Strain Fitness in Methanococcus maripaludis S2 around MMP_RS03475
Experiment: Formate McCas no stress control 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Formate McCas no stress control 1 |
---|---|---|---|---|---|
remove | |||||
651,102 | - | +0.1 | |||
651,139 | + | -0.3 | |||
651,147 | + | -0.3 | |||
651,163 | - | -0.7 | |||
651,170 | - | -0.2 | |||
651,511 | - | MMP_RS03470 | 0.37 | -0.2 | |
651,559 | + | MMP_RS03470 | 0.43 | -0.5 | |
651,751 | - | MMP_RS03470 | 0.65 | -1.2 | |
651,752 | + | MMP_RS03470 | 0.65 | -0.6 | |
651,752 | + | MMP_RS03470 | 0.65 | -0.4 | |
651,752 | + | MMP_RS03470 | 0.65 | -0.3 | |
651,752 | + | MMP_RS03470 | 0.65 | -0.4 | |
651,780 | - | MMP_RS03470 | 0.68 | -1.0 | |
651,793 | - | MMP_RS03470 | 0.69 | -0.9 | |
651,793 | - | MMP_RS03470 | 0.69 | -0.8 | |
651,797 | - | MMP_RS03470 | 0.70 | -1.0 | |
651,804 | - | MMP_RS03470 | 0.71 | -0.8 | |
651,941 | + | MMP_RS03470 | 0.86 | -0.1 | |
652,137 | + | MMP_RS03475 | 0.35 | -3.1 | |
652,266 | - | -0.0 | |||
652,271 | - | +0.2 | |||
652,387 | + | -0.1 | |||
652,531 | - | MMP_RS03480 | 0.12 | -0.4 | |
652,531 | - | MMP_RS03480 | 0.12 | -0.0 | |
652,532 | + | MMP_RS03480 | 0.12 | +0.1 | |
652,578 | - | MMP_RS03480 | 0.15 | -0.7 | |
652,588 | - | MMP_RS03480 | 0.15 | -0.1 | |
652,922 | + | MMP_RS03480 | 0.36 | +0.1 | |
652,963 | + | MMP_RS03480 | 0.39 | +0.2 | |
653,107 | - | MMP_RS03480 | 0.48 | +0.3 | |
653,219 | + | MMP_RS03480 | 0.54 | -0.3 | |
653,219 | + | MMP_RS03480 | 0.54 | -0.3 |
Or see this region's nucleotide sequence