Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13850 and BWI76_RS13855 are separated by 79 nucleotides BWI76_RS13855 and BWI76_RS13860 are separated by 115 nucleotides BWI76_RS13860 and BWI76_RS13865 are separated by 197 nucleotides
BWI76_RS13850: BWI76_RS13850 - N-acetyltransferase, at 2,889,237 to 2,889,716
_RS13850
BWI76_RS13855: BWI76_RS13855 - peroxiredoxin, at 2,889,796 to 2,890,227
_RS13855
BWI76_RS13860: BWI76_RS13860 - hypothetical protein, at 2,890,343 to 2,891,212
_RS13860
BWI76_RS13865: BWI76_RS13865 - cation diffusion facilitator family transporter, at 2,891,410 to 2,892,318
_RS13865
Position (kb)
2890
2891
2892 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2889.458 kb on + strand, within BWI76_RS13850 at 2889.509 kb on - strand, within BWI76_RS13850 at 2889.546 kb on + strand, within BWI76_RS13850 at 2889.654 kb on - strand, within BWI76_RS13850 at 2889.718 kb on - strand at 2889.763 kb on - strand at 2889.919 kb on + strand, within BWI76_RS13855 at 2889.989 kb on + strand, within BWI76_RS13855 at 2890.008 kb on + strand, within BWI76_RS13855 at 2890.215 kb on + strand at 2890.256 kb on + strand at 2890.423 kb on + strand at 2890.608 kb on - strand, within BWI76_RS13860 at 2890.779 kb on + strand, within BWI76_RS13860 at 2890.787 kb on - strand, within BWI76_RS13860 at 2891.019 kb on - strand, within BWI76_RS13860 at 2891.077 kb on - strand, within BWI76_RS13860 at 2891.097 kb on + strand, within BWI76_RS13860 at 2891.097 kb on + strand, within BWI76_RS13860 at 2891.097 kb on + strand, within BWI76_RS13860 at 2891.105 kb on - strand, within BWI76_RS13860 at 2891.105 kb on - strand, within BWI76_RS13860 at 2891.107 kb on + strand, within BWI76_RS13860 at 2891.131 kb on + strand at 2891.137 kb on - strand at 2891.139 kb on - strand at 2891.142 kb on + strand at 2891.154 kb on + strand at 2891.154 kb on + strand at 2891.160 kb on - strand at 2891.160 kb on - strand at 2891.162 kb on - strand at 2891.164 kb on + strand at 2891.164 kb on + strand at 2891.167 kb on + strand at 2891.167 kb on + strand at 2891.174 kb on + strand at 2891.174 kb on + strand at 2891.174 kb on + strand at 2891.174 kb on + strand at 2891.174 kb on + strand at 2891.175 kb on - strand at 2891.179 kb on + strand at 2891.180 kb on - strand at 2891.182 kb on - strand at 2891.184 kb on + strand at 2891.186 kb on + strand at 2891.187 kb on - strand at 2891.195 kb on - strand at 2891.195 kb on - strand at 2891.240 kb on - strand at 2891.381 kb on - strand at 2891.430 kb on + strand at 2891.438 kb on + strand at 2891.446 kb on - strand at 2891.456 kb on + strand at 2891.461 kb on + strand at 2891.466 kb on + strand at 2891.500 kb on + strand at 2891.506 kb on - strand at 2891.511 kb on + strand, within BWI76_RS13865 at 2891.627 kb on - strand, within BWI76_RS13865 at 2891.628 kb on - strand, within BWI76_RS13865 at 2891.637 kb on + strand, within BWI76_RS13865 at 2891.645 kb on - strand, within BWI76_RS13865 at 2891.653 kb on - strand, within BWI76_RS13865 at 2891.701 kb on - strand, within BWI76_RS13865 at 2891.723 kb on - strand, within BWI76_RS13865 at 2891.783 kb on + strand, within BWI76_RS13865 at 2891.858 kb on + strand, within BWI76_RS13865 at 2892.000 kb on - strand, within BWI76_RS13865 at 2892.004 kb on - strand, within BWI76_RS13865 at 2892.015 kb on - strand, within BWI76_RS13865 at 2892.015 kb on - strand, within BWI76_RS13865 at 2892.058 kb on - strand, within BWI76_RS13865 at 2892.115 kb on - strand, within BWI76_RS13865 at 2892.115 kb on - strand, within BWI76_RS13865 at 2892.171 kb on + strand, within BWI76_RS13865
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,889,458 + BWI76_RS13850 0.46 +0.3 2,889,509 - BWI76_RS13850 0.57 +0.0 2,889,546 + BWI76_RS13850 0.64 -0.5 2,889,654 - BWI76_RS13850 0.87 -0.1 2,889,718 - -0.3 2,889,763 - +0.4 2,889,919 + BWI76_RS13855 0.28 +0.5 2,889,989 + BWI76_RS13855 0.45 -0.4 2,890,008 + BWI76_RS13855 0.49 -0.1 2,890,215 + +0.4 2,890,256 + -1.2 2,890,423 + -0.0 2,890,608 - BWI76_RS13860 0.30 -1.4 2,890,779 + BWI76_RS13860 0.50 -0.3 2,890,787 - BWI76_RS13860 0.51 -0.3 2,891,019 - BWI76_RS13860 0.78 -0.4 2,891,077 - BWI76_RS13860 0.84 -0.5 2,891,097 + BWI76_RS13860 0.87 +0.2 2,891,097 + BWI76_RS13860 0.87 -1.4 2,891,097 + BWI76_RS13860 0.87 -1.0 2,891,105 - BWI76_RS13860 0.88 -1.2 2,891,105 - BWI76_RS13860 0.88 -0.5 2,891,107 + BWI76_RS13860 0.88 -0.6 2,891,131 + +0.5 2,891,137 - -0.2 2,891,139 - +0.2 2,891,142 + +1.6 2,891,154 + -1.7 2,891,154 + -0.5 2,891,160 - +0.7 2,891,160 - -0.4 2,891,162 - +0.1 2,891,164 + -1.8 2,891,164 + +0.4 2,891,167 + -0.3 2,891,167 + +2.1 2,891,174 + +0.5 2,891,174 + +0.3 2,891,174 + +0.4 2,891,174 + -0.0 2,891,174 + +1.7 2,891,175 - -1.4 2,891,179 + -0.2 2,891,180 - -1.9 2,891,182 - -0.3 2,891,184 + +0.2 2,891,186 + +0.4 2,891,187 - +0.7 2,891,195 - +1.3 2,891,195 - -0.7 2,891,240 - +1.8 2,891,381 - -0.3 2,891,430 + -2.4 2,891,438 + -0.4 2,891,446 - +0.2 2,891,456 + +0.8 2,891,461 + +0.4 2,891,466 + -1.0 2,891,500 + -0.1 2,891,506 - -0.7 2,891,511 + BWI76_RS13865 0.11 -1.5 2,891,627 - BWI76_RS13865 0.24 -0.1 2,891,628 - BWI76_RS13865 0.24 -1.3 2,891,637 + BWI76_RS13865 0.25 -0.4 2,891,645 - BWI76_RS13865 0.26 +1.5 2,891,653 - BWI76_RS13865 0.27 -0.8 2,891,701 - BWI76_RS13865 0.32 +0.1 2,891,723 - BWI76_RS13865 0.34 -0.1 2,891,783 + BWI76_RS13865 0.41 +0.5 2,891,858 + BWI76_RS13865 0.49 +0.6 2,892,000 - BWI76_RS13865 0.65 -0.7 2,892,004 - BWI76_RS13865 0.65 +0.9 2,892,015 - BWI76_RS13865 0.67 -0.5 2,892,015 - BWI76_RS13865 0.67 -0.5 2,892,058 - BWI76_RS13865 0.71 -1.9 2,892,115 - BWI76_RS13865 0.78 -0.2 2,892,115 - BWI76_RS13865 0.78 +0.6 2,892,171 + BWI76_RS13865 0.84 +0.2
Or see this region's nucleotide sequence