Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06315

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,215,648	+		MMP_RS06310	0.26	-1.1
1,215,664	-		MMP_RS06310	0.27	-0.6
1,215,895	+		MMP_RS06310	0.47	-2.0
1,215,928	-		MMP_RS06310	0.50	+0.3
1,216,012	+		MMP_RS06310	0.58	+0.7
1,216,100	+		MMP_RS06310	0.65	-0.2
1,216,128	-		MMP_RS06310	0.68	-0.9
1,216,129	+		MMP_RS06310	0.68	+0.5
1,216,192	+		MMP_RS06310	0.73	+0.2
1,216,506	-				+0.3
1,216,550	-				-0.6
1,216,550	-				+0.4
1,216,553	+				-1.2
1,216,555	-				+0.4
1,216,572	-				-0.5
1,216,573	+				-0.7
1,216,573	+				+0.0
1,216,998	-		MMP_RS06315	0.61	-3.3
1,216,999	+		MMP_RS06315	0.61	-1.0
1,217,233	-				-1.0
1,217,236	+				-1.3
1,217,386	-		MMP_RS06320	0.19	-0.3
1,217,391	+		MMP_RS06320	0.20	+0.0
1,217,396	-		MMP_RS06320	0.21	+0.2
1,217,396	-		MMP_RS06320	0.21	-0.1
1,217,397	+		MMP_RS06320	0.21	-0.1
1,217,401	-		MMP_RS06320	0.21	-0.2
1,217,472	-		MMP_RS06320	0.32	+0.3
1,217,612	-		MMP_RS06320	0.54	+0.1
1,217,826	-		MMP_RS06320	0.88	+0.3
1,217,864	-				+0.2
1,217,901	-				+0.6
1,217,963	-				-0.4
1,217,966	-				+0.1
1,217,992	-				-0.1
1,217,993	+				-0.5
1,218,004	+				+0.2
1,218,005	-				-1.0
1,218,070	+		MMP_RS06325	0.24	+0.1