Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07770

Experiment: Carnitine Hydrochloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (N)
1,709,770	-		AO353_07760	0.84	-1.3
1,709,912	-				+0.4
1,709,912	-				-0.0
1,709,912	-				-0.1
1,709,959	+				+0.8
1,709,959	+				+0.2
1,709,959	+				-0.7
1,709,959	+				+0.0
1,709,960	-				-1.3
1,710,012	+				+0.9
1,710,013	-				-2.7
1,710,013	-				-0.2
1,710,020	+				+0.5
1,710,020	+				-0.1
1,710,021	-				+0.9
1,710,146	+				-2.3
1,710,146	+				+1.4
1,710,146	+				-0.2
1,710,146	+				+1.0
1,710,147	-				+0.5
1,710,147	-				-1.2
1,710,147	-				+0.0
1,710,147	-				+1.6
1,710,212	+				+1.3
1,710,233	-				+0.8
1,710,253	+				+0.2
1,710,253	+				+0.7
1,710,253	+				+1.9
1,710,253	+				-1.1
1,710,253	+				-0.9
1,710,253	+				+0.5
1,710,253	+				-0.8
1,710,253	+				+1.1
1,710,253	+				+0.5
1,710,253	+				-0.2
1,710,253	+				+0.4
1,710,254	-				-0.9
1,710,254	-				-1.1
1,710,254	-				-0.5
1,710,254	-				+1.0
1,710,254	-				-0.2
1,710,254	-				-0.5
1,710,254	-				-1.6
1,710,254	-				-2.5
1,710,254	-				+0.8
1,710,254	-				+0.6
1,710,254	-				-0.5
1,710,254	-				-0.8
1,710,254	-				-1.1
1,710,254	-				-0.0
1,710,254	-				-0.6
1,710,257	+				-0.6
1,710,257	+				+0.2
1,710,258	-				+0.7
1,710,258	-				+0.9
1,710,258	-				-0.6
1,710,258	-				+0.2
1,710,459	+		AO353_07765	0.41	-1.6
1,710,485	+		AO353_07765	0.51	-1.6
1,710,485	+		AO353_07765	0.51	+1.0
1,710,486	-		AO353_07765	0.52	+1.8
1,710,511	+		AO353_07765	0.61	-1.0
1,710,511	+		AO353_07765	0.61	-2.1
1,710,511	+		AO353_07765	0.61	-1.5
1,710,511	+		AO353_07765	0.61	+0.0
1,710,511	+		AO353_07765	0.61	+0.1
1,710,511	+		AO353_07765	0.61	+0.0
1,710,511	+		AO353_07765	0.61	+0.2
1,710,511	+		AO353_07765	0.61	-1.0
1,710,512	-		AO353_07765	0.61	-0.7
1,710,512	-		AO353_07765	0.61	+0.1
1,710,512	-		AO353_07765	0.61	-2.1
1,710,512	-		AO353_07765	0.61	-1.6
1,710,512	-		AO353_07765	0.61	+0.6
1,710,512	-		AO353_07765	0.61	+0.2
1,710,512	-		AO353_07765	0.61	-1.0
1,710,512	-		AO353_07765	0.61	+0.5
1,710,512	-		AO353_07765	0.61	-0.6
1,710,512	-		AO353_07765	0.61	+0.1
1,710,512	-				-0.8
1,710,512	-		AO353_07765	0.61	+0.6
1,710,512	-		AO353_07765	0.61	-0.1
1,710,515	+		AO353_07765	0.62	-0.2
1,710,515	+		AO353_07765	0.62	-0.6
1,710,515	+		AO353_07765	0.62	+0.4
1,710,515	+		AO353_07765	0.62	-1.5
1,710,515	+		AO353_07765	0.62	+1.0
1,710,515	+		AO353_07765	0.62	+1.0
1,710,515	+		AO353_07765	0.62	-0.8
1,710,515	+		AO353_07765	0.62	-0.6
1,710,515	+		AO353_07765	0.62	-0.3
1,710,515	+		AO353_07765	0.62	-0.6
1,710,515	+		AO353_07765	0.62	+0.3
1,710,515	+		AO353_07765	0.62	-0.7
1,710,515	+		AO353_07765	0.62	+0.7
1,710,515	+		AO353_07765	0.62	-0.5
1,710,515	+		AO353_07765	0.62	+0.1
1,710,515	+		AO353_07765	0.62	-0.1
1,710,515	+		AO353_07765	0.62	-0.6
1,710,515	+		AO353_07765	0.62	-0.6
1,710,516	-		AO353_07765	0.63	+1.1
1,710,516	-		AO353_07765	0.63	+0.5
1,710,516	-		AO353_07765	0.63	+0.8
1,710,516	-		AO353_07765	0.63	+0.8
1,710,516	-		AO353_07765	0.63	-0.3
1,710,516	-		AO353_07765	0.63	-0.8
1,710,516	-		AO353_07765	0.63	-0.5
1,710,516	-		AO353_07765	0.63	+0.5
1,710,516	-		AO353_07765	0.63	+0.6
1,710,516	-		AO353_07765	0.63	-0.6
1,710,516	-		AO353_07765	0.63	-0.3
1,710,516	-		AO353_07765	0.63	-0.1
1,710,516	-		AO353_07765	0.63	+1.4
1,710,516	-		AO353_07765	0.63	+0.8
1,710,532	+		AO353_07765	0.69	+0.7
1,710,532	+		AO353_07765	0.69	-0.7
1,710,533	-		AO353_07765	0.69	-2.0
1,710,591	-				-1.3
1,710,591	-				-0.5
1,710,591	-				-0.8
1,710,591	-				-0.3
1,710,767	+				-1.6
1,710,768	-				+1.7
1,710,768	-				-1.0
1,710,775	+				-1.3
1,710,775	+				+1.8
1,710,775	+				+0.8
1,710,775	+				+1.5
1,710,775	+				-1.0
1,710,775	+				-0.3
1,710,775	+				+1.1
1,710,775	+				+0.5
1,710,776	-				+0.6
1,710,776	-				+0.2
1,710,776	-				-0.4
1,710,776	-				+0.5
1,710,776	-				+1.5
1,710,929	+		AO353_07770	0.15	+1.4
1,710,930	-		AO353_07770	0.15	-2.3
1,711,056	-		AO353_07770	0.26	+0.8
1,711,080	-		AO353_07770	0.28	-2.5
1,711,080	-		AO353_07770	0.28	-0.4
1,711,080	-		AO353_07770	0.28	-0.5
1,711,255	-		AO353_07770	0.44	+1.7
1,711,268	+		AO353_07770	0.45	-1.6
1,711,268	+		AO353_07770	0.45	-1.6
1,711,710	+		AO353_07770	0.86	-1.6
1,711,710	+		AO353_07770	0.86	-2.4
1,711,721	+		AO353_07770	0.87	-1.8
1,711,721	+		AO353_07770	0.87	-0.0
1,711,721	+		AO353_07770	0.87	-0.8
1,711,721	+		AO353_07770	0.87	-0.3
1,711,721	+		AO353_07770	0.87	-1.3
1,711,721	+		AO353_07770	0.87	-0.5
1,711,722	-		AO353_07770	0.87	-0.8
1,711,722	-		AO353_07770	0.87	-2.1
1,711,722	-		AO353_07770	0.87	+1.5
1,711,722	-		AO353_07770	0.87	-0.5
1,711,722	-		AO353_07770	0.87	-0.6
1,711,765	+				-1.4
1,711,766	-				+0.6
1,711,766	-				-1.2
1,711,766	-				-2.4
1,711,875	+				+0.0
1,711,875	+				-0.8
1,711,876	-				+0.2
1,711,876	-				-1.0
1,711,982	+				-1.0
1,711,983	-				-0.8
1,712,003	+				-1.1
1,712,004	-				+0.9
1,712,033	+				-1.4
1,712,033	+				-1.9
1,712,033	+				-0.6
1,712,033	+				-0.5
1,712,033	+				-0.0
1,712,033	+				+0.5
1,712,033	+				+0.0
1,712,033	+				-0.2
1,712,033	+				-0.7
1,712,033	+				-1.5
1,712,033	+				-0.1
1,712,033	+				-2.0
1,712,033	+				-1.2
1,712,033	+				-2.7
1,712,033	+				+0.5
1,712,033	+				-0.0
1,712,033	+				-0.1
1,712,033	+				-0.1
1,712,034	-				-0.3
1,712,034	-				+1.5
1,712,034	-				-0.5
1,712,034	-				+0.3
1,712,034	-				+0.0
1,712,034	-				-1.2
1,712,034	-				+0.4
1,712,034	-				-1.2
1,712,034	-				-2.2
1,712,034	-				+0.8
1,712,034	-				+0.2
1,712,034	-				-0.2
1,712,034	-				+0.7
1,712,034	-				-0.2
1,712,034	-				+2.0
1,712,034	-				-1.0
1,712,034	-				-0.8
1,712,034	-				-1.1
1,712,034	-				-0.6
1,712,034	-				-0.4
1,712,035	+				+0.8
1,712,035	+				-0.2
1,712,035	+				-1.0
1,712,035	+				-1.3
1,712,035	+				-1.4
1,712,035	+				+1.0
1,712,035	+				+0.9
1,712,035	+				-1.1
1,712,035	+				+1.4
1,712,035	+				-0.5
1,712,035	+				-1.0
1,712,035	+				+0.4
1,712,035	+				-0.1
1,712,035	+				+1.5
1,712,035	+				+3.7
1,712,035	+				-1.1
1,712,035	+				+0.5
1,712,035	+				-1.2
1,712,035	+				-1.0
1,712,035	+				-0.6
1,712,035	+				+0.3
1,712,035	+				-1.3
1,712,035	+				-1.8
1,712,035	+				-2.0
1,712,035	+				-1.6
1,712,035	+				-1.0
1,712,036	-				-0.3
1,712,036	-				+0.6
1,712,036	-				+1.2
1,712,036	-				+1.0
1,712,036	-				+0.0
1,712,036	-				+1.1
1,712,036	-				-0.5
1,712,036	-				+0.4
1,712,036	-				-0.5
1,712,036	-				-1.1
1,712,036	-				-1.0
1,712,036	-				+0.2
1,712,036	-				-0.0
1,712,036	-				-0.2
1,712,036	-				-0.2
1,712,036	-				-0.1
1,712,036	-				+0.5
1,712,036	-				+0.4
1,712,036	-				+0.7
1,712,036	-				+0.4
1,712,036	-				+1.4
1,712,036	-				+0.9
1,712,036	-				-1.1
1,712,036	-				+1.6
1,712,036	-				-0.5
1,712,036	-				-0.4
1,712,036	-				+1.9
1,712,036	-				-0.5
1,712,036	-				-1.3
1,712,036	-				+0.5
1,712,036	-				+0.6
1,712,036	-				-0.6
1,712,036	-				-0.2
1,712,036	-				+0.4
1,712,036	-				+0.2
1,712,036	-				+0.1
1,712,036	-				+0.7
1,712,036	-				+0.2
1,712,036	-				-0.5
1,712,036	-				-1.2
1,712,036	-				+0.4
1,712,036	-				+0.4
1,712,043	+				-1.0
1,712,043	+				-1.4
1,712,043	+				-0.6
1,712,044	-				+1.0
1,712,044	-				+1.4
1,712,044	-				+1.4
1,712,044	-				+1.1
1,712,045	+				-1.5
1,712,045	+				+0.5
1,712,045	+				-0.6
1,712,045	+				-1.9
1,712,046	-				+0.4
1,712,046	-				-0.4
1,712,046	-				-1.0
1,712,046	-				-0.4
1,712,046	-				-1.6
1,712,046	-				-0.1
1,712,046	-				-0.8
1,712,228	+				-2.1
1,712,228	+				+0.1
1,712,228	+				-1.3
1,712,228	+				-1.3
1,712,228	+				-0.2
1,712,228	+				+0.3
1,712,228	+				-0.5
1,712,229	-				-0.3
1,712,229	-				-0.3
1,712,229	-				+1.1
1,712,229	-				-0.8
1,712,229	-				+0.2
1,712,229	-				-0.9
1,712,242	+				-0.2
1,712,243	-				+0.6
1,712,243	-				+0.7
1,712,277	-				+0.6
1,712,277	-				-0.6
1,712,363	+				-0.5
1,712,363	+				-0.5
1,712,364	-				-0.2
1,712,364	-				+0.5
1,712,364	-				+0.0
1,712,365	+				+0.4
1,712,365	+				+1.0
1,712,365	+				+0.2
1,712,365	+				-1.3
1,712,365	+				-1.3
1,712,365	+				+0.2
1,712,366	-				-0.1
1,712,369	+				-0.2
1,712,369	+				-2.5
1,712,369	+				-0.6
1,712,369	+				-1.8
1,712,370	-				+0.0
1,712,370	-				-1.6
1,712,370	-				+0.8
1,712,555	+		AO353_07775	0.17	+0.0
1,712,556	-		AO353_07775	0.17	-0.8
1,712,702	+		AO353_07775	0.28	+0.2
1,712,703	-		AO353_07775	0.28	+0.6
1,712,737	+		AO353_07775	0.31	-1.9
1,712,737	+		AO353_07775	0.31	-0.6
1,712,737	+		AO353_07775	0.31	+0.3
1,712,737	+		AO353_07775	0.31	-1.8
1,712,785	+		AO353_07775	0.34	-0.8
1,712,785	+		AO353_07775	0.34	+0.0
1,712,785	+		AO353_07775	0.34	-0.2
1,712,785	+		AO353_07775	0.34	-1.1
1,712,785	+		AO353_07775	0.34	+1.4
1,712,785	+		AO353_07775	0.34	+0.5
1,712,785	+		AO353_07775	0.34	+0.4
1,712,786	-		AO353_07775	0.34	-0.2
1,712,786	-		AO353_07775	0.34	-1.7
1,712,786	-		AO353_07775	0.34	-0.8
1,712,786	-		AO353_07775	0.34	-1.0
1,712,786	-		AO353_07775	0.34	+0.9