Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_02400

Experiment: L-Citrulline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_02395 and AO353_02400 are separated by 695 nucleotidesAO353_02400 and AO353_02405 are separated by 348 nucleotides AO353_02395: AO353_02395 - mechanosensitive ion channel protein, at 508,900 to 511,056 _02395 AO353_02400: AO353_02400 - MFS transporter, at 511,752 to 512,465 _02400 AO353_02405: AO353_02405 - ABC transporter substrate-binding protein, at 512,814 to 513,890 _02405 Position (kb) 511 512 513Strain fitness (log2 ratio) -2 -1 0 1 2at 510.754 kb on + strand, within AO353_02395at 510.754 kb on + strand, within AO353_02395at 510.754 kb on + strand, within AO353_02395at 510.754 kb on + strand, within AO353_02395at 510.755 kb on - strand, within AO353_02395at 510.755 kb on - strand, within AO353_02395at 510.755 kb on - strand, within AO353_02395at 510.755 kb on - strand, within AO353_02395at 510.824 kb on + strand, within AO353_02395at 510.825 kb on - strand, within AO353_02395at 511.022 kb on + strandat 511.022 kb on + strandat 511.022 kb on + strandat 511.022 kb on + strandat 511.022 kb on + strandat 511.022 kb on + strandat 511.022 kb on + strandat 511.022 kb on + strandat 511.023 kb on - strandat 511.023 kb on - strandat 511.023 kb on - strandat 511.023 kb on - strandat 511.023 kb on - strandat 511.023 kb on - strandat 511.023 kb on - strandat 511.023 kb on - strandat 511.023 kb on - strandat 511.025 kb on + strandat 511.026 kb on - strandat 511.026 kb on - strandat 511.054 kb on + strandat 511.054 kb on + strandat 511.117 kb on + strandat 511.117 kb on + strandat 511.117 kb on + strandat 511.118 kb on - strandat 511.118 kb on - strandat 511.136 kb on - strandat 511.181 kb on - strandat 511.445 kb on - strandat 511.445 kb on - strandat 511.445 kb on - strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.516 kb on + strandat 511.520 kb on + strandat 511.520 kb on + strandat 511.520 kb on + strandat 511.520 kb on + strandat 511.520 kb on + strandat 511.520 kb on + strandat 511.520 kb on + strandat 511.520 kb on + strandat 511.520 kb on + strandat 511.520 kb on + strandat 511.520 kb on + strandat 511.520 kb on + strandat 511.520 kb on + strandat 511.583 kb on - strandat 511.583 kb on - strandat 511.583 kb on - strandat 511.583 kb on - strandat 511.583 kb on - strandat 511.583 kb on - strandat 511.583 kb on - strandat 511.583 kb on - strandat 511.583 kb on - strandat 511.589 kb on - strandat 511.589 kb on - strandat 511.589 kb on - strandat 511.589 kb on - strandat 511.593 kb on - strandat 511.593 kb on - strandat 511.593 kb on - strandat 511.593 kb on - strandat 511.593 kb on - strandat 511.593 kb on - strandat 511.593 kb on - strandat 511.593 kb on - strandat 511.655 kb on - strandat 511.655 kb on - strandat 511.655 kb on - strandat 511.655 kb on - strandat 511.655 kb on - strandat 511.655 kb on - strandat 511.655 kb on - strandat 511.655 kb on - strandat 511.655 kb on - strandat 511.655 kb on - strandat 511.655 kb on - strandat 511.655 kb on - strandat 511.655 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.661 kb on - strandat 511.665 kb on - strandat 511.665 kb on - strandat 511.665 kb on - strandat 511.665 kb on - strandat 511.665 kb on - strandat 511.665 kb on - strandat 511.665 kb on - strandat 511.665 kb on - strandat 511.721 kb on + strandat 511.721 kb on + strandat 511.834 kb on + strand, within AO353_02400at 511.834 kb on + strand, within AO353_02400at 511.834 kb on + strand, within AO353_02400at 511.835 kb on - strand, within AO353_02400at 511.835 kb on - strand, within AO353_02400at 511.942 kb on + strand, within AO353_02400at 511.943 kb on - strand, within AO353_02400at 511.943 kb on - strand, within AO353_02400at 511.954 kb on + strand, within AO353_02400at 511.954 kb on + strand, within AO353_02400at 511.966 kb on + strand, within AO353_02400at 511.966 kb on + strand, within AO353_02400at 511.966 kb on + strand, within AO353_02400at 511.966 kb on + strand, within AO353_02400at 511.966 kb on + strand, within AO353_02400at 511.967 kb on - strand, within AO353_02400at 511.967 kb on - strand, within AO353_02400at 511.967 kb on - strand, within AO353_02400at 511.967 kb on - strand, within AO353_02400at 511.967 kb on - strand, within AO353_02400at 511.967 kb on - strand, within AO353_02400at 511.967 kb on - strand, within AO353_02400at 511.967 kb on - strand, within AO353_02400at 512.032 kb on + strand, within AO353_02400at 512.033 kb on - strand, within AO353_02400at 512.044 kb on + strand, within AO353_02400at 512.044 kb on + strand, within AO353_02400at 512.044 kb on + strand, within AO353_02400at 512.044 kb on + strand, within AO353_02400at 512.045 kb on - strand, within AO353_02400at 512.045 kb on - strand, within AO353_02400at 512.045 kb on - strand, within AO353_02400at 512.045 kb on - strand, within AO353_02400at 512.045 kb on - strand, within AO353_02400at 512.045 kb on - strand, within AO353_02400at 512.045 kb on - strand, within AO353_02400at 512.045 kb on - strand, within AO353_02400at 512.045 kb on - strand, within AO353_02400at 512.233 kb on + strand, within AO353_02400at 512.233 kb on + strand, within AO353_02400at 512.233 kb on + strand, within AO353_02400at 512.233 kb on + strand, within AO353_02400at 512.233 kb on + strand, within AO353_02400at 512.472 kb on + strandat 512.473 kb on - strandat 512.473 kb on - strandat 512.473 kb on - strandat 512.476 kb on + strandat 512.476 kb on + strandat 512.476 kb on + strandat 512.476 kb on + strandat 512.476 kb on + strandat 512.476 kb on + strandat 512.476 kb on + strandat 512.476 kb on + strandat 512.477 kb on - strandat 512.477 kb on - strandat 512.477 kb on - strandat 512.477 kb on - strandat 512.485 kb on + strandat 512.538 kb on + strandat 512.538 kb on + strandat 512.539 kb on - strandat 512.539 kb on - strandat 512.556 kb on + strandat 512.556 kb on + strandat 512.556 kb on + strandat 512.556 kb on + strandat 512.556 kb on + strandat 512.556 kb on + strandat 512.556 kb on + strandat 512.556 kb on + strandat 512.556 kb on + strandat 512.556 kb on + strandat 512.556 kb on + strandat 512.556 kb on + strandat 512.556 kb on + strandat 512.556 kb on + strandat 512.556 kb on + strandat 512.557 kb on - strandat 512.557 kb on - strandat 512.557 kb on - strandat 512.557 kb on - strandat 512.557 kb on - strandat 512.557 kb on - strandat 512.557 kb on - strandat 512.557 kb on - strandat 512.557 kb on - strandat 512.557 kb on - strandat 512.557 kb on - strandat 512.557 kb on - strandat 512.557 kb on - strandat 512.557 kb on - strandat 512.557 kb on - strandat 512.560 kb on + strandat 512.560 kb on + strandat 512.560 kb on + strandat 512.560 kb on + strandat 512.560 kb on + strandat 512.560 kb on + strandat 512.560 kb on + strandat 512.560 kb on + strandat 512.561 kb on - strandat 512.561 kb on - strandat 512.561 kb on - strandat 512.561 kb on - strandat 512.561 kb on - strandat 512.561 kb on - strandat 512.561 kb on - strandat 512.561 kb on - strandat 512.561 kb on - strandat 512.612 kb on + strandat 512.613 kb on - strandat 512.654 kb on + strandat 512.654 kb on + strandat 512.655 kb on - strandat 512.655 kb on - strandat 512.655 kb on - strandat 512.655 kb on - strandat 512.660 kb on + strandat 512.660 kb on + strandat 512.660 kb on + strandat 512.661 kb on - strandat 512.661 kb on - strandat 512.661 kb on - strandat 512.678 kb on - strandat 512.738 kb on + strandat 512.738 kb on + strandat 512.738 kb on + strandat 512.738 kb on + strandat 512.738 kb on + strandat 512.738 kb on + strandat 512.752 kb on + strandat 512.753 kb on - strandat 512.753 kb on - strandat 512.753 kb on - strandat 512.753 kb on - strandat 512.753 kb on - strandat 512.763 kb on + strandat 512.763 kb on + strandat 512.763 kb on + strandat 512.764 kb on - strandat 512.764 kb on - strandat 512.764 kb on - strandat 512.794 kb on + strandat 512.794 kb on + strandat 512.794 kb on + strandat 512.794 kb on + strandat 512.795 kb on - strandat 512.842 kb on + strandat 512.893 kb on + strandat 512.893 kb on + strandat 512.894 kb on - strandat 512.894 kb on - strandat 512.975 kb on + strand, within AO353_02405at 512.975 kb on + strand, within AO353_02405at 512.975 kb on + strand, within AO353_02405at 512.976 kb on - strand, within AO353_02405at 512.976 kb on - strand, within AO353_02405at 512.976 kb on - strand, within AO353_02405at 512.976 kb on - strand, within AO353_02405at 513.000 kb on + strand, within AO353_02405at 513.001 kb on - strand, within AO353_02405at 513.147 kb on + strand, within AO353_02405at 513.147 kb on + strand, within AO353_02405at 513.147 kb on + strand, within AO353_02405at 513.147 kb on + strand, within AO353_02405at 513.147 kb on + strand, within AO353_02405at 513.147 kb on + strand, within AO353_02405at 513.147 kb on + strand, within AO353_02405at 513.148 kb on - strand, within AO353_02405at 513.148 kb on - strand, within AO353_02405at 513.148 kb on - strand, within AO353_02405at 513.148 kb on - strand, within AO353_02405at 513.148 kb on - strand, within AO353_02405at 513.216 kb on + strand, within AO353_02405at 513.216 kb on + strand, within AO353_02405at 513.216 kb on + strand, within AO353_02405at 513.217 kb on - strand, within AO353_02405at 513.217 kb on - strand, within AO353_02405at 513.306 kb on + strand, within AO353_02405at 513.306 kb on + strand, within AO353_02405at 513.306 kb on + strand, within AO353_02405at 513.306 kb on + strand, within AO353_02405at 513.306 kb on + strand, within AO353_02405at 513.307 kb on - strand, within AO353_02405at 513.307 kb on - strand, within AO353_02405at 513.307 kb on - strand, within AO353_02405at 513.307 kb on - strand, within AO353_02405at 513.307 kb on - strand, within AO353_02405at 513.358 kb on + strand, within AO353_02405at 513.358 kb on + strand, within AO353_02405at 513.358 kb on + strand, within AO353_02405at 513.358 kb on + strand, within AO353_02405at 513.358 kb on + strandat 513.358 kb on + strand, within AO353_02405at 513.358 kb on + strand, within AO353_02405at 513.358 kb on + strand, within AO353_02405at 513.359 kb on - strand, within AO353_02405at 513.359 kb on - strand, within AO353_02405at 513.359 kb on - strand, within AO353_02405at 513.398 kb on + strand, within AO353_02405at 513.399 kb on - strand, within AO353_02405at 513.399 kb on - strand, within AO353_02405at 513.399 kb on - strand, within AO353_02405

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Citrulline (N)
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510,754 + AO353_02395 0.86 +1.9
510,754 + AO353_02395 0.86 -0.3
510,754 + AO353_02395 0.86 +0.3
510,754 + AO353_02395 0.86 +0.6
510,755 - AO353_02395 0.86 +0.9
510,755 - AO353_02395 0.86 -0.1
510,755 - AO353_02395 0.86 +1.1
510,755 - AO353_02395 0.86 -1.1
510,824 + AO353_02395 0.89 -0.0
510,825 - AO353_02395 0.89 -1.2
511,022 + -0.5
511,022 + -0.9
511,022 + -0.3
511,022 + -0.5
511,022 + -0.4
511,022 + -0.5
511,022 + -2.5
511,022 + +0.8
511,023 - +0.7
511,023 - +0.9
511,023 - -0.0
511,023 - -0.4
511,023 - +1.0
511,023 - +0.4
511,023 - -1.1
511,023 - +0.6
511,023 - -0.6
511,025 + +0.1
511,026 - +0.2
511,026 - +0.2
511,054 + +1.0
511,054 + +0.2
511,117 + -0.6
511,117 + -0.3
511,117 + -0.1
511,118 - +1.1
511,118 - +1.0
511,136 - -0.5
511,181 - +0.3
511,445 - -1.0
511,445 - -0.6
511,445 - +0.5
511,516 + +0.4
511,516 + -1.0
511,516 + -0.5
511,516 + +0.5
511,516 + +0.5
511,516 + +0.5
511,516 + -0.7
511,516 + -0.4
511,516 + -0.7
511,516 + +0.1
511,516 + -1.7
511,516 + +0.2
511,516 + -0.6
511,516 + -0.3
511,516 + +1.9
511,516 + +1.5
511,516 + -0.3
511,516 + -0.7
511,516 + +1.3
511,516 + -0.5
511,516 + +0.5
511,516 + -1.7
511,516 + -0.4
511,516 + -0.5
511,516 + -0.1
511,516 + +0.6
511,520 + -0.1
511,520 + +0.9
511,520 + +0.6
511,520 + -0.8
511,520 + +0.7
511,520 + -0.1
511,520 + -0.5
511,520 + -1.0
511,520 + +0.3
511,520 + +0.2
511,520 + +0.6
511,520 + +1.3
511,520 + -0.9
511,583 - +0.0
511,583 - +0.9
511,583 - -0.8
511,583 - +0.6
511,583 - +0.4
511,583 - +0.7
511,583 - -0.7
511,583 - -1.5
511,583 - -0.6
511,589 - +0.5
511,589 - +0.3
511,589 - -0.8
511,589 - +0.4
511,593 - -0.6
511,593 - +0.1
511,593 - +0.4
511,593 - -0.3
511,593 - +0.3
511,593 - +2.1
511,593 - +0.9
511,593 - +0.4
511,655 - -0.6
511,655 - +0.1
511,655 - -0.3
511,655 - +0.9
511,655 - +0.8
511,655 - +0.1
511,655 - +0.7
511,655 - +1.4
511,655 - -0.6
511,655 - +1.0
511,655 - +1.4
511,655 - +0.1
511,655 - +0.3
511,661 - -0.8
511,661 - +1.5
511,661 - +0.2
511,661 - -1.1
511,661 - -0.2
511,661 - -0.5
511,661 - -0.2
511,661 - +0.3
511,661 - +0.2
511,661 - -1.0
511,661 - -0.2
511,661 - -0.2
511,661 - +0.1
511,661 - -0.9
511,661 - +0.2
511,661 - +1.2
511,661 - +0.1
511,661 - -1.3
511,661 - -1.8
511,661 - +0.9
511,661 - -1.3
511,661 - -0.1
511,661 - +0.6
511,665 - +0.9
511,665 - +1.7
511,665 - -0.1
511,665 - -0.7
511,665 - +2.3
511,665 - -0.2
511,665 - +0.4
511,665 - -0.2
511,721 + +1.9
511,721 + -1.3
511,834 + AO353_02400 0.11 -0.3
511,834 + AO353_02400 0.11 +1.0
511,834 + AO353_02400 0.11 +0.9
511,835 - AO353_02400 0.12 +1.0
511,835 - AO353_02400 0.12 +0.7
511,942 + AO353_02400 0.27 +0.2
511,943 - AO353_02400 0.27 +0.1
511,943 - AO353_02400 0.27 +0.2
511,954 + AO353_02400 0.28 +1.9
511,954 + AO353_02400 0.28 -0.0
511,966 + AO353_02400 0.30 +0.7
511,966 + AO353_02400 0.30 +0.4
511,966 + AO353_02400 0.30 +0.2
511,966 + AO353_02400 0.30 -0.4
511,966 + AO353_02400 0.30 -0.7
511,967 - AO353_02400 0.30 +0.1
511,967 - AO353_02400 0.30 +2.7
511,967 - AO353_02400 0.30 +0.2
511,967 - AO353_02400 0.30 +0.2
511,967 - AO353_02400 0.30 -1.2
511,967 - AO353_02400 0.30 -0.9
511,967 - AO353_02400 0.30 +0.4
511,967 - AO353_02400 0.30 +0.6
512,032 + AO353_02400 0.39 -0.3
512,033 - AO353_02400 0.39 +1.4
512,044 + AO353_02400 0.41 +0.6
512,044 + AO353_02400 0.41 -0.4
512,044 + AO353_02400 0.41 -0.4
512,044 + AO353_02400 0.41 -1.7
512,045 - AO353_02400 0.41 +0.6
512,045 - AO353_02400 0.41 +0.1
512,045 - AO353_02400 0.41 +0.5
512,045 - AO353_02400 0.41 +0.2
512,045 - AO353_02400 0.41 -0.2
512,045 - AO353_02400 0.41 +0.6
512,045 - AO353_02400 0.41 +0.7
512,045 - AO353_02400 0.41 +0.2
512,045 - AO353_02400 0.41 +0.9
512,233 + AO353_02400 0.67 +0.0
512,233 + AO353_02400 0.67 -0.7
512,233 + AO353_02400 0.67 +0.6
512,233 + AO353_02400 0.67 +1.6
512,233 + AO353_02400 0.67 +0.3
512,472 + -0.2
512,473 - +0.5
512,473 - +1.0
512,473 - -0.0
512,476 + +0.1
512,476 + -2.7
512,476 + -1.9
512,476 + -2.5
512,476 + -0.8
512,476 + -0.8
512,476 + +0.7
512,476 + +0.5
512,477 - -0.5
512,477 - -1.0
512,477 - -0.0
512,477 - +0.6
512,485 + -0.5
512,538 + +0.9
512,538 + -2.2
512,539 - +0.4
512,539 - +0.3
512,556 + -0.1
512,556 + +1.0
512,556 + -0.1
512,556 + +0.5
512,556 + -0.3
512,556 + -0.9
512,556 + -0.0
512,556 + -0.6
512,556 + +0.7
512,556 + +1.1
512,556 + -0.0
512,556 + +0.4
512,556 + -0.2
512,556 + -1.7
512,556 + -0.4
512,557 - +0.1
512,557 - -0.6
512,557 - -0.1
512,557 - +1.7
512,557 - +1.0
512,557 - -0.1
512,557 - +0.8
512,557 - -0.0
512,557 - +0.2
512,557 - -0.1
512,557 - -0.1
512,557 - +1.5
512,557 - -0.8
512,557 - -0.5
512,557 - +0.2
512,560 + -1.1
512,560 + +0.9
512,560 + +0.1
512,560 + +0.2
512,560 + +0.2
512,560 + +0.4
512,560 + -0.5
512,560 + -0.5
512,561 - +0.3
512,561 - +0.4
512,561 - -0.3
512,561 - +0.2
512,561 - -2.1
512,561 - -0.7
512,561 - -1.4
512,561 - -0.6
512,561 - -1.3
512,612 + +0.5
512,613 - +0.1
512,654 + -0.1
512,654 + -0.1
512,655 - -1.4
512,655 - +1.5
512,655 - -0.5
512,655 - -1.6
512,660 + -0.0
512,660 + +0.3
512,660 + -0.2
512,661 - -0.7
512,661 - +0.3
512,661 - +0.6
512,678 - -1.3
512,738 + +0.3
512,738 + +0.8
512,738 + -0.3
512,738 + -0.6
512,738 + -0.6
512,738 + -0.5
512,752 + -1.8
512,753 - +0.0
512,753 - -1.6
512,753 - -0.0
512,753 - +0.2
512,753 - +0.5
512,763 + -0.6
512,763 + +0.5
512,763 + -0.2
512,764 - +1.3
512,764 - -0.3
512,764 - -0.1
512,794 + +0.5
512,794 + -0.6
512,794 + +0.5
512,794 + +1.0
512,795 - -0.9
512,842 + +1.9
512,893 + -1.2
512,893 + +1.1
512,894 - +1.2
512,894 - +0.3
512,975 + AO353_02405 0.15 +0.3
512,975 + AO353_02405 0.15 -0.6
512,975 + AO353_02405 0.15 -0.3
512,976 - AO353_02405 0.15 +1.5
512,976 - AO353_02405 0.15 -0.7
512,976 - AO353_02405 0.15 +0.7
512,976 - AO353_02405 0.15 -0.8
513,000 + AO353_02405 0.17 -0.1
513,001 - AO353_02405 0.17 -0.9
513,147 + AO353_02405 0.31 -1.1
513,147 + AO353_02405 0.31 +0.4
513,147 + AO353_02405 0.31 +0.3
513,147 + AO353_02405 0.31 -0.1
513,147 + AO353_02405 0.31 +0.6
513,147 + AO353_02405 0.31 +0.4
513,147 + AO353_02405 0.31 +1.0
513,148 - AO353_02405 0.31 +0.5
513,148 - AO353_02405 0.31 -0.5
513,148 - AO353_02405 0.31 -0.0
513,148 - AO353_02405 0.31 +0.7
513,148 - AO353_02405 0.31 +0.1
513,216 + AO353_02405 0.37 -0.7
513,216 + AO353_02405 0.37 +0.7
513,216 + AO353_02405 0.37 -0.3
513,217 - AO353_02405 0.37 -0.2
513,217 - AO353_02405 0.37 +0.1
513,306 + AO353_02405 0.46 -1.2
513,306 + AO353_02405 0.46 +0.1
513,306 + AO353_02405 0.46 -0.7
513,306 + AO353_02405 0.46 -0.6
513,306 + AO353_02405 0.46 -0.4
513,307 - AO353_02405 0.46 -0.2
513,307 - AO353_02405 0.46 -1.6
513,307 - AO353_02405 0.46 -0.9
513,307 - AO353_02405 0.46 +1.2
513,307 - AO353_02405 0.46 +0.5
513,358 + AO353_02405 0.51 +0.3
513,358 + AO353_02405 0.51 +0.7
513,358 + AO353_02405 0.51 -0.4
513,358 + AO353_02405 0.51 +0.7
513,358 + +0.9
513,358 + AO353_02405 0.51 -0.4
513,358 + AO353_02405 0.51 -1.1
513,358 + AO353_02405 0.51 -0.6
513,359 - AO353_02405 0.51 -1.0
513,359 - AO353_02405 0.51 -0.6
513,359 - AO353_02405 0.51 +0.3
513,398 + AO353_02405 0.54 +0.7
513,399 - AO353_02405 0.54 +0.1
513,399 - AO353_02405 0.54 +1.1
513,399 - AO353_02405 0.54 -2.0

Or see this region's nucleotide sequence