,896	-				-0.7
1,871,898	+				-2.1
1,871,898	+				-2.5
1,871,898	+				-0.9
1,871,898	+				-2.1
1,871,898	+				-0.7
1,871,898	+				-3.6
1,871,898	+				+0.5
1,871,898	+				-1.3
1,871,899	-				-1.4
1,871,899	-				-2.4
1,871,899	-				-2.2
1,871,899	-				-2.3
1,871,899	-				-0.0
1,871,899	-				-3.2
1,871,923	+		PFLU_RS08370	0.10	-1.6
1,871,923	+		PFLU_RS08370	0.10	-1.6
1,871,924	-		PFLU_RS08370	0.11	-0.4
1,871,924	-		PFLU_RS08370	0.11	-0.4
1,871,924	-		PFLU_RS08370	0.11	+0.1
1,871,924	-		PFLU_RS08370	0.11	-3.2
1,871,924	-		PFLU_RS08370	0.11	-0.3
1,871,998	+		PFLU_RS08370	0.40	-1.9
1,872,003	+		PFLU_RS08370	0.42	-2.3
1,872,172	+				-2.1
1,872,173	-				-3.1
1,872,173	-				-2.3
1,872,175	+				-1.0
1,872,175	+				+0.1
1,872,175	+				-2.4
1,872,175	+				-0.6
1,872,175	+				-0.3
1,872,175	+				-3.5
1,872,175	+				-2.0
1,872,175	+				-1.1
1,872,175	+				+1.4
1,872,175	+				-2.6
1,872,175	+				-2.3
1,872,175	+				-1.4
1,872,175	+				-1.1
1,872,176	-				-2.0
1,872,176	-				-2.5
1,872,176	-				-1.1
1,872,176	-				-1.7
1,872,176	-				-0.3
1,872,183	+				-0.7
1,872,183	+				-0.3
1,872,183	+				-1.1
1,872,183	+				-0.7
1,872,184	-				-0.3
1,872,184	-				-0.5
1,872,184	-				-3.7
1,872,184	-				-2.9
1,872,201	+				-2.2
1,872,201	+				-2.6
1,872,201	+				-2.2
1,872,202	-				-1.3
1,872,202	-				-0.8
1,872,202	-				-2.0
1,872,213	+				-2.0
1,872,213	+				-2.6
1,872,213	+				-1.4
1,872,213	+				-2.7
1,872,213	+				-3.3
1,872,213	+				-0.3
1,872,213	+				-1.3
1,872,213	+				-0.9
1,872,213	+				+3.0
1,872,214	-				-2.4
1,872,214	-				-2.4
1,872,214	-				-1.7
1,872,217	+				-2.9
1,872,217	+				-2.6
1,872,217	+				-1.2
1,872,217	+				+0.9
1,872,217	+				-0.1
1,872,217	+				-2.4
1,872,217	+				-2.4
1,872,217	+				-0.6
1,872,217	+				-1.6
1,872,217	+				-0.7
1,872,217	+				-3.2
1,872,217	+				-2.4
1,872,217	+				-2.6
1,872,218	-				-2.4
1,872,218	-				-1.7
1,872,218	-				+0.1
1,872,218	-				-3.1
1,872,218	-				-1.1
1,872,218	-				-3.2
1,872,218	-				-2.1
1,872,218	-				-0.6
1,872,218	-				-2.6
1,872,218	-				-2.0
1,872,218	-				-2.2
1,872,218	-				-1.1
1,872,218	-				-3.1
1,872,218	-				-1.3
1,872,218	-				-2.6
1,872,218	-				-1.1
1,872,218	-				-1.7
1,872,218	-				-2.2
1,872,218	-				-3.1
1,872,218	-				-2.4
1,872,220	+				-1.8
1,872,221	-				-2.6
1,872,221	-				+0.3
1,872,227	+				-1.4
1,872,227	+				-1.1
1,872,227	+				-1.9
1,872,228	-				+0.5
1,872,228	-				+0.8
1,872,228	-				+0.4
1,872,233	+				-3.5
1,872,233	+				-0.9
1,872,233	+				-2.1
1,872,233	+				-2.9
1,872,233	+				+0.3
1,872,233	+				-1.1
1,872,233	+				-0.2
1,872,233	+				-2.6
1,872,234	-				-1.4
1,872,234	-				-2.8
1,872,234	-				-2.9
1,872,234	-				-3.1
1,872,234	-				-1.3
1,872,234	-				-1.7
1,872,236	+				+1.7
1,872,237	-				-2.7
1,872,237	-				-3.5
1,872,237	-				-1.6
1,872,240	+				+0.1
1,872,240	+				-2.3
1,872,241	-				-1.9
1,872,241	-				-0.8
1,872,241	-				-2.0
1,872,250	+				-1.7
1,872,251	-				+0.3
1,872,286	+				-1.7
1,872,286	+				+0.1
1,872,287	-				+1.8
1,872,287	-				+0.4
1,872,313	+				-2.2
1,872,385	+				-2.4
1,872,385	+				-0.6
1,872,385	+				-1.1
1,872,385	+				-0.3
1,872,386	-				+0.6
1,872,386	-				+0.1
1,872,386	-				+0.6
1,872,386	-				+0.5
1,872,386	-				-0.3
1,872,394	+				-1.4
1,872,394	+				-0.9
1,872,415	-				+1.3
1,872,474	+				-1.4
1,872,474	+				-2.5
1,872,474	+				-0.6
1,872,474	+				+0.1
1,872,474	+				+0.6
1,872,474	+				+0.4
1,872,474	+				-0.9
1,872,474	+				-0.4
1,872,474	+				+0.9
1,872,474	+				-3.8
1,872,474	+				-2.9
1,872,475	-				+1.7
1,872,475	-				+1.2
1,872,475	-				+0.1
1,872,475	-				+0.4
1,872,475	-				-0.8
1,872,475	-				+0.6
1,872,475	-				+1.5
1,872,475	-				-0.7
1,872,475	-				+1.3
1,872,475	-				-1.0
1,872,475	-				-0.5
1,872,487	-				-1.9
1,872,487	-				-0.2
1,872,565	+				-3.6
1,872,565	+				+0.9
1,872,565	+				-2.8
1,872,565	+				-2.4
1,872,565	+				-2.7
1,872,565	+				-2.3
1,872,565	+				-0.9
1,872,565	+				-2.9
1,872,565	+				+0.2
1,872,565	+				-1.4
1,872,565	+				-1.0
1,872,565	+				+1.5
1,872,565	+				-1.4
1,872,565	+				-0.9
1,872,566	-				+0.3
1,872,566	-				-0.2
1,872,566	-				-0.6
1,872,566	-				-1.1
1,872,566	-				+1.7
1,872,566	-				+0.5
1,872,566	-				+1.1
1,872,566	-				+2.2
1,872,566	-				+0.9
1,872,566	-				+0.7
1,872,566	-				-1.1
1,872,624	+				+0.0
1,872,624	+				-2.3
1,872,624	+				+1.5
1,872,624	+				-1.7
1,872,624	+				+1.3
1,872,624	+				+0.5
1,872,624	+				-2.9
1,872,624	+				+0.9
1,872,625	-				-0.9
1,872,625	-				-1.4
1,872,625	-				-1.7
1,872,625	-				-2.4
1,872,627	+				-2.0
1,872,627	+				-2.8
1,872,627	+				+2.2
1,872,627	+				+0.3
1,872,627	+				-0.6
1,872,627	+				-0.5
1,872,627	+				+0.1
1,872,628	-				+0.1
1,872,628	-				-3.1
1,872,628	-				-3.3
1,872,628	-				+0.5
1,872,628	-				+0.5
1,872,628	-				-1.0
1,872,628	-				-1.4
1,872,628	-				-0.5
1,872,628	-				-1.1
1,872,628	-				-0.7
1,872,628	-				-2.6
1,872,628	-				-1.0
1,872,628	-				+0.2
1,872,634	+				+0.7
1,872,635	-				-1.1
1,872,635	-				+0.3
1,872,635	-				-1.1
1,872,635	-				-0.6
1,872,647	+				+1.0
1,872,647	+				-1.4
1,872,647	+				-2.2
1,872,647	+				-0.4
1,872,648	-				-0.7
1,872,648	-				+0.3
1,872,648	-				-0.9
1,872,648	-				-0.3
1,872,648	-				-1.6
1,872,648	-				+0.2
1,872,648	-				+0.2
1,872,648	-				-0.9
1,872,693	+				-0.0
1,872,693	+				+1.0
1,872,693	+				+1.8
1,872,693	+				+1.0
1,872,693	+				-2.8
1,872,693	+				-1.4
1,872,693	+				-0.4
1,872,693	+				-1.2
1,872,693	+				-1.3
1,872,693	+				-2.0
1,872,693	+				+0.6
1,872,693	+				-1.9
1,872,693	+				+1.4
1,872,693	+				-1.9
1,872,693	+				+0.1
1,872,694	-				-2.3
1,872,694	-				+0.9
1,872,694	-				-0.5
1,872,694	-				-0.4
1,872,694	-				+0.3
1,872,694	-				-1.9
1,872,694	-				-2.4
1,872,694	-				+1.2
1,872,694	-				-0.4
1,872,694	-				+0.4
1,872,694	-				-2.7
1,872,694	-				-1.4
1,872,694	-				+1.6
1,872,694	-				-1.9
1,872,694	-				+1.3
1,872,722	+				-1.1
1,872,723	-				-1.0
1,872,723	-				+0.7
1,872,728	-				-0.8
1,872,757	+				-2.0
1,872,757	+				-1.5
1,872,757	+				-1.7
1,872,757	+				-1.2
1,872,757	+				-0.0
1,872,757	+				-3.3
1,872,757	+				-2.0
1,872,757	+				-3.0
1,872,758	-				-0.3
1,872,758	-				-2.6
1,872,758	-				-1.1
1,872,758	-				-1.3
1,872,758	-				-1.3
1,872,837	+		PFLU_RS08375	0.27	-1.5
1,872,837	+		PFLU_RS08375	0.27	-3.2
1,872,837	+		PFLU_RS08375	0.27	-1.7
1,872,837	+		PFLU_RS08375	0.27	-1.9
1,872,837	+		PFLU_RS08375	0.27	-1.7
1,872,838	-		PFLU_RS08375	0.27	-2.3
1,872,838	-		PFLU_RS08375	0.27	-2.2
1,872,838	-		PFLU_RS08375	0.27	-0.8
1,872,838	-		PFLU_RS08375	0.27	-1.0
1,872,838	-		PFLU_RS08375	0.27	+1.2
1,872,846	+		PFLU_RS08375	0.30	-0.6
1,872,846	+		PFLU_RS08375	0.30	-0.9
1,872,846	+		PFLU_RS08375	0.30	-2.7
1,872,846	+		PFLU_RS08375	0.30	-2.5
1,872,846	+		PFLU_RS08375	0.30	-2.0
1,872,846	+		PFLU_RS08375	0.30	-0.5
1,872,846	+		PFLU_RS08375	0.30	+0.1
1,872,846	+		PFLU_RS08375	0.30	-0.3
1,872,846	+		PFLU_RS08375	0.30	-0.4
1,872,846	+		PFLU_RS08375	0.30	-0.5
1,872,846	+		PFLU_RS08375	0.30	-2.5
1,872,846	+		PFLU_RS08375	0.30	-3.9
1,872,846	+		PFLU_RS08375	0.30	+0.2
1,872,846	+		PFLU_RS08375	0.30	-2.0
1,872,846	+		PFLU_RS08375	0.30	+1.6
1,872,846	+		PFLU_RS08375	0.30	-3.6
1,872,846	+		PFLU_RS08375	0.30	-1.7
1,872,846	+		PFLU_RS08375	0.30	-1.6
1,872,846	+		PFLU_RS08375	0.30	-2.7
1,872,846	+		PFLU_RS08375	0.30	-2.5
1,872,846	+		PFLU_RS08375	0.30	-2.2
1,872,846	+		PFLU_RS08375	0.30	+0.2
1,872,846	+		PFLU_RS08375	0.30	-2.2
1,872,846	+		PFLU_RS08375	0.30	-2.4
1,872,846	+		PFLU_RS08375	0.30	-1.6
1,872,846	+		PFLU_RS08375	0.30	-1.4
1,872,846	+		PFLU_RS08375	0.30	-1.9
1,872,846	+		PFLU_RS08375	0.30	+1.2
1,872,846	+		PFLU_RS08375	0.30	-3.3
1,872,846	+		PFLU_RS08375	0.30	-1.3
1,872,846	+		PFLU_RS08375	0.30	-0.3
1,872,846	+		PFLU_RS08375	0.30	+0.7
1,872,846	+		PFLU_RS08375	0.30	-0.4
1,872,846	+		PFLU_RS08375	0.30	+0.1
1,872,846	+		PFLU_RS08375	0.30	-0.7
1,872,847	-		PFLU_RS08375	0.30	+0.5
1,872,847	-		PFLU_RS08375	0.30	-1.2
1,872,847	-		PFLU_RS08375	0.30	-1.3
1,872,847	-		PFLU_RS08375	0.30	+0.1
1,872,847	-		PFLU_RS08375	0.30	+0.2
1,872,847	-		PFLU_RS08375	0.30	-0.6
1,872,847	-		PFLU_RS08375	0.30	-1.9
1,872,847	-		PFLU_RS08375	0.30	-2.4
1,872,847	-		PFLU_RS08375	0.30	+1.1
1,872,847	-		PFLU_RS08375	0.30	+1.3
1,872,847	-		PFLU_RS08375	0.30	-0.6
1,872,847	-		PFLU_RS08375	0.30	-1.6
1,872,847	-		PFLU_RS08375	0.30	+0.1
1,872,847	-		PFLU_RS08375	0.30	-1.1
1,872,847	-		PFLU_RS08375	0.30	+0.3
1,872,847	-		PFLU_RS08375	0.30	-2.2
1,872,847	-		PFLU_RS08375	0.30	-0.3
1,872,848	+		PFLU_RS08375	0.30	-0.8
1,872,848	+		PFLU_RS08375	0.30	-1.7
1,872,848	+		PFLU_RS08375	0.30	-2.0
1,872,848	+		PFLU_RS08375	0.30	+1.2
1,872,848	+		PFLU_RS08375	0.30	-1.4
1,872,848	+		PFLU_RS08375	0.30	-0.6
1,872,849	-		PFLU_RS08375	0.31	-1.5
1,872,849	-		PFLU_RS08375	0.31	-0.7
1,872,849	-		PFLU_RS08375	0.31	-1.3
1,872,849	-		PFLU_RS08375	0.31	-0.3
1,872,875	+		PFLU_RS08375	0.40	-2.2
1,872,875	+		PFLU_RS08375	0.40	-0.6
1,872,876	-		PFLU_RS08375	0.40	-1.4
1,872,876	-		PFLU_RS08375	0.40	-1.2
1,872,876	-		PFLU_RS08375	0.40	+0.4
1,872,876	-		PFLU_RS08375	0.40	+2.9
1,872,879	+		PFLU_RS08375	0.41	-0.5
1,872,879	+		PFLU_RS08375	0.41	-1.7
1,872,879	+		PFLU_RS08375	0.41	-0.2
1,872,880	-		PFLU_RS08375	0.42	-0.6
1,872,880	-		PFLU_RS08375	0.42	-0.5
1,872,880	-		PFLU_RS08375	0.42	-3.0
1,872,880	-		PFLU_RS08375	0.42	-2.3
1,872,880	-		PFLU_RS08375	0.42	+0.4
1,872,880	-		PFLU_RS08375	0.42	-2.4
1,872,917	+		PFLU_RS08375	0.55	-1.4
1,872,917	+		PFLU_RS08375	0.55	-2.0
1,872,917	+		PFLU_RS08375	0.55	-2.3
1,872,918	-		PFLU_RS08375	0.55	-1.7
1,872,969	+		PFLU_RS08375	0.73	+1.1
1,872,969	+		PFLU_RS08375	0.73	-1.9
1,872,970	-		PFLU_RS08375	0.74	-0.4
1,872,970	-		PFLU_RS08375	0.74	+0.0
1,872,971	+		PFLU_RS08375	0.74	-0.1
1,872,971	+		PFLU_RS08375	0.74	+1.0
1,872,972	-		PFLU_RS08375	0.74	-0.9
1,872,993	+		PFLU_RS08375	0.82	-3.2
1,872,993	+		PFLU_RS08375	0.82	-0.3
1,872,993	+		PFLU_RS08375	0.82	-2.2
1,872,993	+		PFLU_RS08375	0.82	-0.2
1,872,993	+		PFLU_RS08375	0.82	-0.7
1,872,993	+		PFLU_RS08375	0.82	-1.3
1,872,993	+		PFLU_RS08375	0.82	-1.3
1,872,994	-		PFLU_RS08375	0.82	-1.4
1,872,994	-		PFLU_RS08375	0.82	-1.1
1,872,994	-		PFLU_RS08375	0.82	+2.2
1,872,994	-		PFLU_RS08375	0.82	+1.2
1,872,994	-		PFLU_RS08375	0.82	-1.1
1,873,005	+		PFLU_RS08375	0.86	+0.0
1,873,005	+		PFLU_RS08375	0.86	-2.4
1,873,005	+		PFLU_RS08375	0.86	-1.6
1,873,005	+		PFLU_RS08375	0.86	-2.7
1,873,005	+		PFLU_RS08375	0.86	-1.1
1,873,006	-		PFLU_RS08375	0.87	-2.3
1,873,006	-		PFLU_RS08375	0.87	-0.9
1,873,006	-		PFLU_RS08375	0.87	-1.4
1,873,006	-		PFLU_RS08375	0.87	+1.2
1,873,006	-		PFLU_RS08375	0.87	+0.8
1,873,006	-		PFLU_RS08375	0.87	-0.4
1,873,006	-		PFLU_RS08375	0.87	-3.5
1,873,006	-		PFLU_RS08375	0.87	-2.2
1,873,006	-		PFLU_RS08375	0.87	-0.5
1,873,006	-		PFLU_RS08375	0.87	+0.1
1,873,041	+				-0.6
1,873,041	+				-0.4
1,873,042	-				+2.0
1,873,042	-				+0.0
1,873,042	-				+0.0
1,873,042	-				+0.5
1,873,048	+				+1.1
1,873,048	+				-1.9
1,873,048	+				+2.5
1,873,048	+				-3.9
1,873,049	-				-0.3
1,873,049	-				-3.0
1,873,049	-				+1.0
1,873,049	-				+1.0
1,873,049	-				+1.0
1,873,104	+				-0.3
1,873,104	+				-1.3
1,873,105	-				-1.0
1,873,105	-				+0.7
1,873,105	-				-1.0
1,873,105	-				-0.6
1,873,105	-				-1.1
1,873,217	+		PFLU_RS08380	0.10	-1.4
1,873,218	-		PFLU_RS08380	0.10	+0.4
1,873,411	-		PFLU_RS08380	0.28	-1.1
1,873,411	-		PFLU_RS08380	0.28	-0.7
1,873,411	-		PFLU_RS08380	0.28	-2.2
1,873,457	+		PFLU_RS08380	0.32	-0.9
1,873,457	+		PFLU_RS08380	0.32	-1.3
1,873,457	+		PFLU_RS08380	0.32	-1.4
1,873,457	+		PFLU_RS08380	0.32	-2.9
1,873,457	+		PFLU_RS08380	0.32	-2.9
1,873,457	+		PFLU_RS08380	0.32	-0.3
1,873,457	+		PFLU_RS08380	0.32	-2.3
1,873,457	+		PFLU_RS08380	0.32	+0.7
1,873,457	+		PFLU_RS08380	0.32	-2.0
1,873,457	+		PFLU_RS08380	0.32	-2.1
1,873,457	+		PFLU_RS08380	0.32	-1.3
1,873,457	+		PFLU_RS08380	0.32	-1.4
1,873,457	+		PFLU_RS08380	0.32	-2.7
1,873,458	-		PFLU_RS08380	0.32	-1.1
1,873,458	-		PFLU_RS08380	0.32	+1.7
1,873,458	-		PFLU_RS08380	0.32	+1.7
1,873,458	-		PFLU_RS08380	0.32	-0.3
1,873,458	-		PFLU_RS08380	0.32	+1.3
1,873,458	-		PFLU_RS08380	0.32	-0.3
1,873,458	-		PFLU_RS08380	0.32	-1.3
1,873,499	+		PFLU_RS08380	0.36	-0.4
1,873,500	-		PFLU_RS08380	0.36	-0.1
1,873,727	+		PFLU_RS08380	0.57	-0.6
1,873,727	+		PFLU_RS08380	0.57	-0.6
1,873,728	-		PFLU_RS08380	0.58	-0.3
1,873,728	-		PFLU_RS08380	0.58	-1.3
1,873,728	-		PFLU_RS08380	0.58	-1.1
1,873,901	+		PFLU_RS08380	0.74	+0.7
1,873,901	+		PFLU_RS08380	0.74	-0.6
1,873,901	+		PFLU_RS08380	0.74	+1.1
1,873,901	+		PFLU_RS08380	0.74	-2.0
1,873,901	+		PFLU_RS08380	0.74	-2.0
1,873,901	+		PFLU_RS08380	0.74	-1.6
1,873,902	-		PFLU_RS08380	0.74	-2.0
1,873,902	-		PFLU_RS08380	0.74	+0.1
1,873,902	-		PFLU_RS08380	0.74	-1.7
1,873,902	-		PFLU_RS08380	0.74	-1.6
1,873,902	-		PFLU_RS08380	0.74	-0.7
1,873,902	-		PFLU_RS08380	0.74	+1.9
1,873,902	-		PFLU_RS08380	0.74	-0.6
1,873,919	+		PFLU_RS08380	0.75	-2.7
1,873,919	+		PFLU_RS08380	0.75	-1.6
1,873,919	+		PFLU_RS08380	0.75	-1.1
1,873,919	+		PFLU_RS08380	0.75	-1.9
1,873,919	+		PFLU_RS08380	0.75	-0.7
1,873,920	-		PFLU_RS08380	0.75	+0.6
1,873,920	-		PFLU_RS08380	0.75	-1.3
1,873,920	-		PFLU_RS08380	0.75	+0.7
1,873,920	-		PFLU_RS08380	0.75	-0.4
1,873,920	-		PFLU_RS08380	0.75	-0.9
1,873,967	+		PFLU_RS08380	0.80	-0.3
1,873,967	+		PFLU_RS08380	0.80	-1.4
1,873,967	+		PFLU_RS08380	0.80	-1.3
1,873,967	+		PFLU_RS08380	0.80	-0.4
1,873,967	+		PFLU_RS08380	0.80	-1.4
1,873,968	-		PFLU_RS08380	0.80	-1.3