Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_03740

Experiment: L-Citrulline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_03735 and AO353_03740 overlap by 4 nucleotidesAO353_03740 and AO353_03745 overlap by 4 nucleotides AO353_03735: AO353_03735 - hypothetical protein, at 797,987 to 799,525 _03735 AO353_03740: AO353_03740 - hypothetical protein, at 799,522 to 800,679 _03740 AO353_03745: AO353_03745 - AAA family ATPase, at 800,676 to 801,677 _03745 Position (kb) 799 800 801Strain fitness (log2 ratio) -2 -1 0 1 2 3at 798.605 kb on + strand, within AO353_03735at 798.606 kb on - strand, within AO353_03735at 798.638 kb on + strand, within AO353_03735at 798.638 kb on + strand, within AO353_03735at 798.638 kb on + strand, within AO353_03735at 798.638 kb on + strand, within AO353_03735at 798.638 kb on + strand, within AO353_03735at 798.638 kb on + strand, within AO353_03735at 798.638 kb on + strand, within AO353_03735at 798.639 kb on - strand, within AO353_03735at 798.639 kb on - strand, within AO353_03735at 798.639 kb on - strand, within AO353_03735at 798.639 kb on - strand, within AO353_03735at 798.639 kb on - strand, within AO353_03735at 798.639 kb on - strand, within AO353_03735at 798.639 kb on - strand, within AO353_03735at 798.639 kb on - strand, within AO353_03735at 798.639 kb on - strand, within AO353_03735at 798.639 kb on - strand, within AO353_03735at 798.662 kb on + strand, within AO353_03735at 798.663 kb on - strand, within AO353_03735at 798.663 kb on - strand, within AO353_03735at 798.663 kb on - strand, within AO353_03735at 798.768 kb on + strand, within AO353_03735at 798.769 kb on - strand, within AO353_03735at 798.769 kb on - strand, within AO353_03735at 798.888 kb on + strand, within AO353_03735at 798.889 kb on - strand, within AO353_03735at 798.889 kb on - strand, within AO353_03735at 799.116 kb on + strand, within AO353_03735at 799.182 kb on + strand, within AO353_03735at 799.182 kb on + strand, within AO353_03735at 799.183 kb on - strand, within AO353_03735at 799.183 kb on - strand, within AO353_03735at 799.183 kb on - strand, within AO353_03735at 799.183 kb on - strandat 799.283 kb on + strand, within AO353_03735at 799.284 kb on - strand, within AO353_03735at 799.377 kb on + strandat 799.377 kb on + strandat 799.377 kb on + strandat 799.377 kb on + strandat 799.377 kb on + strandat 799.378 kb on - strandat 799.378 kb on - strandat 799.378 kb on - strandat 799.378 kb on - strandat 799.396 kb on + strandat 799.396 kb on + strandat 799.396 kb on + strandat 799.396 kb on + strandat 799.396 kb on + strandat 799.397 kb on - strandat 799.397 kb on - strandat 799.397 kb on - strandat 799.397 kb on - strandat 799.439 kb on + strandat 799.440 kb on - strandat 799.440 kb on - strandat 799.582 kb on + strandat 799.582 kb on + strandat 799.582 kb on + strandat 799.583 kb on - strandat 799.583 kb on - strandat 799.583 kb on - strandat 799.589 kb on - strandat 799.657 kb on + strand, within AO353_03740at 799.658 kb on - strand, within AO353_03740at 799.733 kb on - strand, within AO353_03740at 799.733 kb on - strand, within AO353_03740at 799.760 kb on + strand, within AO353_03740at 799.761 kb on - strand, within AO353_03740at 799.761 kb on - strand, within AO353_03740at 799.994 kb on - strand, within AO353_03740at 799.994 kb on - strand, within AO353_03740at 799.994 kb on - strand, within AO353_03740at 800.020 kb on + strand, within AO353_03740at 800.021 kb on - strand, within AO353_03740at 800.209 kb on + strand, within AO353_03740at 800.210 kb on - strand, within AO353_03740at 800.210 kb on - strand, within AO353_03740at 800.210 kb on - strand, within AO353_03740at 800.210 kb on - strand, within AO353_03740at 800.210 kb on - strand, within AO353_03740at 800.215 kb on + strand, within AO353_03740at 800.216 kb on - strand, within AO353_03740at 800.242 kb on + strand, within AO353_03740at 800.242 kb on + strand, within AO353_03740at 800.348 kb on + strand, within AO353_03740at 800.348 kb on + strand, within AO353_03740at 800.349 kb on - strand, within AO353_03740at 800.349 kb on - strand, within AO353_03740at 800.676 kb on - strandat 800.676 kb on - strandat 800.974 kb on - strand, within AO353_03745at 800.974 kb on - strand, within AO353_03745at 800.974 kb on - strand, within AO353_03745at 800.974 kb on - strand, within AO353_03745at 800.974 kb on - strand, within AO353_03745at 800.974 kb on - strand, within AO353_03745at 801.185 kb on + strand, within AO353_03745at 801.185 kb on + strand, within AO353_03745at 801.185 kb on + strand, within AO353_03745at 801.185 kb on + strand, within AO353_03745at 801.185 kb on + strand, within AO353_03745at 801.185 kb on + strand, within AO353_03745at 801.185 kb on + strand, within AO353_03745at 801.185 kb on + strand, within AO353_03745at 801.185 kb on + strand, within AO353_03745at 801.186 kb on - strand, within AO353_03745at 801.186 kb on - strand, within AO353_03745at 801.186 kb on - strand, within AO353_03745at 801.186 kb on - strand, within AO353_03745at 801.186 kb on - strand, within AO353_03745at 801.186 kb on - strand, within AO353_03745at 801.186 kb on - strand, within AO353_03745at 801.186 kb on - strand, within AO353_03745at 801.186 kb on - strand, within AO353_03745at 801.189 kb on + strand, within AO353_03745at 801.189 kb on + strand, within AO353_03745at 801.190 kb on - strand, within AO353_03745at 801.221 kb on + strand, within AO353_03745at 801.222 kb on - strand, within AO353_03745at 801.222 kb on - strand, within AO353_03745at 801.222 kb on - strand, within AO353_03745at 801.316 kb on + strand, within AO353_03745at 801.316 kb on + strand, within AO353_03745at 801.316 kb on + strand, within AO353_03745at 801.317 kb on - strand, within AO353_03745at 801.317 kb on - strand, within AO353_03745at 801.317 kb on - strand, within AO353_03745at 801.317 kb on - strand, within AO353_03745at 801.317 kb on - strand, within AO353_03745at 801.317 kb on - strand, within AO353_03745at 801.352 kb on + strand, within AO353_03745at 801.352 kb on + strand, within AO353_03745at 801.353 kb on - strand, within AO353_03745at 801.408 kb on + strand, within AO353_03745at 801.408 kb on + strand, within AO353_03745at 801.409 kb on - strand, within AO353_03745at 801.409 kb on - strand, within AO353_03745at 801.409 kb on - strand, within AO353_03745at 801.409 kb on - strand, within AO353_03745at 801.409 kb on - strand, within AO353_03745at 801.574 kb on + strand, within AO353_03745at 801.574 kb on + strand, within AO353_03745at 801.673 kb on + strandat 801.673 kb on + strandat 801.674 kb on - strandat 801.674 kb on - strandat 801.674 kb on - strandat 801.674 kb on - strandat 801.674 kb on - strandat 801.674 kb on - strandat 801.679 kb on + strandat 801.679 kb on + strandat 801.679 kb on + strandat 801.679 kb on + strandat 801.679 kb on + strandat 801.679 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Citrulline (N)
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798,605 + AO353_03735 0.40 -2.6
798,606 - AO353_03735 0.40 +1.5
798,638 + AO353_03735 0.42 +0.4
798,638 + AO353_03735 0.42 +0.2
798,638 + AO353_03735 0.42 -0.4
798,638 + AO353_03735 0.42 -0.9
798,638 + AO353_03735 0.42 -0.3
798,638 + AO353_03735 0.42 +0.8
798,638 + AO353_03735 0.42 -0.2
798,639 - AO353_03735 0.42 -0.2
798,639 - AO353_03735 0.42 +0.9
798,639 - AO353_03735 0.42 -0.1
798,639 - AO353_03735 0.42 -0.3
798,639 - AO353_03735 0.42 +1.4
798,639 - AO353_03735 0.42 +0.7
798,639 - AO353_03735 0.42 -0.2
798,639 - AO353_03735 0.42 -0.3
798,639 - AO353_03735 0.42 +2.0
798,639 - AO353_03735 0.42 -1.0
798,662 + AO353_03735 0.44 -1.6
798,663 - AO353_03735 0.44 +0.9
798,663 - AO353_03735 0.44 -0.4
798,663 - AO353_03735 0.44 +0.0
798,768 + AO353_03735 0.51 -1.0
798,769 - AO353_03735 0.51 -0.4
798,769 - AO353_03735 0.51 -0.0
798,888 + AO353_03735 0.59 +0.1
798,889 - AO353_03735 0.59 -0.0
798,889 - AO353_03735 0.59 -0.0
799,116 + AO353_03735 0.73 -0.5
799,182 + AO353_03735 0.78 +1.1
799,182 + AO353_03735 0.78 -0.7
799,183 - AO353_03735 0.78 +0.1
799,183 - AO353_03735 0.78 +0.2
799,183 - AO353_03735 0.78 +0.9
799,183 - +2.4
799,283 + AO353_03735 0.84 -1.7
799,284 - AO353_03735 0.84 -0.6
799,377 + -0.4
799,377 + +0.4
799,377 + +0.1
799,377 + +0.3
799,377 + +0.1
799,378 - -0.2
799,378 - +0.7
799,378 - +0.6
799,378 - +0.1
799,396 + -0.9
799,396 + -0.5
799,396 + -0.5
799,396 + -0.2
799,396 + +0.7
799,397 - -0.3
799,397 - +1.1
799,397 - +0.1
799,397 - +0.3
799,439 + -1.0
799,440 - +1.3
799,440 - +0.1
799,582 + -0.2
799,582 + -0.0
799,582 + -0.2
799,583 - +0.2
799,583 - -0.5
799,583 - +0.1
799,589 - -0.4
799,657 + AO353_03740 0.12 +1.2
799,658 - AO353_03740 0.12 -0.1
799,733 - AO353_03740 0.18 +0.5
799,733 - AO353_03740 0.18 +0.8
799,760 + AO353_03740 0.21 -0.5
799,761 - AO353_03740 0.21 +0.5
799,761 - AO353_03740 0.21 +0.6
799,994 - AO353_03740 0.41 +1.0
799,994 - AO353_03740 0.41 +0.2
799,994 - AO353_03740 0.41 -0.0
800,020 + AO353_03740 0.43 +1.8
800,021 - AO353_03740 0.43 +1.1
800,209 + AO353_03740 0.59 +2.1
800,210 - AO353_03740 0.59 -1.3
800,210 - AO353_03740 0.59 -0.7
800,210 - AO353_03740 0.59 +1.4
800,210 - AO353_03740 0.59 -0.1
800,210 - AO353_03740 0.59 -0.7
800,215 + AO353_03740 0.60 +1.0
800,216 - AO353_03740 0.60 -2.0
800,242 + AO353_03740 0.62 +0.3
800,242 + AO353_03740 0.62 -0.3
800,348 + AO353_03740 0.71 +0.8
800,348 + AO353_03740 0.71 +0.2
800,349 - AO353_03740 0.71 +0.6
800,349 - AO353_03740 0.71 -0.3
800,676 - -0.6
800,676 - +0.1
800,974 - AO353_03745 0.30 +1.3
800,974 - AO353_03745 0.30 -0.1
800,974 - AO353_03745 0.30 -0.8
800,974 - AO353_03745 0.30 -0.2
800,974 - AO353_03745 0.30 -0.7
800,974 - AO353_03745 0.30 +0.8
801,185 + AO353_03745 0.51 +0.6
801,185 + AO353_03745 0.51 +0.4
801,185 + AO353_03745 0.51 +0.5
801,185 + AO353_03745 0.51 +0.2
801,185 + AO353_03745 0.51 +0.1
801,185 + AO353_03745 0.51 -0.0
801,185 + AO353_03745 0.51 +0.7
801,185 + AO353_03745 0.51 -2.0
801,185 + AO353_03745 0.51 +1.7
801,186 - AO353_03745 0.51 +1.0
801,186 - AO353_03745 0.51 +0.7
801,186 - AO353_03745 0.51 +0.3
801,186 - AO353_03745 0.51 +1.7
801,186 - AO353_03745 0.51 -0.0
801,186 - AO353_03745 0.51 -0.5
801,186 - AO353_03745 0.51 -0.3
801,186 - AO353_03745 0.51 -1.7
801,186 - AO353_03745 0.51 -0.6
801,189 + AO353_03745 0.51 +1.0
801,189 + AO353_03745 0.51 +0.4
801,190 - AO353_03745 0.51 -1.7
801,221 + AO353_03745 0.54 -0.7
801,222 - AO353_03745 0.54 +0.6
801,222 - AO353_03745 0.54 -0.5
801,222 - AO353_03745 0.54 +0.4
801,316 + AO353_03745 0.64 +0.3
801,316 + AO353_03745 0.64 +0.4
801,316 + AO353_03745 0.64 -0.4
801,317 - AO353_03745 0.64 +2.1
801,317 - AO353_03745 0.64 +3.2
801,317 - AO353_03745 0.64 -0.6
801,317 - AO353_03745 0.64 -0.9
801,317 - AO353_03745 0.64 -1.5
801,317 - AO353_03745 0.64 +0.8
801,352 + AO353_03745 0.67 -0.6
801,352 + AO353_03745 0.67 +0.7
801,353 - AO353_03745 0.68 +0.7
801,408 + AO353_03745 0.73 -2.6
801,408 + AO353_03745 0.73 -0.4
801,409 - AO353_03745 0.73 +0.1
801,409 - AO353_03745 0.73 +0.1
801,409 - AO353_03745 0.73 -0.5
801,409 - AO353_03745 0.73 -0.2
801,409 - AO353_03745 0.73 -1.2
801,574 + AO353_03745 0.90 -0.0
801,574 + AO353_03745 0.90 +1.5
801,673 + -0.6
801,673 + +0.0
801,674 - +0.0
801,674 - +0.4
801,674 - -0.2
801,674 - +0.4
801,674 - -0.0
801,674 - -1.5
801,679 + -1.4
801,679 + +0.7
801,679 + +0.8
801,679 + -0.5
801,679 + +0.1
801,679 + +0.4

Or see this region's nucleotide sequence