Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07555

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,429,071	-		MMP_RS07550	0.27	+0.0
1,429,107	+		MMP_RS07550	0.30	+0.3
1,429,299	+		MMP_RS07550	0.46	+0.8
1,429,307	-		MMP_RS07550	0.47	+0.2
1,429,386	-		MMP_RS07550	0.53	+0.3
1,429,387	+		MMP_RS07550	0.53	+0.0
1,429,418	-		MMP_RS07550	0.56	-0.7
1,429,418	-		MMP_RS07550	0.56	+0.3
1,429,418	-		MMP_RS07550	0.56	+0.5
1,429,419	+		MMP_RS07550	0.56	+0.6
1,429,419	+		MMP_RS07550	0.56	+0.5
1,429,420	-		MMP_RS07550	0.56	-0.1
1,429,421	+		MMP_RS07550	0.56	-0.1
1,429,494	+		MMP_RS07550	0.62	-0.2
1,429,641	-		MMP_RS07550	0.75	-0.1
1,429,661	-		MMP_RS07550	0.76	+0.3
1,429,714	+		MMP_RS07550	0.81	+0.4
1,429,743	+		MMP_RS07550	0.83	+0.2
1,429,784	-		MMP_RS07550	0.87	+0.0
1,429,917	-				-0.2
1,429,940	-				+0.3
1,429,978	+				-0.1
1,430,013	-				-0.2
1,430,017	-				+0.2
1,430,018	+				-1.0
1,430,068	+		MMP_RS07555	0.23	-0.8
1,430,350	-				-0.9
1,430,354	-				+0.0
1,430,355	+				-1.7
1,430,356	-				+0.2
1,430,356	-				-0.9
1,430,358	-				-0.1
1,430,359	+				-0.5
1,430,359	+				-0.5
1,430,359	+				+0.5
1,430,360	-				+0.4
1,430,360	-				-0.2
1,430,361	+				-0.6
1,430,361	+				+1.2
1,430,364	-				-0.1
1,430,452	-				+0.4
1,430,453	+				-0.4
1,430,456	-				+0.1
1,430,456	-				-0.4
1,430,555	+		MMP_RS07560	0.15	+0.6
1,430,745	-		MMP_RS07560	0.59	+1.1
1,430,746	+		MMP_RS07560	0.59	-0.0
1,430,746	+		MMP_RS07560	0.59	+0.4
1,430,809	+		MMP_RS07560	0.74	-0.0
1,430,809	+		MMP_RS07560	0.74	+0.3
1,430,921	-				-0.4
1,430,973	+				+0.7
1,431,043	+				+0.4