Experiment: chromate 0.000005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3604 and Pf6N2E2_3605 are separated by 28 nucleotides Pf6N2E2_3605 and Pf6N2E2_3606 are separated by 306 nucleotides Pf6N2E2_3606 and Pf6N2E2_3607 overlap by 4 nucleotides
Pf6N2E2_3604 - SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent, at 4,195,474 to 4,195,704
_3604
Pf6N2E2_3605 - SSU ribosomal protein S6p, at 4,195,733 to 4,196,161
_3605
Pf6N2E2_3606 - 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-), at 4,196,468 to 4,197,226
_3606
Pf6N2E2_3607 - 3'-to-5' exoribonuclease RNase R, at 4,197,223 to 4,199,853
_3607
Position (kb)
4196
4197
4198 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4196.251 kb on - strand at 4196.251 kb on - strand at 4196.323 kb on - strand at 4196.418 kb on + strand at 4196.418 kb on + strand at 4196.419 kb on - strand at 4196.419 kb on - strand at 4196.456 kb on + strand at 4196.456 kb on + strand at 4196.457 kb on - strand at 4196.457 kb on - strand at 4196.457 kb on - strand at 4196.457 kb on - strand at 4196.590 kb on - strand, within Pf6N2E2_3606 at 4196.676 kb on + strand, within Pf6N2E2_3606 at 4196.676 kb on + strand, within Pf6N2E2_3606 at 4196.676 kb on + strand, within Pf6N2E2_3606 at 4196.676 kb on + strand, within Pf6N2E2_3606 at 4196.676 kb on + strand, within Pf6N2E2_3606 at 4196.676 kb on + strand, within Pf6N2E2_3606 at 4196.677 kb on - strand, within Pf6N2E2_3606 at 4196.677 kb on - strand, within Pf6N2E2_3606 at 4196.677 kb on - strand, within Pf6N2E2_3606 at 4196.677 kb on - strand, within Pf6N2E2_3606 at 4196.677 kb on - strand, within Pf6N2E2_3606 at 4196.677 kb on - strand, within Pf6N2E2_3606 at 4196.677 kb on - strand, within Pf6N2E2_3606 at 4196.677 kb on - strand, within Pf6N2E2_3606 at 4196.677 kb on - strand, within Pf6N2E2_3606 at 4196.680 kb on + strand, within Pf6N2E2_3606 at 4196.680 kb on + strand, within Pf6N2E2_3606 at 4196.680 kb on + strand, within Pf6N2E2_3606 at 4196.681 kb on - strand, within Pf6N2E2_3606 at 4196.681 kb on - strand, within Pf6N2E2_3606 at 4196.681 kb on - strand, within Pf6N2E2_3606 at 4196.681 kb on - strand, within Pf6N2E2_3606 at 4196.681 kb on - strand, within Pf6N2E2_3606 at 4196.843 kb on - strand, within Pf6N2E2_3606 at 4196.902 kb on + strand, within Pf6N2E2_3606 at 4197.005 kb on + strand, within Pf6N2E2_3606 at 4197.006 kb on - strand, within Pf6N2E2_3606 at 4197.166 kb on + strand at 4197.238 kb on - strand at 4197.238 kb on - strand at 4197.295 kb on - strand at 4197.303 kb on + strand at 4197.303 kb on + strand at 4197.303 kb on + strand at 4197.303 kb on + strand at 4197.303 kb on + strand at 4197.304 kb on - strand at 4197.304 kb on - strand at 4197.304 kb on - strand at 4197.304 kb on - strand at 4197.361 kb on - strand at 4197.538 kb on - strand, within Pf6N2E2_3607 at 4197.740 kb on + strand, within Pf6N2E2_3607 at 4197.740 kb on + strand, within Pf6N2E2_3607 at 4197.741 kb on - strand, within Pf6N2E2_3607 at 4197.741 kb on - strand, within Pf6N2E2_3607 at 4197.741 kb on - strand, within Pf6N2E2_3607 at 4197.741 kb on - strand, within Pf6N2E2_3607 at 4197.743 kb on + strand, within Pf6N2E2_3607 at 4197.744 kb on - strand, within Pf6N2E2_3607 at 4197.744 kb on - strand, within Pf6N2E2_3607 at 4197.744 kb on - strand, within Pf6N2E2_3607 at 4197.785 kb on + strand, within Pf6N2E2_3607 at 4197.785 kb on + strand, within Pf6N2E2_3607 at 4197.785 kb on + strand, within Pf6N2E2_3607 at 4197.785 kb on + strand, within Pf6N2E2_3607 at 4197.786 kb on - strand, within Pf6N2E2_3607 at 4197.786 kb on - strand, within Pf6N2E2_3607 at 4197.786 kb on - strand, within Pf6N2E2_3607 at 4197.980 kb on + strand, within Pf6N2E2_3607 at 4197.981 kb on - strand, within Pf6N2E2_3607 at 4198.118 kb on + strand, within Pf6N2E2_3607 at 4198.119 kb on - strand, within Pf6N2E2_3607 at 4198.127 kb on + strand, within Pf6N2E2_3607 at 4198.163 kb on + strand, within Pf6N2E2_3607 at 4198.164 kb on - strand, within Pf6N2E2_3607
Per-strain Table
Position Strand Gene LocusTag Fraction chromate 0.000005 M remove 4,196,251 - -0.9 4,196,251 - +0.1 4,196,323 - -0.9 4,196,418 + -0.9 4,196,418 + +0.2 4,196,419 - -1.3 4,196,419 - +0.2 4,196,456 + +0.3 4,196,456 + -0.5 4,196,457 - -0.4 4,196,457 - -1.3 4,196,457 - +0.1 4,196,457 - +0.3 4,196,590 - Pf6N2E2_3606 0.16 -0.3 4,196,676 + Pf6N2E2_3606 0.27 -0.7 4,196,676 + Pf6N2E2_3606 0.27 -0.7 4,196,676 + Pf6N2E2_3606 0.27 -1.0 4,196,676 + Pf6N2E2_3606 0.27 +0.1 4,196,676 + Pf6N2E2_3606 0.27 -0.3 4,196,676 + Pf6N2E2_3606 0.27 +0.2 4,196,677 - Pf6N2E2_3606 0.28 +0.3 4,196,677 - Pf6N2E2_3606 0.28 -0.4 4,196,677 - Pf6N2E2_3606 0.28 +0.2 4,196,677 - Pf6N2E2_3606 0.28 -0.1 4,196,677 - Pf6N2E2_3606 0.28 -0.4 4,196,677 - Pf6N2E2_3606 0.28 +0.8 4,196,677 - Pf6N2E2_3606 0.28 +1.4 4,196,677 - Pf6N2E2_3606 0.28 -0.7 4,196,677 - Pf6N2E2_3606 0.28 +0.7 4,196,680 + Pf6N2E2_3606 0.28 -0.1 4,196,680 + Pf6N2E2_3606 0.28 +0.3 4,196,680 + Pf6N2E2_3606 0.28 -0.4 4,196,681 - Pf6N2E2_3606 0.28 +0.2 4,196,681 - Pf6N2E2_3606 0.28 +0.1 4,196,681 - Pf6N2E2_3606 0.28 -0.3 4,196,681 - Pf6N2E2_3606 0.28 +0.2 4,196,681 - Pf6N2E2_3606 0.28 +0.1 4,196,843 - Pf6N2E2_3606 0.49 +0.6 4,196,902 + Pf6N2E2_3606 0.57 +0.1 4,197,005 + Pf6N2E2_3606 0.71 -0.7 4,197,006 - Pf6N2E2_3606 0.71 +0.6 4,197,166 + -0.7 4,197,238 - +0.3 4,197,238 - +0.2 4,197,295 - -0.8 4,197,303 + -1.3 4,197,303 + -0.1 4,197,303 + -0.6 4,197,303 + -1.0 4,197,303 + -0.9 4,197,304 - +0.3 4,197,304 - +0.3 4,197,304 - -0.8 4,197,304 - +2.1 4,197,361 - +0.8 4,197,538 - Pf6N2E2_3607 0.12 -0.4 4,197,740 + Pf6N2E2_3607 0.20 -0.9 4,197,740 + Pf6N2E2_3607 0.20 -2.6 4,197,741 - Pf6N2E2_3607 0.20 -0.6 4,197,741 - Pf6N2E2_3607 0.20 -1.0 4,197,741 - Pf6N2E2_3607 0.20 +0.1 4,197,741 - Pf6N2E2_3607 0.20 +0.6 4,197,743 + Pf6N2E2_3607 0.20 +1.6 4,197,744 - Pf6N2E2_3607 0.20 -0.2 4,197,744 - Pf6N2E2_3607 0.20 -0.5 4,197,744 - Pf6N2E2_3607 0.20 -1.1 4,197,785 + Pf6N2E2_3607 0.21 +0.1 4,197,785 + Pf6N2E2_3607 0.21 -0.0 4,197,785 + Pf6N2E2_3607 0.21 +0.8 4,197,785 + Pf6N2E2_3607 0.21 +0.1 4,197,786 - Pf6N2E2_3607 0.21 -0.6 4,197,786 - Pf6N2E2_3607 0.21 -0.2 4,197,786 - Pf6N2E2_3607 0.21 -1.4 4,197,980 + Pf6N2E2_3607 0.29 -0.5 4,197,981 - Pf6N2E2_3607 0.29 +0.3 4,198,118 + Pf6N2E2_3607 0.34 -1.5 4,198,119 - Pf6N2E2_3607 0.34 +0.5 4,198,127 + Pf6N2E2_3607 0.34 -0.1 4,198,163 + Pf6N2E2_3607 0.36 +0.1 4,198,164 - Pf6N2E2_3607 0.36 +0.4
Or see this region's nucleotide sequence