Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08370
Experiment: Formate McCas no stress control 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Formate McCas no stress control 1 |
---|---|---|---|---|---|
remove | |||||
1,571,549 | - | MMP_RS08365 | 0.54 | -0.4 | |
1,571,618 | - | MMP_RS08365 | 0.59 | -0.6 | |
1,571,618 | - | MMP_RS08365 | 0.59 | -0.3 | |
1,571,618 | - | MMP_RS08365 | 0.59 | +0.5 | |
1,571,882 | - | MMP_RS08365 | 0.77 | +0.6 | |
1,572,004 | + | MMP_RS08365 | 0.86 | -0.2 | |
1,572,111 | + | +0.1 | |||
1,572,292 | + | MMP_RS08370 | 0.15 | -0.5 | |
1,572,667 | - | -0.1 | |||
1,572,697 | - | -0.4 | |||
1,572,697 | - | -0.4 | |||
1,572,698 | + | -0.8 | |||
1,572,699 | - | -1.2 | |||
1,572,700 | + | -0.4 | |||
1,572,700 | + | +0.6 | |||
1,572,700 | + | -0.1 | |||
1,572,701 | - | -2.9 | |||
1,572,714 | + | -0.5 | |||
1,573,215 | + | -2.0 | |||
1,573,472 | - | -0.4 |
Or see this region's nucleotide sequence