Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21465

Experiment: L-Citrulline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_21460 and AO353_21465 overlap by 4 nucleotidesAO353_21465 and AO353_21470 overlap by 1 nucleotides AO353_21460: AO353_21460 - cation:proton antiporter, at 4,693,823 to 4,695,508 _21460 AO353_21465: AO353_21465 - cation:proton antiporter, at 4,695,505 to 4,695,849 _21465 AO353_21470: AO353_21470 - cation:proton antiporter, at 4,695,849 to 4,698,767 _21470 Position (kb) 4695 4696Strain fitness (log2 ratio) -2 -1 0 1at 4694.626 kb on + strand, within AO353_21460at 4694.626 kb on + strand, within AO353_21460at 4694.626 kb on + strand, within AO353_21460at 4694.626 kb on + strand, within AO353_21460at 4694.627 kb on - strand, within AO353_21460at 4694.627 kb on - strand, within AO353_21460at 4694.627 kb on - strand, within AO353_21460at 4694.627 kb on - strand, within AO353_21460at 4694.627 kb on - strand, within AO353_21460at 4694.647 kb on - strand, within AO353_21460at 4694.647 kb on - strand, within AO353_21460at 4694.647 kb on - strand, within AO353_21460at 4694.670 kb on + strand, within AO353_21460at 4694.670 kb on + strand, within AO353_21460at 4694.671 kb on - strand, within AO353_21460at 4694.727 kb on + strand, within AO353_21460at 4694.727 kb on + strand, within AO353_21460at 4694.728 kb on - strand, within AO353_21460at 4694.728 kb on - strand, within AO353_21460at 4694.728 kb on - strand, within AO353_21460at 4694.787 kb on + strand, within AO353_21460at 4694.787 kb on + strand, within AO353_21460at 4694.788 kb on - strand, within AO353_21460at 4694.949 kb on + strand, within AO353_21460at 4694.949 kb on + strand, within AO353_21460at 4694.950 kb on - strand, within AO353_21460at 4694.950 kb on - strand, within AO353_21460at 4694.950 kb on - strand, within AO353_21460at 4694.950 kb on - strand, within AO353_21460at 4694.950 kb on - strand, within AO353_21460at 4694.950 kb on - strand, within AO353_21460at 4694.950 kb on - strand, within AO353_21460at 4694.950 kb on - strand, within AO353_21460at 4694.950 kb on - strand, within AO353_21460at 4695.006 kb on + strand, within AO353_21460at 4695.006 kb on + strand, within AO353_21460at 4695.006 kb on + strand, within AO353_21460at 4695.006 kb on + strand, within AO353_21460at 4695.006 kb on + strand, within AO353_21460at 4695.006 kb on + strand, within AO353_21460at 4695.007 kb on - strand, within AO353_21460at 4695.007 kb on - strand, within AO353_21460at 4695.007 kb on - strand, within AO353_21460at 4695.007 kb on - strand, within AO353_21460at 4695.007 kb on - strand, within AO353_21460at 4695.060 kb on + strand, within AO353_21460at 4695.061 kb on - strand, within AO353_21460at 4695.129 kb on + strand, within AO353_21460at 4695.362 kb on + strandat 4695.475 kb on + strandat 4695.475 kb on + strandat 4695.475 kb on + strandat 4695.476 kb on - strandat 4695.476 kb on - strandat 4695.476 kb on - strandat 4695.476 kb on - strandat 4695.619 kb on + strand, within AO353_21465at 4695.619 kb on + strand, within AO353_21465at 4695.647 kb on + strand, within AO353_21465at 4695.647 kb on + strand, within AO353_21465at 4695.647 kb on + strand, within AO353_21465at 4695.879 kb on - strandat 4695.879 kb on - strandat 4695.951 kb on + strandat 4695.951 kb on + strandat 4695.952 kb on - strandat 4695.964 kb on + strandat 4695.964 kb on + strandat 4695.964 kb on + strandat 4695.964 kb on + strandat 4695.965 kb on - strandat 4695.965 kb on - strandat 4695.965 kb on - strandat 4695.998 kb on + strandat 4695.999 kb on - strandat 4696.174 kb on + strand, within AO353_21470at 4696.174 kb on + strand, within AO353_21470at 4696.174 kb on + strand, within AO353_21470at 4696.174 kb on + strand, within AO353_21470at 4696.174 kb on + strand, within AO353_21470at 4696.174 kb on + strand, within AO353_21470at 4696.174 kb on + strand, within AO353_21470at 4696.174 kb on + strand, within AO353_21470at 4696.174 kb on + strand, within AO353_21470at 4696.174 kb on + strand, within AO353_21470at 4696.174 kb on + strand, within AO353_21470at 4696.174 kb on + strand, within AO353_21470at 4696.174 kb on + strand, within AO353_21470at 4696.174 kb on + strand, within AO353_21470at 4696.175 kb on - strand, within AO353_21470at 4696.175 kb on - strand, within AO353_21470at 4696.175 kb on - strand, within AO353_21470at 4696.175 kb on - strand, within AO353_21470at 4696.175 kb on - strand, within AO353_21470at 4696.175 kb on - strand, within AO353_21470at 4696.175 kb on - strand, within AO353_21470at 4696.255 kb on + strand, within AO353_21470at 4696.255 kb on + strand, within AO353_21470at 4696.255 kb on + strand, within AO353_21470at 4696.255 kb on + strand, within AO353_21470at 4696.256 kb on - strand, within AO353_21470at 4696.256 kb on - strand, within AO353_21470at 4696.284 kb on + strand, within AO353_21470at 4696.401 kb on + strand, within AO353_21470at 4696.570 kb on + strand, within AO353_21470at 4696.570 kb on + strand, within AO353_21470at 4696.570 kb on + strand, within AO353_21470at 4696.570 kb on + strand, within AO353_21470at 4696.570 kb on + strandat 4696.571 kb on - strand, within AO353_21470at 4696.571 kb on - strand, within AO353_21470at 4696.571 kb on - strand, within AO353_21470at 4696.571 kb on - strand, within AO353_21470at 4696.584 kb on - strand, within AO353_21470at 4696.584 kb on - strand, within AO353_21470at 4696.584 kb on - strand, within AO353_21470

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Citrulline (N)
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4,694,626 + AO353_21460 0.48 +0.0
4,694,626 + AO353_21460 0.48 +0.9
4,694,626 + AO353_21460 0.48 +0.2
4,694,626 + AO353_21460 0.48 +0.1
4,694,627 - AO353_21460 0.48 -1.5
4,694,627 - AO353_21460 0.48 +0.8
4,694,627 - AO353_21460 0.48 -0.5
4,694,627 - AO353_21460 0.48 -0.2
4,694,627 - AO353_21460 0.48 +0.8
4,694,647 - AO353_21460 0.49 +0.1
4,694,647 - AO353_21460 0.49 +0.6
4,694,647 - AO353_21460 0.49 -0.6
4,694,670 + AO353_21460 0.50 +0.5
4,694,670 + AO353_21460 0.50 -1.7
4,694,671 - AO353_21460 0.50 -0.6
4,694,727 + AO353_21460 0.54 -1.2
4,694,727 + AO353_21460 0.54 -0.5
4,694,728 - AO353_21460 0.54 -2.4
4,694,728 - AO353_21460 0.54 +0.4
4,694,728 - AO353_21460 0.54 -1.1
4,694,787 + AO353_21460 0.57 -0.3
4,694,787 + AO353_21460 0.57 -0.4
4,694,788 - AO353_21460 0.57 -1.7
4,694,949 + AO353_21460 0.67 -2.4
4,694,949 + AO353_21460 0.67 -0.2
4,694,950 - AO353_21460 0.67 -0.8
4,694,950 - AO353_21460 0.67 -2.5
4,694,950 - AO353_21460 0.67 +0.3
4,694,950 - AO353_21460 0.67 -0.2
4,694,950 - AO353_21460 0.67 +0.6
4,694,950 - AO353_21460 0.67 -1.0
4,694,950 - AO353_21460 0.67 -0.8
4,694,950 - AO353_21460 0.67 +0.8
4,694,950 - AO353_21460 0.67 -0.0
4,695,006 + AO353_21460 0.70 +0.3
4,695,006 + AO353_21460 0.70 -0.1
4,695,006 + AO353_21460 0.70 -1.1
4,695,006 + AO353_21460 0.70 -0.6
4,695,006 + AO353_21460 0.70 -1.0
4,695,006 + AO353_21460 0.70 +0.1
4,695,007 - AO353_21460 0.70 -1.7
4,695,007 - AO353_21460 0.70 +0.2
4,695,007 - AO353_21460 0.70 -0.6
4,695,007 - AO353_21460 0.70 -1.1
4,695,007 - AO353_21460 0.70 -2.2
4,695,060 + AO353_21460 0.73 -1.9
4,695,061 - AO353_21460 0.73 +0.2
4,695,129 + AO353_21460 0.77 +0.3
4,695,362 + +0.1
4,695,475 + -0.1
4,695,475 + +0.7
4,695,475 + +0.1
4,695,476 - +0.3
4,695,476 - +0.1
4,695,476 - -0.8
4,695,476 - +0.0
4,695,619 + AO353_21465 0.33 -0.4
4,695,619 + AO353_21465 0.33 -1.3
4,695,647 + AO353_21465 0.41 -0.4
4,695,647 + AO353_21465 0.41 -1.4
4,695,647 + AO353_21465 0.41 -0.3
4,695,879 - +0.6
4,695,879 - +0.3
4,695,951 + -0.1
4,695,951 + -0.3
4,695,952 - +0.1
4,695,964 + -0.9
4,695,964 + +0.3
4,695,964 + +0.2
4,695,964 + -0.8
4,695,965 - +0.5
4,695,965 - -1.4
4,695,965 - -1.8
4,695,998 + -1.2
4,695,999 - -0.3
4,696,174 + AO353_21470 0.11 -0.5
4,696,174 + AO353_21470 0.11 -0.6
4,696,174 + AO353_21470 0.11 -1.1
4,696,174 + AO353_21470 0.11 +1.1
4,696,174 + AO353_21470 0.11 +1.0
4,696,174 + AO353_21470 0.11 -0.8
4,696,174 + AO353_21470 0.11 -0.1
4,696,174 + AO353_21470 0.11 -1.4
4,696,174 + AO353_21470 0.11 -0.0
4,696,174 + AO353_21470 0.11 -0.9
4,696,174 + AO353_21470 0.11 -1.7
4,696,174 + AO353_21470 0.11 +1.7
4,696,174 + AO353_21470 0.11 +0.8
4,696,174 + AO353_21470 0.11 -1.8
4,696,175 - AO353_21470 0.11 +0.8
4,696,175 - AO353_21470 0.11 +0.5
4,696,175 - AO353_21470 0.11 -0.1
4,696,175 - AO353_21470 0.11 -0.1
4,696,175 - AO353_21470 0.11 -0.7
4,696,175 - AO353_21470 0.11 -0.8
4,696,175 - AO353_21470 0.11 -1.3
4,696,255 + AO353_21470 0.14 -0.5
4,696,255 + AO353_21470 0.14 -0.5
4,696,255 + AO353_21470 0.14 -0.6
4,696,255 + AO353_21470 0.14 -0.4
4,696,256 - AO353_21470 0.14 -1.1
4,696,256 - AO353_21470 0.14 +0.5
4,696,284 + AO353_21470 0.15 -0.5
4,696,401 + AO353_21470 0.19 +0.5
4,696,570 + AO353_21470 0.25 -1.6
4,696,570 + AO353_21470 0.25 -0.1
4,696,570 + AO353_21470 0.25 -0.2
4,696,570 + AO353_21470 0.25 +0.2
4,696,570 + +0.5
4,696,571 - AO353_21470 0.25 +1.1
4,696,571 - AO353_21470 0.25 +1.5
4,696,571 - AO353_21470 0.25 -0.3
4,696,571 - AO353_21470 0.25 +0.9
4,696,584 - AO353_21470 0.25 -0.5
4,696,584 - AO353_21470 0.25 -0.5
4,696,584 - AO353_21470 0.25 +0.4

Or see this region's nucleotide sequence