Experiment: phosphite 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_43 and Pf6N2E2_44 are separated by 259 nucleotides Pf6N2E2_44 and Pf6N2E2_45 are separated by 177 nucleotides
Pf6N2E2_43 - Histidine permease YuiF, at 81,349 to 82,668
_43
Pf6N2E2_44 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 82,928 to 84,607
_44
Pf6N2E2_45 - Putative protease, at 84,785 to 86,209
_45
Position (kb)
82
83
84
85 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 82.003 kb on + strand, within Pf6N2E2_43 at 82.049 kb on - strand, within Pf6N2E2_43 at 82.619 kb on - strand at 82.619 kb on - strand at 82.619 kb on - strand at 82.619 kb on - strand at 82.619 kb on - strand at 82.666 kb on + strand at 82.667 kb on - strand at 82.667 kb on - strand at 82.667 kb on - strand at 82.753 kb on + strand at 82.753 kb on + strand at 82.753 kb on + strand at 82.754 kb on - strand at 82.754 kb on - strand at 82.754 kb on - strand at 82.754 kb on - strand at 82.754 kb on - strand at 82.828 kb on + strand at 82.829 kb on - strand at 82.829 kb on - strand at 82.829 kb on - strand at 82.829 kb on - strand at 82.829 kb on - strand at 82.829 kb on - strand at 82.834 kb on + strand at 82.861 kb on - strand at 82.861 kb on - strand at 82.887 kb on + strand at 82.887 kb on + strand at 82.888 kb on - strand at 82.888 kb on - strand at 82.888 kb on - strand at 82.905 kb on + strand at 82.906 kb on - strand at 82.912 kb on + strand at 82.912 kb on + strand at 82.912 kb on + strand at 82.913 kb on - strand at 82.948 kb on + strand at 83.035 kb on + strand at 83.035 kb on + strand at 83.036 kb on - strand at 83.099 kb on + strand, within Pf6N2E2_44 at 83.100 kb on - strand, within Pf6N2E2_44 at 83.100 kb on - strand, within Pf6N2E2_44 at 83.136 kb on - strand at 83.158 kb on + strand, within Pf6N2E2_44 at 83.204 kb on + strand, within Pf6N2E2_44 at 83.220 kb on - strand, within Pf6N2E2_44 at 83.321 kb on + strand, within Pf6N2E2_44 at 83.321 kb on + strand, within Pf6N2E2_44 at 83.322 kb on - strand, within Pf6N2E2_44 at 83.366 kb on + strand, within Pf6N2E2_44 at 83.367 kb on - strand, within Pf6N2E2_44 at 83.367 kb on - strand, within Pf6N2E2_44 at 83.375 kb on + strand, within Pf6N2E2_44 at 83.375 kb on + strand, within Pf6N2E2_44 at 83.432 kb on + strand, within Pf6N2E2_44 at 83.432 kb on + strand, within Pf6N2E2_44 at 83.432 kb on + strand, within Pf6N2E2_44 at 83.433 kb on - strand, within Pf6N2E2_44 at 83.529 kb on + strand, within Pf6N2E2_44 at 83.529 kb on + strand, within Pf6N2E2_44 at 83.529 kb on + strand, within Pf6N2E2_44 at 83.530 kb on - strand, within Pf6N2E2_44 at 83.530 kb on - strand, within Pf6N2E2_44 at 84.219 kb on + strand, within Pf6N2E2_44 at 84.219 kb on + strand, within Pf6N2E2_44 at 84.219 kb on + strand, within Pf6N2E2_44 at 84.220 kb on - strand, within Pf6N2E2_44 at 84.220 kb on - strand, within Pf6N2E2_44 at 84.858 kb on + strand at 84.859 kb on - strand at 85.081 kb on - strand, within Pf6N2E2_45 at 85.081 kb on - strand, within Pf6N2E2_45 at 85.081 kb on - strand, within Pf6N2E2_45 at 85.089 kb on + strand, within Pf6N2E2_45 at 85.090 kb on - strand, within Pf6N2E2_45 at 85.239 kb on + strand, within Pf6N2E2_45 at 85.239 kb on + strand, within Pf6N2E2_45 at 85.240 kb on - strand, within Pf6N2E2_45 at 85.344 kb on + strand, within Pf6N2E2_45 at 85.344 kb on + strand, within Pf6N2E2_45 at 85.344 kb on + strand, within Pf6N2E2_45 at 85.344 kb on + strand, within Pf6N2E2_45 at 85.344 kb on + strand, within Pf6N2E2_45 at 85.344 kb on + strand, within Pf6N2E2_45 at 85.344 kb on + strand, within Pf6N2E2_45 at 85.345 kb on - strand, within Pf6N2E2_45 at 85.345 kb on - strand, within Pf6N2E2_45 at 85.345 kb on - strand, within Pf6N2E2_45 at 85.345 kb on - strand, within Pf6N2E2_45 at 85.345 kb on - strand, within Pf6N2E2_45 at 85.345 kb on - strand, within Pf6N2E2_45 at 85.458 kb on + strand, within Pf6N2E2_45 at 85.458 kb on + strand, within Pf6N2E2_45 at 85.458 kb on + strand, within Pf6N2E2_45 at 85.459 kb on - strand, within Pf6N2E2_45 at 85.459 kb on - strand, within Pf6N2E2_45 at 85.459 kb on - strand, within Pf6N2E2_45 at 85.459 kb on - strand, within Pf6N2E2_45 at 85.459 kb on - strand, within Pf6N2E2_45 at 85.483 kb on + strand, within Pf6N2E2_45 at 85.510 kb on - strand, within Pf6N2E2_45 at 85.510 kb on - strand, within Pf6N2E2_45 at 85.562 kb on + strand, within Pf6N2E2_45 at 85.562 kb on + strand, within Pf6N2E2_45 at 85.562 kb on + strand, within Pf6N2E2_45 at 85.593 kb on + strand, within Pf6N2E2_45 at 85.594 kb on - strand, within Pf6N2E2_45
Per-strain Table
Position Strand Gene LocusTag Fraction phosphite 0.25 M remove 82,003 + Pf6N2E2_43 0.50 +0.6 82,049 - Pf6N2E2_43 0.53 -1.0 82,619 - -0.5 82,619 - -2.5 82,619 - -0.4 82,619 - -2.3 82,619 - +0.5 82,666 + +0.1 82,667 - +0.9 82,667 - +1.7 82,667 - +0.2 82,753 + +1.6 82,753 + +2.1 82,753 + +0.2 82,754 - -0.7 82,754 - -0.8 82,754 - +0.9 82,754 - +0.0 82,754 - -0.5 82,828 + +0.7 82,829 - +1.3 82,829 - -0.7 82,829 - +0.6 82,829 - -0.1 82,829 - +0.7 82,829 - -1.3 82,834 + -0.3 82,861 - -2.8 82,861 - +0.8 82,887 + +0.1 82,887 + -0.2 82,888 - +0.6 82,888 - +0.7 82,888 - +0.3 82,905 + +0.3 82,906 - -1.0 82,912 + +0.9 82,912 + -0.9 82,912 + +0.1 82,913 - -0.4 82,948 + -1.7 83,035 + +0.5 83,035 + -0.1 83,036 - -0.1 83,099 + Pf6N2E2_44 0.10 -0.3 83,100 - Pf6N2E2_44 0.10 +0.8 83,100 - Pf6N2E2_44 0.10 +1.1 83,136 - -1.1 83,158 + Pf6N2E2_44 0.14 -0.8 83,204 + Pf6N2E2_44 0.16 +0.8 83,220 - Pf6N2E2_44 0.17 +1.7 83,321 + Pf6N2E2_44 0.23 -0.1 83,321 + Pf6N2E2_44 0.23 -0.5 83,322 - Pf6N2E2_44 0.23 +0.9 83,366 + Pf6N2E2_44 0.26 -0.8 83,367 - Pf6N2E2_44 0.26 +1.2 83,367 - Pf6N2E2_44 0.26 +1.5 83,375 + Pf6N2E2_44 0.27 +0.3 83,375 + Pf6N2E2_44 0.27 -0.6 83,432 + Pf6N2E2_44 0.30 -1.6 83,432 + Pf6N2E2_44 0.30 -0.6 83,432 + Pf6N2E2_44 0.30 +0.5 83,433 - Pf6N2E2_44 0.30 -1.4 83,529 + Pf6N2E2_44 0.36 +0.4 83,529 + Pf6N2E2_44 0.36 -2.2 83,529 + Pf6N2E2_44 0.36 -1.2 83,530 - Pf6N2E2_44 0.36 +1.2 83,530 - Pf6N2E2_44 0.36 -0.6 84,219 + Pf6N2E2_44 0.77 +1.7 84,219 + Pf6N2E2_44 0.77 +2.1 84,219 + Pf6N2E2_44 0.77 +0.3 84,220 - Pf6N2E2_44 0.77 -0.9 84,220 - Pf6N2E2_44 0.77 +0.5 84,858 + -0.4 84,859 - -1.1 85,081 - Pf6N2E2_45 0.21 +0.9 85,081 - Pf6N2E2_45 0.21 +0.3 85,081 - Pf6N2E2_45 0.21 +0.6 85,089 + Pf6N2E2_45 0.21 -0.2 85,090 - Pf6N2E2_45 0.21 -0.5 85,239 + Pf6N2E2_45 0.32 -1.8 85,239 + Pf6N2E2_45 0.32 -0.3 85,240 - Pf6N2E2_45 0.32 +0.4 85,344 + Pf6N2E2_45 0.39 +1.6 85,344 + Pf6N2E2_45 0.39 -1.2 85,344 + Pf6N2E2_45 0.39 +1.7 85,344 + Pf6N2E2_45 0.39 +0.0 85,344 + Pf6N2E2_45 0.39 +0.5 85,344 + Pf6N2E2_45 0.39 +0.1 85,344 + Pf6N2E2_45 0.39 +0.7 85,345 - Pf6N2E2_45 0.39 +0.9 85,345 - Pf6N2E2_45 0.39 -1.5 85,345 - Pf6N2E2_45 0.39 -0.6 85,345 - Pf6N2E2_45 0.39 +1.3 85,345 - Pf6N2E2_45 0.39 -0.3 85,345 - Pf6N2E2_45 0.39 -1.1 85,458 + Pf6N2E2_45 0.47 -0.4 85,458 + Pf6N2E2_45 0.47 +0.6 85,458 + Pf6N2E2_45 0.47 +0.6 85,459 - Pf6N2E2_45 0.47 -0.1 85,459 - Pf6N2E2_45 0.47 +0.6 85,459 - Pf6N2E2_45 0.47 -1.7 85,459 - Pf6N2E2_45 0.47 +1.2 85,459 - Pf6N2E2_45 0.47 -0.3 85,483 + Pf6N2E2_45 0.49 -0.7 85,510 - Pf6N2E2_45 0.51 -0.3 85,510 - Pf6N2E2_45 0.51 +0.1 85,562 + Pf6N2E2_45 0.55 +0.5 85,562 + Pf6N2E2_45 0.55 +0.3 85,562 + Pf6N2E2_45 0.55 -2.7 85,593 + Pf6N2E2_45 0.57 +0.4 85,594 - Pf6N2E2_45 0.57 -1.1
Or see this region's nucleotide sequence