Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06355

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,221,384	-		MMP_RS06345	0.73	-4.3
1,221,384	-		MMP_RS06345	0.73	-2.4
1,221,543	-				-2.5
1,221,599	+				-0.3
1,221,610	-				+0.5
1,221,610	-				-0.7
1,221,611	+				-0.1
1,221,628	+				-0.0
1,221,630	+				+0.2
1,221,641	-				-0.1
1,221,641	-				-0.3
1,221,642	+				-0.1
1,221,642	+				+0.2
1,221,654	+				-0.2
1,221,654	+				-2.3
1,221,654	+				-2.6
1,221,781	+		MMP_RS06350	0.18	-2.3
1,221,860	+		MMP_RS06350	0.29	-2.8
1,221,927	+		MMP_RS06350	0.38	-2.3
1,222,030	+		MMP_RS06350	0.52	-2.2
1,222,041	+		MMP_RS06350	0.54	-2.3
1,222,053	+		MMP_RS06350	0.55	-2.4
1,222,156	-		MMP_RS06350	0.70	-3.1
1,222,652	-		MMP_RS06355	0.67	-2.8
1,222,653	+		MMP_RS06355	0.67	-2.1
1,222,653	+		MMP_RS06355	0.67	-2.4
1,222,800	+				-0.3
1,222,827	+				-1.1
1,222,926	+				-1.3
1,222,982	-				-0.4
1,223,426	-				-0.6
1,223,427	+				-1.7
1,223,577	+				-0.1
1,223,577	+				-0.1
1,223,577	+				+0.2
1,223,582	-				+0.8
1,223,583	+				+0.0
1,223,583	+				+0.4
1,223,584	-				+0.5
1,223,584	-				+0.2
1,223,585	+				+0.0
1,223,585	+				-0.2
1,223,587	-				+0.7
1,223,588	+				+0.2
1,223,588	+				-0.2
1,223,588	+				+1.5
1,223,588	+				-0.2
1,223,589	-				-0.1
1,223,589	-				+0.1
1,223,589	-				+0.0
1,223,589	-				+0.6
1,223,589	-				+0.7
1,223,590	+				+0.2
1,223,590	+				-0.0
1,223,590	+				+0.0
1,223,598	-				+0.3
1,223,599	+				+0.0
1,223,622	+				-0.2
1,223,627	-		MMP_RS06365	0.11	-0.1
1,223,667	+		MMP_RS06365	0.31	+0.2