Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25155 and AO353_25160 are separated by 33 nucleotides AO353_25160 and AO353_25165 overlap by 23 nucleotides AO353_25165 and AO353_25170 are separated by 343 nucleotides
AO353_25155: AO353_25155 - pyruvate dehydrogenase, at 5,549,269 to 5,550,288
_25155
AO353_25160: AO353_25160 - ABC transporter substrate-binding protein, at 5,550,322 to 5,551,299
_25160
AO353_25165: AO353_25165 - ATP-NAD kinase, at 5,551,277 to 5,552,377
_25165
AO353_25170: AO353_25170 - Fis family transcriptional regulator, at 5,552,721 to 5,554,613
_25170
Position (kb) 5551
5552
5553 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5550.310 kb on + strand at 5550.311 kb on - strand at 5550.312 kb on + strand at 5550.312 kb on + strand at 5550.313 kb on - strand at 5550.313 kb on - strand at 5550.338 kb on + strand at 5550.339 kb on - strand at 5550.339 kb on - strand at 5550.573 kb on - strand, within AO353_25160 at 5550.576 kb on - strand, within AO353_25160 at 5551.037 kb on + strand, within AO353_25160 at 5551.037 kb on + strand, within AO353_25160 at 5551.038 kb on - strand, within AO353_25160 at 5551.060 kb on + strand, within AO353_25160 at 5551.060 kb on + strand, within AO353_25160 at 5551.060 kb on + strand, within AO353_25160 at 5551.061 kb on - strand, within AO353_25160 at 5551.172 kb on + strand, within AO353_25160 at 5551.172 kb on + strand, within AO353_25160 at 5551.173 kb on - strand, within AO353_25160 at 5551.173 kb on - strand, within AO353_25160 at 5551.303 kb on + strand at 5551.389 kb on + strand, within AO353_25165 at 5551.390 kb on - strand, within AO353_25165 at 5551.390 kb on - strand, within AO353_25165 at 5551.390 kb on - strand, within AO353_25165 at 5551.390 kb on - strand, within AO353_25165 at 5551.522 kb on + strand, within AO353_25165 at 5551.522 kb on + strand, within AO353_25165 at 5551.523 kb on - strand, within AO353_25165 at 5551.853 kb on - strand, within AO353_25165 at 5551.934 kb on + strand, within AO353_25165 at 5551.934 kb on + strand, within AO353_25165 at 5551.935 kb on - strand, within AO353_25165 at 5551.935 kb on - strand, within AO353_25165 at 5551.935 kb on - strand, within AO353_25165 at 5552.350 kb on + strand at 5552.350 kb on + strand at 5552.350 kb on + strand at 5552.350 kb on + strand at 5552.350 kb on + strand at 5552.350 kb on + strand at 5552.351 kb on - strand at 5552.351 kb on - strand at 5552.351 kb on - strand at 5552.354 kb on + strand at 5552.354 kb on + strand at 5552.354 kb on + strand at 5552.355 kb on - strand at 5552.355 kb on - strand at 5552.355 kb on - strand at 5552.436 kb on + strand at 5552.437 kb on - strand at 5552.437 kb on - strand at 5552.473 kb on - strand at 5552.679 kb on + strand at 5552.680 kb on - strand at 5552.695 kb on - strand at 5552.869 kb on + strand at 5552.870 kb on - strand at 5553.081 kb on + strand, within AO353_25170 at 5553.081 kb on + strand, within AO353_25170 at 5553.082 kb on - strand, within AO353_25170 at 5553.082 kb on - strand, within AO353_25170 at 5553.082 kb on - strand, within AO353_25170 at 5553.082 kb on - strand, within AO353_25170 at 5553.116 kb on + strand, within AO353_25170 at 5553.117 kb on - strand, within AO353_25170 at 5553.117 kb on - strand, within AO353_25170 at 5553.117 kb on - strand, within AO353_25170 at 5553.117 kb on - strand, within AO353_25170 at 5553.117 kb on - strand, within AO353_25170 at 5553.117 kb on - strand, within AO353_25170 at 5553.375 kb on + strand, within AO353_25170
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 5,550,310 + -0.8 5,550,311 - +1.1 5,550,312 + +0.0 5,550,312 + -1.3 5,550,313 - -0.4 5,550,313 - -1.1 5,550,338 + +0.6 5,550,339 - +0.4 5,550,339 - -2.2 5,550,573 - AO353_25160 0.26 +0.1 5,550,576 - AO353_25160 0.26 -0.1 5,551,037 + AO353_25160 0.73 +0.8 5,551,037 + AO353_25160 0.73 -0.6 5,551,038 - AO353_25160 0.73 +0.2 5,551,060 + AO353_25160 0.75 -0.0 5,551,060 + AO353_25160 0.75 -0.9 5,551,060 + AO353_25160 0.75 -0.4 5,551,061 - AO353_25160 0.76 +0.8 5,551,172 + AO353_25160 0.87 +0.6 5,551,172 + AO353_25160 0.87 -1.5 5,551,173 - AO353_25160 0.87 -0.4 5,551,173 - AO353_25160 0.87 -0.1 5,551,303 + -0.3 5,551,389 + AO353_25165 0.10 +0.4 5,551,390 - AO353_25165 0.10 +0.6 5,551,390 - AO353_25165 0.10 -0.1 5,551,390 - AO353_25165 0.10 -1.1 5,551,390 - AO353_25165 0.10 +0.7 5,551,522 + AO353_25165 0.22 -0.6 5,551,522 + AO353_25165 0.22 +0.2 5,551,523 - AO353_25165 0.22 +0.5 5,551,853 - AO353_25165 0.52 +3.1 5,551,934 + AO353_25165 0.60 +0.6 5,551,934 + AO353_25165 0.60 +0.7 5,551,935 - AO353_25165 0.60 +1.5 5,551,935 - AO353_25165 0.60 +0.2 5,551,935 - AO353_25165 0.60 +0.7 5,552,350 + -1.2 5,552,350 + -2.5 5,552,350 + -1.6 5,552,350 + -0.8 5,552,350 + -0.4 5,552,350 + +0.3 5,552,351 - -1.2 5,552,351 - -0.5 5,552,351 - +0.2 5,552,354 + +1.2 5,552,354 + -2.4 5,552,354 + +0.4 5,552,355 - +0.5 5,552,355 - -0.9 5,552,355 - +1.5 5,552,436 + -0.9 5,552,437 - +1.2 5,552,437 - -0.6 5,552,473 - -0.6 5,552,679 + -0.5 5,552,680 - -0.7 5,552,695 - +0.1 5,552,869 + +1.9 5,552,870 - -0.2 5,553,081 + AO353_25170 0.19 -0.9 5,553,081 + AO353_25170 0.19 -0.9 5,553,082 - AO353_25170 0.19 +0.8 5,553,082 - AO353_25170 0.19 -0.9 5,553,082 - AO353_25170 0.19 +2.2 5,553,082 - AO353_25170 0.19 +0.3 5,553,116 + AO353_25170 0.21 +1.4 5,553,117 - AO353_25170 0.21 +0.2 5,553,117 - AO353_25170 0.21 -1.6 5,553,117 - AO353_25170 0.21 +0.6 5,553,117 - AO353_25170 0.21 -0.4 5,553,117 - AO353_25170 0.21 +1.7 5,553,117 - AO353_25170 0.21 +0.3 5,553,375 + AO353_25170 0.35 +0.5
Or see this region's nucleotide sequence