Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21660 and AO353_21665 are separated by 196 nucleotides AO353_21665 and AO353_21670 are separated by 119 nucleotides AO353_21670 and AO353_21675 are separated by 58 nucleotides
AO353_21660: AO353_21660 - cobalamin biosynthesis protein CobN, at 4,747,444 to 4,751,217
_21660
AO353_21665: AO353_21665 - magnesium chelatase, at 4,751,414 to 4,752,421
_21665
AO353_21670: AO353_21670 - magnesium chelatase, at 4,752,541 to 4,753,077
_21670
AO353_21675: AO353_21675 - phospholipase, at 4,753,136 to 4,754,779
_21675
Position (kb)
4751
4752
4753 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4750.419 kb on + strand, within AO353_21660 at 4750.540 kb on + strand, within AO353_21660 at 4750.609 kb on + strand, within AO353_21660 at 4750.609 kb on + strand, within AO353_21660 at 4750.609 kb on + strand, within AO353_21660 at 4750.610 kb on - strand, within AO353_21660 at 4750.610 kb on - strand, within AO353_21660 at 4750.753 kb on + strand, within AO353_21660 at 4750.753 kb on + strand, within AO353_21660 at 4750.753 kb on + strand, within AO353_21660 at 4750.753 kb on + strand, within AO353_21660 at 4750.754 kb on - strand, within AO353_21660 at 4750.754 kb on - strand, within AO353_21660 at 4750.754 kb on - strand, within AO353_21660 at 4750.754 kb on - strand, within AO353_21660 at 4750.754 kb on - strand, within AO353_21660 at 4750.754 kb on - strand, within AO353_21660 at 4750.756 kb on + strand, within AO353_21660 at 4750.756 kb on + strand, within AO353_21660 at 4750.756 kb on + strand, within AO353_21660 at 4750.819 kb on + strand, within AO353_21660 at 4750.819 kb on + strand, within AO353_21660 at 4750.977 kb on + strand at 4750.977 kb on + strand at 4750.977 kb on + strand at 4751.027 kb on - strand at 4751.048 kb on - strand at 4751.048 kb on - strand at 4751.088 kb on + strand at 4751.088 kb on + strand at 4751.088 kb on + strand at 4751.089 kb on - strand at 4751.089 kb on - strand at 4751.199 kb on + strand at 4751.200 kb on - strand at 4751.200 kb on - strand at 4751.201 kb on + strand at 4751.201 kb on + strand at 4751.201 kb on + strand at 4751.201 kb on + strand at 4751.201 kb on + strand at 4751.201 kb on + strand at 4751.201 kb on + strand at 4751.201 kb on + strand at 4751.201 kb on + strand at 4751.201 kb on + strand at 4751.202 kb on - strand at 4751.202 kb on - strand at 4751.202 kb on - strand at 4751.202 kb on - strand at 4751.202 kb on - strand at 4751.389 kb on + strand at 4751.389 kb on + strand at 4751.389 kb on + strand at 4751.390 kb on - strand at 4751.390 kb on - strand at 4751.720 kb on + strand, within AO353_21665 at 4751.720 kb on + strand, within AO353_21665 at 4751.720 kb on + strand, within AO353_21665 at 4751.720 kb on + strand, within AO353_21665 at 4751.720 kb on + strand, within AO353_21665 at 4751.720 kb on + strand, within AO353_21665 at 4751.720 kb on + strand, within AO353_21665 at 4751.720 kb on + strand, within AO353_21665 at 4751.720 kb on + strand, within AO353_21665 at 4751.720 kb on + strand, within AO353_21665 at 4751.720 kb on + strand, within AO353_21665 at 4751.720 kb on + strand at 4751.721 kb on - strand, within AO353_21665 at 4751.721 kb on - strand, within AO353_21665 at 4751.721 kb on - strand, within AO353_21665 at 4751.721 kb on - strand, within AO353_21665 at 4751.721 kb on - strand, within AO353_21665 at 4751.766 kb on + strand, within AO353_21665 at 4752.373 kb on - strand at 4752.373 kb on - strand at 4752.420 kb on - strand at 4753.054 kb on + strand at 4753.062 kb on + strand at 4753.063 kb on - strand at 4753.075 kb on + strand at 4753.075 kb on + strand at 4753.075 kb on + strand at 4753.075 kb on + strand at 4753.075 kb on + strand at 4753.076 kb on - strand at 4753.088 kb on + strand at 4753.101 kb on + strand at 4753.101 kb on + strand at 4753.101 kb on + strand at 4753.101 kb on + strand at 4753.101 kb on + strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.184 kb on + strand at 4753.184 kb on + strand at 4753.184 kb on + strand at 4753.184 kb on + strand at 4753.185 kb on - strand at 4753.185 kb on - strand at 4753.185 kb on - strand at 4753.185 kb on - strand at 4753.185 kb on - strand at 4753.207 kb on - strand at 4753.207 kb on - strand at 4753.344 kb on - strand, within AO353_21675 at 4753.344 kb on - strand, within AO353_21675 at 4753.344 kb on - strand, within AO353_21675
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 4,750,419 + AO353_21660 0.79 -0.5 4,750,540 + AO353_21660 0.82 +0.2 4,750,609 + AO353_21660 0.84 -0.4 4,750,609 + AO353_21660 0.84 -0.6 4,750,609 + AO353_21660 0.84 -0.8 4,750,610 - AO353_21660 0.84 -0.4 4,750,610 - AO353_21660 0.84 -0.0 4,750,753 + AO353_21660 0.88 -0.1 4,750,753 + AO353_21660 0.88 -1.3 4,750,753 + AO353_21660 0.88 -1.7 4,750,753 + AO353_21660 0.88 +0.3 4,750,754 - AO353_21660 0.88 +0.3 4,750,754 - AO353_21660 0.88 -1.0 4,750,754 - AO353_21660 0.88 -0.6 4,750,754 - AO353_21660 0.88 -0.7 4,750,754 - AO353_21660 0.88 -0.7 4,750,754 - AO353_21660 0.88 +0.3 4,750,756 + AO353_21660 0.88 -1.8 4,750,756 + AO353_21660 0.88 -0.1 4,750,756 + AO353_21660 0.88 -0.8 4,750,819 + AO353_21660 0.89 +0.8 4,750,819 + AO353_21660 0.89 -1.5 4,750,977 + -0.9 4,750,977 + +0.0 4,750,977 + +0.2 4,751,027 - -1.2 4,751,048 - -3.4 4,751,048 - -1.0 4,751,088 + -0.2 4,751,088 + -1.8 4,751,088 + -0.8 4,751,089 - -0.2 4,751,089 - -1.2 4,751,199 + +0.1 4,751,200 - -0.8 4,751,200 - -0.4 4,751,201 + -0.7 4,751,201 + -1.2 4,751,201 + +0.1 4,751,201 + -1.5 4,751,201 + -2.0 4,751,201 + -0.6 4,751,201 + +0.2 4,751,201 + -1.0 4,751,201 + +0.1 4,751,201 + -2.6 4,751,202 - -2.8 4,751,202 - +0.1 4,751,202 - +0.2 4,751,202 - -0.1 4,751,202 - -1.5 4,751,389 + +0.0 4,751,389 + +0.4 4,751,389 + +0.3 4,751,390 - -1.1 4,751,390 - -1.2 4,751,720 + AO353_21665 0.30 -0.8 4,751,720 + AO353_21665 0.30 -2.1 4,751,720 + AO353_21665 0.30 -2.1 4,751,720 + AO353_21665 0.30 +0.8 4,751,720 + AO353_21665 0.30 -1.1 4,751,720 + AO353_21665 0.30 -3.1 4,751,720 + AO353_21665 0.30 -2.6 4,751,720 + AO353_21665 0.30 -1.4 4,751,720 + AO353_21665 0.30 +0.2 4,751,720 + AO353_21665 0.30 -2.1 4,751,720 + AO353_21665 0.30 -0.3 4,751,720 + +0.5 4,751,721 - AO353_21665 0.30 -0.9 4,751,721 - AO353_21665 0.30 +0.5 4,751,721 - AO353_21665 0.30 -0.3 4,751,721 - AO353_21665 0.30 -0.9 4,751,721 - AO353_21665 0.30 +0.5 4,751,766 + AO353_21665 0.35 -0.5 4,752,373 - +0.1 4,752,373 - -2.4 4,752,420 - +0.0 4,753,054 + -0.4 4,753,062 + -2.6 4,753,063 - -0.7 4,753,075 + -0.1 4,753,075 + +1.5 4,753,075 + -1.2 4,753,075 + -1.2 4,753,075 + -1.2 4,753,076 - +0.4 4,753,088 + -0.1 4,753,101 + -0.8 4,753,101 + -0.5 4,753,101 + +0.3 4,753,101 + +0.2 4,753,101 + -0.0 4,753,102 - +0.3 4,753,102 - +2.7 4,753,102 - +1.0 4,753,102 - +0.3 4,753,102 - -0.7 4,753,102 - +0.5 4,753,102 - -0.3 4,753,102 - +0.8 4,753,102 - -1.9 4,753,102 - +0.3 4,753,102 - -0.1 4,753,102 - -0.7 4,753,184 + -2.1 4,753,184 + -1.3 4,753,184 + -0.8 4,753,184 + -1.2 4,753,185 - -0.3 4,753,185 - +0.5 4,753,185 - -0.5 4,753,185 - -0.1 4,753,185 - +0.6 4,753,207 - -0.3 4,753,207 - -1.3 4,753,344 - AO353_21675 0.13 -0.5 4,753,344 - AO353_21675 0.13 -0.3 4,753,344 - AO353_21675 0.13 -2.2
Or see this region's nucleotide sequence