Strain Fitness in Methanococcus maripaludis S2 around MMP_RS00295

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
65,009	-		MMP_RS00285	0.56	-0.3
65,009	-		MMP_RS00285	0.56	-0.3
65,293	+		MMP_RS00285	0.81	-0.0
65,371	+		MMP_RS00285	0.88	-0.2
65,373	-		MMP_RS00285	0.89	-0.4
65,437	+				+0.4
65,464	-				-0.4
65,464	-				-0.1
65,465	+				-0.3
65,498	-				+0.6
65,499	+				+0.1
65,508	-				-1.0
65,521	-				-1.2
65,522	+				+0.1
65,522	+				-0.4
65,522	+				-0.4
65,523	-				-0.8
65,575	-				-1.2
65,575	-				-1.4
65,575	-				-0.5
65,575	-				-1.7
65,575	-				-0.4
65,577	-				-1.2
65,577	-				-1.2
65,578	+				-0.9
65,578	+				-0.8
65,578	+				-0.2
65,587	-		MMP_RS00290	0.11	-0.9
65,587	-		MMP_RS00290	0.11	-1.3
65,619	-		MMP_RS00290	0.23	-0.5
65,625	-		MMP_RS00290	0.25	-1.2
65,664	-		MMP_RS00290	0.40	-1.5
65,755	-		MMP_RS00290	0.73	-1.3
65,773	-		MMP_RS00290	0.79	-0.4
65,854	-				-2.0
65,855	+				-1.4
65,864	+				-2.6
65,865	-				-2.4
65,866	+				-1.8
65,946	-		MMP_RS00295	0.17	-1.6
66,252	-		MMP_RS00295	0.84	-1.8
66,320	-				-2.4
66,320	-				-1.5
66,713	+		MMP_RS00300	0.83	-3.4
66,841	-				-1.6
66,841	-				-1.6
66,843	-				-2.7
66,888	-		MMP_RS00305	0.23	-2.4
66,889	+		MMP_RS00305	0.23	-1.5
66,897	+		MMP_RS00305	0.26	-0.6
66,972	+		MMP_RS00305	0.52	-2.9
66,975	+		MMP_RS00305	0.53	+0.2
67,115	-				+0.4
67,115	-				+0.5
67,152	-				+0.1
67,162	-				-0.2
67,163	+				-0.2
67,174	+				+0.6
67,269	+		MMP_RS00310	0.17	-0.9
67,295	-		MMP_RS00310	0.20	+0.3
67,297	-		MMP_RS00310	0.20	-0.0