Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02605 and AO353_02610 overlap by 4 nucleotides AO353_02610 and AO353_02615 are separated by 12 nucleotides AO353_02615 and AO353_02620 overlap by 4 nucleotides AO353_02620 and AO353_02625 overlap by 8 nucleotides
AO353_02605: AO353_02605 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 555,778 to 556,833
_02605
AO353_02610: AO353_02610 - adenosylcobinamide kinase, at 556,830 to 557,351
_02610
AO353_02615: AO353_02615 - cobyric acid synthase, at 557,364 to 558,815
_02615
AO353_02620: AO353_02620 - threonine-phosphate decarboxylase, at 558,812 to 559,804
_02620
AO353_02625: AO353_02625 - cobalamin biosynthesis protein CobD, at 559,797 to 560,705
_02625
Position (kb) 557
558
559 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 556.378 kb on + strand, within AO353_02605 at 556.379 kb on - strand, within AO353_02605 at 556.379 kb on - strand, within AO353_02605 at 556.833 kb on + strand at 556.833 kb on + strand at 556.833 kb on + strand at 556.834 kb on - strand at 556.841 kb on + strand at 556.841 kb on + strand at 556.841 kb on + strand at 556.841 kb on + strand at 556.842 kb on - strand at 556.842 kb on - strand at 556.842 kb on - strand at 556.936 kb on + strand, within AO353_02610 at 556.937 kb on - strand, within AO353_02610 at 556.937 kb on - strand, within AO353_02610 at 556.937 kb on - strand, within AO353_02610 at 556.937 kb on - strand, within AO353_02610 at 557.115 kb on + strand, within AO353_02610 at 557.116 kb on - strand, within AO353_02610 at 557.116 kb on - strand, within AO353_02610 at 557.263 kb on + strand, within AO353_02610 at 557.263 kb on + strand, within AO353_02610 at 557.263 kb on + strand, within AO353_02610 at 557.263 kb on + strand, within AO353_02610 at 557.263 kb on + strand, within AO353_02610 at 557.263 kb on + strand, within AO353_02610 at 557.263 kb on + strand, within AO353_02610 at 557.263 kb on + strand, within AO353_02610 at 557.263 kb on + strand, within AO353_02610 at 557.263 kb on + strand, within AO353_02610 at 557.263 kb on + strand, within AO353_02610 at 557.263 kb on + strand, within AO353_02610 at 557.263 kb on + strand, within AO353_02610 at 557.264 kb on - strand, within AO353_02610 at 557.264 kb on - strand, within AO353_02610 at 557.264 kb on - strand, within AO353_02610 at 557.264 kb on - strand, within AO353_02610 at 557.264 kb on - strand, within AO353_02610 at 557.264 kb on - strand, within AO353_02610 at 557.264 kb on - strand, within AO353_02610 at 557.264 kb on - strand, within AO353_02610 at 557.316 kb on - strand at 557.389 kb on + strand at 557.389 kb on + strand at 557.389 kb on + strand at 557.472 kb on + strand at 557.472 kb on + strand at 557.473 kb on - strand at 557.473 kb on - strand at 557.543 kb on - strand, within AO353_02615 at 557.543 kb on - strand, within AO353_02615 at 557.543 kb on - strand, within AO353_02615 at 557.657 kb on - strand, within AO353_02615 at 557.759 kb on + strand, within AO353_02615 at 557.759 kb on + strand, within AO353_02615 at 557.832 kb on + strand, within AO353_02615 at 557.832 kb on + strand, within AO353_02615 at 557.832 kb on + strand, within AO353_02615 at 557.832 kb on + strand, within AO353_02615 at 557.832 kb on + strand, within AO353_02615 at 557.832 kb on + strand, within AO353_02615 at 557.832 kb on + strand, within AO353_02615 at 557.833 kb on - strand, within AO353_02615 at 557.833 kb on - strand, within AO353_02615 at 557.833 kb on - strand, within AO353_02615 at 557.833 kb on - strand, within AO353_02615 at 557.833 kb on - strand, within AO353_02615 at 557.833 kb on - strand, within AO353_02615 at 557.833 kb on - strand, within AO353_02615 at 557.833 kb on - strand, within AO353_02615 at 557.833 kb on - strand, within AO353_02615 at 557.871 kb on - strand, within AO353_02615 at 557.902 kb on + strand, within AO353_02615 at 557.902 kb on + strand, within AO353_02615 at 557.902 kb on + strand, within AO353_02615 at 557.902 kb on + strand, within AO353_02615 at 557.903 kb on - strand, within AO353_02615 at 557.903 kb on - strand, within AO353_02615 at 557.903 kb on - strand, within AO353_02615 at 557.903 kb on - strand, within AO353_02615 at 558.142 kb on + strand, within AO353_02615 at 558.142 kb on + strand, within AO353_02615 at 558.142 kb on + strand, within AO353_02615 at 558.142 kb on + strand, within AO353_02615 at 558.143 kb on - strand, within AO353_02615 at 558.143 kb on - strand, within AO353_02615 at 558.306 kb on + strand, within AO353_02615 at 558.500 kb on - strand, within AO353_02615 at 558.500 kb on - strand, within AO353_02615 at 558.500 kb on - strand, within AO353_02615 at 558.572 kb on + strand, within AO353_02615 at 558.831 kb on + strand at 558.832 kb on - strand at 559.272 kb on + strand, within AO353_02620 at 559.272 kb on + strand, within AO353_02620 at 559.272 kb on + strand, within AO353_02620 at 559.273 kb on - strand, within AO353_02620 at 559.273 kb on - strand, within AO353_02620 at 559.273 kb on - strand, within AO353_02620 at 559.273 kb on - strand, within AO353_02620 at 559.273 kb on - strand, within AO353_02620 at 559.273 kb on - strand, within AO353_02620 at 559.482 kb on + strand, within AO353_02620 at 559.518 kb on + strand, within AO353_02620 at 559.519 kb on - strand, within AO353_02620 at 559.620 kb on + strand, within AO353_02620 at 559.620 kb on + strand, within AO353_02620 at 559.620 kb on + strand, within AO353_02620 at 559.620 kb on + strand, within AO353_02620 at 559.621 kb on - strand, within AO353_02620 at 559.621 kb on - strand, within AO353_02620 at 559.621 kb on - strand, within AO353_02620 at 559.621 kb on - strand, within AO353_02620 at 559.621 kb on - strand, within AO353_02620 at 559.623 kb on + strand, within AO353_02620 at 559.804 kb on + strand at 559.804 kb on + strand at 559.804 kb on + strand at 559.804 kb on + strand at 559.804 kb on + strand at 559.805 kb on - strand at 559.805 kb on - strand at 559.805 kb on - strand at 559.805 kb on - strand at 559.805 kb on - strand at 559.805 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 556,378 + AO353_02605 0.57 +0.3 556,379 - AO353_02605 0.57 -1.0 556,379 - AO353_02605 0.57 -1.1 556,833 + -0.2 556,833 + -0.7 556,833 + -1.4 556,834 - -0.5 556,841 + -0.6 556,841 + -0.2 556,841 + -1.9 556,841 + +0.7 556,842 - +1.7 556,842 - +0.9 556,842 - +0.8 556,936 + AO353_02610 0.20 -0.8 556,937 - AO353_02610 0.20 -1.9 556,937 - AO353_02610 0.20 +0.0 556,937 - AO353_02610 0.20 -1.5 556,937 - AO353_02610 0.20 -0.9 557,115 + AO353_02610 0.55 -1.1 557,116 - AO353_02610 0.55 -0.1 557,116 - AO353_02610 0.55 +0.1 557,263 + AO353_02610 0.83 -0.7 557,263 + AO353_02610 0.83 -0.6 557,263 + AO353_02610 0.83 +1.1 557,263 + AO353_02610 0.83 +0.4 557,263 + AO353_02610 0.83 -0.6 557,263 + AO353_02610 0.83 -0.7 557,263 + AO353_02610 0.83 -1.2 557,263 + AO353_02610 0.83 +1.7 557,263 + AO353_02610 0.83 -1.9 557,263 + AO353_02610 0.83 -1.2 557,263 + AO353_02610 0.83 +0.9 557,263 + AO353_02610 0.83 -0.3 557,263 + AO353_02610 0.83 -0.7 557,264 - AO353_02610 0.83 -0.7 557,264 - AO353_02610 0.83 -0.2 557,264 - AO353_02610 0.83 +2.7 557,264 - AO353_02610 0.83 -0.9 557,264 - AO353_02610 0.83 +0.0 557,264 - AO353_02610 0.83 -0.3 557,264 - AO353_02610 0.83 +0.3 557,264 - AO353_02610 0.83 -0.7 557,316 - +0.5 557,389 + -0.4 557,389 + +1.1 557,389 + -1.3 557,472 + -1.3 557,472 + -1.1 557,473 - -0.3 557,473 - -1.7 557,543 - AO353_02615 0.12 +0.1 557,543 - AO353_02615 0.12 -0.6 557,543 - AO353_02615 0.12 -0.3 557,657 - AO353_02615 0.20 +1.2 557,759 + AO353_02615 0.27 +0.8 557,759 + AO353_02615 0.27 -3.6 557,832 + AO353_02615 0.32 -2.2 557,832 + AO353_02615 0.32 -0.1 557,832 + AO353_02615 0.32 +1.6 557,832 + AO353_02615 0.32 -2.0 557,832 + AO353_02615 0.32 +1.9 557,832 + AO353_02615 0.32 -0.9 557,832 + AO353_02615 0.32 -2.6 557,833 - AO353_02615 0.32 -1.4 557,833 - AO353_02615 0.32 +0.5 557,833 - AO353_02615 0.32 -0.4 557,833 - AO353_02615 0.32 -0.6 557,833 - AO353_02615 0.32 -0.4 557,833 - AO353_02615 0.32 -0.3 557,833 - AO353_02615 0.32 -1.2 557,833 - AO353_02615 0.32 -0.6 557,833 - AO353_02615 0.32 -3.3 557,871 - AO353_02615 0.35 -0.9 557,902 + AO353_02615 0.37 -1.0 557,902 + AO353_02615 0.37 -1.6 557,902 + AO353_02615 0.37 -0.4 557,902 + AO353_02615 0.37 -0.6 557,903 - AO353_02615 0.37 -0.6 557,903 - AO353_02615 0.37 -0.8 557,903 - AO353_02615 0.37 -0.4 557,903 - AO353_02615 0.37 -2.0 558,142 + AO353_02615 0.54 -1.3 558,142 + AO353_02615 0.54 -0.4 558,142 + AO353_02615 0.54 -2.2 558,142 + AO353_02615 0.54 -1.9 558,143 - AO353_02615 0.54 +0.6 558,143 - AO353_02615 0.54 -1.4 558,306 + AO353_02615 0.65 -1.7 558,500 - AO353_02615 0.78 -0.4 558,500 - AO353_02615 0.78 -1.7 558,500 - AO353_02615 0.78 +1.0 558,572 + AO353_02615 0.83 -2.4 558,831 + +0.9 558,832 - -0.9 559,272 + AO353_02620 0.46 -2.9 559,272 + AO353_02620 0.46 -2.2 559,272 + AO353_02620 0.46 -0.8 559,273 - AO353_02620 0.46 -0.9 559,273 - AO353_02620 0.46 -0.6 559,273 - AO353_02620 0.46 -1.1 559,273 - AO353_02620 0.46 -1.6 559,273 - AO353_02620 0.46 -0.1 559,273 - AO353_02620 0.46 +0.0 559,482 + AO353_02620 0.67 -0.6 559,518 + AO353_02620 0.71 -1.2 559,519 - AO353_02620 0.71 +0.6 559,620 + AO353_02620 0.81 -0.9 559,620 + AO353_02620 0.81 +1.5 559,620 + AO353_02620 0.81 -0.4 559,620 + AO353_02620 0.81 +0.6 559,621 - AO353_02620 0.81 -1.5 559,621 - AO353_02620 0.81 -1.3 559,621 - AO353_02620 0.81 -0.8 559,621 - AO353_02620 0.81 +0.1 559,621 - AO353_02620 0.81 -1.0 559,623 + AO353_02620 0.82 -0.1 559,804 + -0.3 559,804 + +0.3 559,804 + +0.2 559,804 + -1.0 559,804 + -1.6 559,805 - -1.0 559,805 - +0.6 559,805 - +0.3 559,805 - +0.6 559,805 - +0.6 559,805 - +1.3
Or see this region's nucleotide sequence