Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07695

Experiment: Carnitine Hydrochloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (N)
1,693,846	+		AO353_07685	0.46	+0.7
1,693,846	+		AO353_07685	0.46	+2.3
1,693,846	+		AO353_07685	0.46	+0.1
1,693,847	-		AO353_07685	0.46	+0.3
1,693,876	+		AO353_07685	0.54	-0.1
1,693,908	-		AO353_07685	0.64	+1.0
1,693,967	+		AO353_07685	0.82	+0.3
1,693,968	-		AO353_07685	0.82	-1.0
1,693,968	-		AO353_07685	0.82	+0.6
1,693,968	-		AO353_07685	0.82	-2.8
1,693,988	+		AO353_07685	0.88	-1.5
1,694,031	+				+0.9
1,694,032	-				+0.0
1,694,032	-				+1.3
1,694,096	-				-1.7
1,694,131	-				+0.7
1,694,150	-				+1.0
1,694,180	+				-0.5
1,694,184	+				+0.2
1,694,184	+				+1.1
1,694,184	+				-0.2
1,694,184	+				+0.1
1,694,184	+				-0.1
1,694,184	+				-0.7
1,694,184	+				-0.4
1,694,185	-				-0.2
1,694,185	-				+0.3
1,694,203	+				-1.8
1,694,204	-				+0.9
1,694,204	-				-2.0
1,694,238	-				-0.6
1,694,246	+				-0.2
1,694,246	+				+0.2
1,694,247	-				-1.6
1,694,247	-				-0.2
1,694,247	-				-0.1
1,694,247	-				-0.0
1,694,247	-				+0.4
1,694,255	+				+0.1
1,694,255	+				-0.0
1,694,255	+				-0.7
1,694,255	+				-0.2
1,694,255	+				+0.6
1,694,255	+				-0.7
1,694,255	+				+1.2
1,694,256	-				-0.5
1,694,256	-				+0.3
1,694,256	-				-2.0
1,694,304	+		AO353_07690	0.12	+0.7
1,694,305	-		AO353_07690	0.12	+0.0
1,694,305	-		AO353_07690	0.12	+0.1
1,694,333	+		AO353_07690	0.17	+0.6
1,694,333	+		AO353_07690	0.17	+1.8
1,694,334	-		AO353_07690	0.17	+0.3
1,694,334	-		AO353_07690	0.17	-1.0
1,694,364	-		AO353_07690	0.23	+1.3
1,694,411	+		AO353_07690	0.31	-0.8
1,694,417	+		AO353_07690	0.32	+0.5
1,694,417	+		AO353_07690	0.32	-0.1
1,694,417	+		AO353_07690	0.32	+0.3
1,694,417	+		AO353_07690	0.32	+1.3
1,694,418	-		AO353_07690	0.32	+1.7
1,694,479	+		AO353_07690	0.43	-0.7
1,694,479	+		AO353_07690	0.43	+0.7
1,694,480	-		AO353_07690	0.43	+1.2
1,694,480	-		AO353_07690	0.43	+0.2
1,694,480	-		AO353_07690	0.43	+0.6
1,694,483	+		AO353_07690	0.44	+0.5
1,694,483	+		AO353_07690	0.44	+1.1
1,694,483	+		AO353_07690	0.44	+0.3
1,694,483	+		AO353_07690	0.44	-0.4
1,694,483	+		AO353_07690	0.44	-0.5
1,694,483	+		AO353_07690	0.44	+0.5
1,694,484	-		AO353_07690	0.44	+0.8
1,694,484	-		AO353_07690	0.44	+0.3
1,694,484	-		AO353_07690	0.44	-1.0
1,694,484	-		AO353_07690	0.44	-0.1
1,694,484	-		AO353_07690	0.44	+0.1
1,694,484	-		AO353_07690	0.44	+0.9
1,694,484	-		AO353_07690	0.44	-0.5
1,694,484	-		AO353_07690	0.44	+0.3
1,694,484	-		AO353_07690	0.44	+0.2
1,694,514	-		AO353_07690	0.49	+0.2
1,694,570	+		AO353_07690	0.59	-0.7
1,694,570	+		AO353_07690	0.59	+0.4
1,694,570	+		AO353_07690	0.59	+1.2
1,694,570	+		AO353_07690	0.59	+0.9
1,694,570	+		AO353_07690	0.59	-0.2
1,694,570	+		AO353_07690	0.59	-0.2
1,694,570	+		AO353_07690	0.59	+0.0
1,694,570	+		AO353_07690	0.59	+1.1
1,694,570	+		AO353_07690	0.59	-0.5
1,694,570	+		AO353_07690	0.59	-0.5
1,694,570	+		AO353_07690	0.59	+0.0
1,694,570	+		AO353_07690	0.59	+0.1
1,694,570	+		AO353_07690	0.59	-0.6
1,694,570	+		AO353_07690	0.59	+0.3
1,694,570	+		AO353_07690	0.59	+0.1
1,694,570	+		AO353_07690	0.59	-0.7
1,694,570	+		AO353_07690	0.59	-2.5
1,694,570	+		AO353_07690	0.59	-0.1
1,694,570	+		AO353_07690	0.59	+1.1
1,694,570	+		AO353_07690	0.59	+0.0
1,694,570	+		AO353_07690	0.59	+0.5
1,694,570	+		AO353_07690	0.59	-0.1
1,694,570	+		AO353_07690	0.59	-0.2
1,694,571	-		AO353_07690	0.59	+0.5
1,694,571	-		AO353_07690	0.59	-1.0
1,694,571	-		AO353_07690	0.59	-0.6
1,694,571	-		AO353_07690	0.59	-0.3
1,694,571	-		AO353_07690	0.59	-0.1
1,694,571	-		AO353_07690	0.59	+0.3
1,694,571	-		AO353_07690	0.59	+1.2
1,694,571	-		AO353_07690	0.59	+0.6
1,694,571	-		AO353_07690	0.59	+1.6
1,694,571	-		AO353_07690	0.59	+0.4
1,694,571	-		AO353_07690	0.59	+0.5
1,694,571	-		AO353_07690	0.59	+0.1
1,694,571	-		AO353_07690	0.59	-0.1
1,694,571	-		AO353_07690	0.59	-1.0
1,694,571	-		AO353_07690	0.59	+0.3
1,694,571	-		AO353_07690	0.59	+1.2
1,694,571	-		AO353_07690	0.59	-0.4
1,694,571	-		AO353_07690	0.59	+0.4
1,694,571	-		AO353_07690	0.59	-0.4
1,694,571	-		AO353_07690	0.59	+0.1
1,694,571	-		AO353_07690	0.59	+0.4
1,694,627	+		AO353_07690	0.69	-0.3
1,694,628	-		AO353_07690	0.69	+1.7
1,694,654	+		AO353_07690	0.74	-1.8
1,694,714	+		AO353_07690	0.84	-0.2
1,694,714	+		AO353_07690	0.84	-1.4
1,694,714	+		AO353_07690	0.84	-0.8
1,694,715	-		AO353_07690	0.84	+1.1
1,694,715	-		AO353_07690	0.84	-0.5
1,694,715	-		AO353_07690	0.84	+0.1
1,694,715	-		AO353_07690	0.84	+0.0
1,694,804	+				+0.6
1,694,805	-				+0.3
1,694,805	-				-0.3
1,695,040	-		AO353_07695	0.28	-1.0
1,695,227	-		AO353_07695	0.52	-1.5
1,695,347	+		AO353_07695	0.68	-1.0
1,695,347	+		AO353_07695	0.68	-1.0
1,695,347	+		AO353_07695	0.68	-2.8
1,695,347	+		AO353_07695	0.68	-1.8
1,695,347	+		AO353_07695	0.68	-1.4
1,695,347	+		AO353_07695	0.68	-3.1
1,695,348	-		AO353_07695	0.68	-2.6
1,695,425	+		AO353_07695	0.78	-1.7
1,695,425	+		AO353_07695	0.78	-2.4
1,695,425	+		AO353_07695	0.78	-1.4
1,695,426	-		AO353_07695	0.78	+0.6
1,695,580	+				-0.2
1,695,580	+				-1.4
1,695,580	+				-3.4
1,695,580	+				-3.5
1,695,580	+				-1.7
1,695,580	+				-3.2
1,695,580	+				-2.2
1,695,581	-				-0.2
1,695,581	-				-1.6
1,695,581	-				-3.3
1,695,588	+				-2.2
1,695,588	+				-0.7
1,695,588	+				-2.7
1,695,588	+				-0.5
1,695,588	+				-3.2
1,695,589	-				-2.4
1,695,589	-				-2.3
1,695,594	+				-3.4
1,695,594	+				-2.8
1,695,595	-				-1.0
1,695,595	-				-2.2
1,695,595	-				-1.5
1,695,595	-				-1.0
1,695,611	+				-1.7
1,695,612	-				+1.9
1,695,612	-				-0.1
1,695,612	-				+2.3
1,695,612	-				-0.5
1,695,691	+				-1.8
1,695,691	+				-1.0
1,695,691	+				-1.6
1,695,692	-				-2.3
1,695,692	-				-2.0
1,695,692	-				-2.9
1,695,692	-				-2.1
1,695,692	-				-2.1
1,695,692	-				-3.0
1,695,692	-				-1.0
1,695,816	-		AO353_07700	0.17	+1.0
1,695,816	-		AO353_07700	0.17	+0.5
1,696,562	+		AO353_07700	0.78	-1.9
1,696,562	+		AO353_07700	0.78	-2.7
1,696,562	+		AO353_07700	0.78	-2.5
1,696,562	+		AO353_07700	0.78	+0.5
1,696,562	+		AO353_07700	0.78	-3.4
1,696,562	+		AO353_07700	0.78	-1.9
1,696,563	-		AO353_07700	0.78	-0.2
1,696,563	-		AO353_07700	0.78	-3.0
1,696,563	-		AO353_07700	0.78	-3.9