Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07775

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,470,853	+		MMP_RS07770	0.30	+0.2
1,470,853	+		MMP_RS07770	0.30	+0.1
1,470,895	+		MMP_RS07770	0.33	-0.0
1,470,966	-		MMP_RS07770	0.40	-0.2
1,470,967	+		MMP_RS07770	0.40	+0.4
1,470,984	-		MMP_RS07770	0.41	+0.6
1,470,989	-		MMP_RS07770	0.42	+0.3
1,471,117	-		MMP_RS07770	0.53	-0.0
1,471,657	-				+0.6
1,471,658	+				+0.2
1,472,194	-		MMP_RS07775	0.44	-0.3
1,472,300	-		MMP_RS07775	0.53	-0.8
1,472,324	-		MMP_RS07775	0.56	-0.3
1,472,512	-		MMP_RS07775	0.72	-0.5
1,472,513	+		MMP_RS07775	0.72	-0.3
1,472,542	+		MMP_RS07775	0.75	-0.6
1,472,771	+				-0.2
1,472,840	+				-0.2
1,472,876	-				-0.7
1,472,879	-				-0.3
1,472,893	+				-0.2
1,473,010	-				+0.3
1,473,010	-				-0.5
1,473,011	+				-0.6
1,473,021	-				-0.2
1,473,083	-				-1.2
1,473,084	+				-1.1
1,473,087	+				-1.7
1,473,087	+				+0.4
1,473,208	-				-1.0
1,473,236	-				-1.6
1,473,277	-				-1.7
1,473,530	-				-2.8
1,473,535	+				-2.7
1,473,535	+				-0.0
1,473,653	-				-2.2
1,473,772	+				-0.7
1,473,774	-				-3.0
1,473,806	-				-1.0
1,473,807	+				-4.0
1,473,807	+				-2.7