Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07635

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,443,900	-				-0.1
1,443,900	-				-0.4
1,443,900	-				+0.8
1,443,936	+				-0.6
1,443,947	+				-0.0
1,443,992	-				-1.4
1,443,998	-				-1.3
1,444,006	-				-0.1
1,444,006	-				-0.6
1,444,007	+				-0.0
1,444,254	+		MMP_RS07630	0.27	-2.2
1,444,280	-		MMP_RS07630	0.30	-0.3
1,444,740	+		MMP_RS07630	0.85	-1.1
1,444,810	-				-0.7
1,444,816	+				-1.2
1,444,910	+				-3.9
1,445,008	-		MMP_RS07635	0.29	-3.8
1,445,032	-		MMP_RS07635	0.34	-1.0
1,445,033	+		MMP_RS07635	0.34	-2.7
1,445,051	-		MMP_RS07635	0.38	-3.8
1,445,051	-		MMP_RS07635	0.38	-1.8
1,445,052	+		MMP_RS07635	0.38	-0.6
1,445,064	+		MMP_RS07635	0.41	-2.7
1,445,064	+		MMP_RS07635	0.41	-2.5
1,445,141	-		MMP_RS07635	0.57	-1.4
1,445,142	+		MMP_RS07635	0.57	-3.2
1,445,142	+		MMP_RS07635	0.57	-2.4
1,445,146	+		MMP_RS07635	0.58	-3.6
1,445,168	-		MMP_RS07635	0.62	-4.2
1,445,169	+		MMP_RS07635	0.62	-3.7
1,445,173	-		MMP_RS07635	0.63	-2.9
1,445,176	-		MMP_RS07635	0.64	-2.7
1,445,208	-		MMP_RS07635	0.70	-4.3
1,445,360	-				-0.3
1,445,712	+		MMP_RS07640	0.42	+0.1
1,445,735	-		MMP_RS07640	0.45	-0.0
1,445,873	+		MMP_RS07640	0.62	+0.0
1,445,873	+		MMP_RS07640	0.62	-0.4
1,445,976	+		MMP_RS07640	0.75	-0.3
1,446,006	+		MMP_RS07640	0.78	-0.3
1,446,071	+		MMP_RS07640	0.87	+0.4
1,446,145	-				-0.8
1,446,204	+				-0.8
1,446,228	-				-0.3
1,446,233	-				+0.2
1,446,252	+				-0.0
1,446,256	-				+0.6
1,446,272	+				+0.9