Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08095

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,522,458	+		MMP_RS08085	0.38	-0.0
1,522,479	-		MMP_RS08085	0.40	+0.0
1,522,480	+		MMP_RS08085	0.40	+0.5
1,522,570	+		MMP_RS08085	0.50	-0.6
1,522,595	+		MMP_RS08085	0.53	-0.2
1,522,658	-		MMP_RS08085	0.59	+0.7
1,522,664	+		MMP_RS08085	0.60	+0.0
1,522,672	+		MMP_RS08085	0.61	-0.0
1,522,672	+		MMP_RS08085	0.61	-0.1
1,522,704	+		MMP_RS08085	0.64	-0.2
1,522,704	+		MMP_RS08085	0.64	-0.1
1,522,707	+		MMP_RS08085	0.65	+0.3
1,522,727	+		MMP_RS08085	0.67	-0.5
1,522,847	+		MMP_RS08085	0.80	+0.0
1,522,859	+		MMP_RS08085	0.81	+0.2
1,522,951	+				+0.4
1,522,952	-				+0.1
1,522,991	-				-0.1
1,523,023	-				-0.3
1,523,024	+				-0.0
1,523,029	+				+0.4
1,523,029	+				+1.0
1,523,029	+				+0.4
1,523,029	+				+0.3
1,523,040	-				+0.2
1,523,064	-				+0.1
1,523,088	+				+0.2
1,523,091	-				-0.4
1,523,092	+				+0.3
1,523,092	+				+1.0
1,523,092	+				+0.1
1,523,093	-				+0.2
1,523,093	-				+0.5
1,523,094	+				-0.1
1,523,095	-				-0.1
1,523,095	-				+0.0
1,523,104	+				+0.0
1,523,104	+				-0.1
1,523,156	-		MMP_RS08090	0.10	-0.5
1,523,367	-		MMP_RS08090	0.81	+0.6
1,523,371	+		MMP_RS08090	0.82	-0.5
1,523,371	+		MMP_RS08090	0.82	+0.0
1,523,392	+		MMP_RS08090	0.90	-0.0
1,523,451	-				-0.3
1,523,575	+		MMP_RS08095	0.25	-0.9
1,523,707	-		MMP_RS08095	0.48	-0.6
1,523,758	-		MMP_RS08095	0.57	-0.6
1,523,762	-		MMP_RS08095	0.57	-0.9
1,523,763	+		MMP_RS08095	0.57	+1.8
1,523,801	+		MMP_RS08095	0.64	+0.3
1,523,815	-		MMP_RS08095	0.66	-0.1
1,523,920	+		MMP_RS08095	0.85	-0.4
1,523,924	-		MMP_RS08095	0.86	-0.7
1,523,925	+		MMP_RS08095	0.86	+0.5
1,523,925	+		MMP_RS08095	0.86	-1.5
1,523,925	+		MMP_RS08095	0.86	-0.3
1,523,931	-		MMP_RS08095	0.87	-0.0
1,523,962	-				-1.0
1,523,965	+				-0.5
1,523,965	+				-0.8
1,523,965	+				-0.9
1,524,040	+				-0.5
1,524,058	-				-0.7
1,524,254	-		MMP_RS08100	0.17	-0.6
1,524,424	-		MMP_RS08100	0.32	-0.6
1,524,428	-		MMP_RS08100	0.32	-0.8
1,524,443	-		MMP_RS08100	0.34	+0.6
1,524,550	+		MMP_RS08100	0.43	-0.0
1,524,631	-		MMP_RS08100	0.50	-0.0
1,524,732	+		MMP_RS08100	0.60	-0.5
1,524,748	+		MMP_RS08100	0.61	-0.6
1,524,915	-		MMP_RS08100	0.76	-0.6