Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_29320

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
6,369,027	+				-0.6
6,369,027	+				-3.0
6,369,028	-				+0.0
6,369,028	-				+0.4
6,369,059	-				-1.6
6,369,059	-				-3.0
6,369,224	+		AO353_29315	0.17	-2.4
6,369,224	+				+0.6
6,369,224	+		AO353_29315	0.17	-0.2
6,369,225	-		AO353_29315	0.17	-0.6
6,369,225	-		AO353_29315	0.17	-0.4
6,369,236	+		AO353_29315	0.18	-0.8
6,369,236	+		AO353_29315	0.18	-1.8
6,369,236	+		AO353_29315	0.18	-1.0
6,369,236	+		AO353_29315	0.18	-1.0
6,369,236	+		AO353_29315	0.18	-1.3
6,369,236	+		AO353_29315	0.18	-2.0
6,369,237	-		AO353_29315	0.18	-0.1
6,369,237	-		AO353_29315	0.18	-1.4
6,369,237	-		AO353_29315	0.18	-2.6
6,369,237	-		AO353_29315	0.18	-3.0
6,369,237	-		AO353_29315	0.18	-2.3
6,369,284	+		AO353_29315	0.24	-1.6
6,369,284	+		AO353_29315	0.24	-2.0
6,369,285	-		AO353_29315	0.24	-1.2
6,369,285	-		AO353_29315	0.24	-0.3
6,369,311	+		AO353_29315	0.27	-0.8
6,369,311	+		AO353_29315	0.27	-2.5
6,369,311	+		AO353_29315	0.27	-1.2
6,369,312	-		AO353_29315	0.27	-1.2
6,369,312	-		AO353_29315	0.27	-1.1
6,369,312	-		AO353_29315	0.27	-0.5
6,369,312	-		AO353_29315	0.27	-1.7
6,369,312	-		AO353_29315	0.27	-1.3
6,369,312	-		AO353_29315	0.27	-2.4
6,369,312	-		AO353_29315	0.27	-1.4
6,369,312	-		AO353_29315	0.27	-1.7
6,369,312	-		AO353_29315	0.27	-1.2
6,369,324	-		AO353_29315	0.28	-1.8
6,369,393	-		AO353_29315	0.36	-1.4
6,369,482	+		AO353_29315	0.45	-0.7
6,369,482	+		AO353_29315	0.45	-0.5
6,369,482	+		AO353_29315	0.45	-1.2
6,369,482	+		AO353_29315	0.45	-0.3
6,369,482	+		AO353_29315	0.45	-2.3
6,369,482	+		AO353_29315	0.45	-0.9
6,369,482	+		AO353_29315	0.45	-0.4
6,369,482	+		AO353_29315	0.45	-1.0
6,369,483	-		AO353_29315	0.45	-0.9
6,369,590	+		AO353_29315	0.57	-0.0
6,369,590	+		AO353_29315	0.57	-1.7
6,369,590	+		AO353_29315	0.57	-2.3
6,369,591	-		AO353_29315	0.57	-2.2
6,369,591	-		AO353_29315	0.57	+0.8
6,369,591	-		AO353_29315	0.57	-1.0
6,369,605	+		AO353_29315	0.59	-1.0
6,369,605	+		AO353_29315	0.59	-0.7
6,369,605	+		AO353_29315	0.59	-1.9
6,369,605	+		AO353_29315	0.59	-0.4
6,369,605	+		AO353_29315	0.59	-3.3
6,369,605	+		AO353_29315	0.59	-1.4
6,369,605	+		AO353_29315	0.59	+0.8
6,369,605	+		AO353_29315	0.59	+0.2
6,369,605	+		AO353_29315	0.59	-0.0
6,369,605	+		AO353_29315	0.59	-2.8
6,369,605	+		AO353_29315	0.59	-0.8
6,369,606	-		AO353_29315	0.59	-0.9
6,369,606	-		AO353_29315	0.59	-1.8
6,369,606	-		AO353_29315	0.59	-1.2
6,369,606	-		AO353_29315	0.59	-1.6
6,369,606	-		AO353_29315	0.59	-1.8
6,369,606	-		AO353_29315	0.59	-1.2
6,369,606	-		AO353_29315	0.59	-0.8
6,369,606	-		AO353_29315	0.59	-0.4
6,369,606	-		AO353_29315	0.59	-1.5
6,369,606	-				+0.8
6,369,612	-		AO353_29315	0.59	-0.3
6,369,639	-		AO353_29315	0.62	-0.4
6,369,639	-		AO353_29315	0.62	-0.5
6,370,033	+				-0.0
6,370,034	-				-1.2
6,370,034	-				-2.1
6,370,034	-				-1.4
6,370,034	-				-1.6
6,370,034	-				+0.3
6,370,034	-				-1.7
6,370,034	-				-0.4
6,370,034	-				+0.8
6,370,034	-				-0.4
6,370,034	-				-1.8
6,370,034	-				-3.6
6,370,061	-				-0.6
6,370,061	-				-0.3
6,370,061	-				-0.4
6,370,061	-				-2.1
6,370,117	+		AO353_29320	0.15	-1.0
6,370,117	+		AO353_29320	0.15	+1.6
6,370,117	+		AO353_29320	0.15	-1.3
6,370,117	+		AO353_29320	0.15	+0.1
6,370,117	+		AO353_29320	0.15	-1.4
6,370,117	+		AO353_29320	0.15	+0.4
6,370,117	+		AO353_29320	0.15	-2.0
6,370,118	-		AO353_29320	0.15	-1.2
6,370,184	-		AO353_29320	0.23	+0.2
6,370,184	-		AO353_29320	0.23	-2.2
6,370,184	-		AO353_29320	0.23	-1.9
6,370,184	-		AO353_29320	0.23	-1.3
6,370,184	-		AO353_29320	0.23	-1.2
6,370,184	-		AO353_29320	0.23	-1.8
6,370,184	-		AO353_29320	0.23	-1.8
6,370,184	-		AO353_29320	0.23	-0.9
6,370,184	-		AO353_29320	0.23	-0.4
6,370,423	+		AO353_29320	0.49	-2.1
6,370,423	+		AO353_29320	0.49	-0.4
6,370,747	+		AO353_29320	0.85	-1.4
6,370,748	-		AO353_29320	0.85	+0.7
6,370,876	+				-0.7
6,370,910	+				-0.4
6,370,910	+				-1.8
6,370,910	+				+0.8
6,370,910	+				+0.6
6,370,911	-				-1.8
6,370,911	-				-0.2
6,370,911	-				-0.0
6,370,963	+				-0.9
6,371,070	+				+0.4
6,371,070	+				+1.3
6,371,071	-				-1.0
6,371,071	-				+1.1
6,371,073	+				-0.3
6,371,073	+				+1.5
6,371,074	-				+1.0
6,371,074	-				+0.8
6,371,074	-				-1.9
6,371,074	-				-0.6
6,371,074	-				+1.1
6,371,295	+		AO353_29325	0.16	+0.2
6,371,301	+		AO353_29325	0.17	-0.1
6,371,302	-		AO353_29325	0.17	-2.2
6,371,302	-		AO353_29325	0.17	-0.1
6,371,333	+		AO353_29325	0.19	-1.0
6,371,334	-		AO353_29325	0.19	-0.4
6,371,334	-				-0.0
6,371,506	+		AO353_29325	0.32	+1.0
6,371,508	+		AO353_29325	0.32	-1.3
6,371,508	+		AO353_29325	0.32	+1.5
6,371,508	+		AO353_29325	0.32	+0.4
6,371,509	-		AO353_29325	0.32	-2.1
6,371,562	+		AO353_29325	0.36	+0.6
6,371,562	+		AO353_29325	0.36	+2.6
6,371,563	-		AO353_29325	0.36	-0.0
6,371,563	-		AO353_29325	0.36	+1.2
6,371,563	-		AO353_29325	0.36	+0.6
6,371,563	-		AO353_29325	0.36	-1.9
6,371,563	-		AO353_29325	0.36	+1.1
6,371,628	+		AO353_29325	0.40	+0.9
6,371,628	+		AO353_29325	0.40	-1.6
6,371,628	+		AO353_29325	0.40	+0.2
6,371,629	-		AO353_29325	0.41	-1.2
6,371,629	-		AO353_29325	0.41	-0.3
6,371,629	-		AO353_29325	0.41	+0.7
6,371,629	-		AO353_29325	0.41	+0.2