Experiment: selenate 0.5 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_6072 and Pf6N2E2_6073 are separated by 235 nucleotides Pf6N2E2_6073 and Pf6N2E2_6074 are separated by 106 nucleotides Pf6N2E2_6074 and Pf6N2E2_6075 are separated by 96 nucleotides
Pf6N2E2_6072 - FIG137594: Putative iron-regulated membrane protein, at 6,892,197 to 6,893,411
_6072
Pf6N2E2_6073 - PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein, at 6,893,647 to 6,894,108
_6073
Pf6N2E2_6074 - Redox-sensitive transcriptional activator SoxR, at 6,894,215 to 6,894,667
_6074
Pf6N2E2_6075 - Chromosome segregation ATPases, at 6,894,764 to 6,895,129
_6075
Position (kb)
6893
6894
6895 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6892.817 kb on + strand, within Pf6N2E2_6072 at 6892.818 kb on - strand, within Pf6N2E2_6072 at 6892.909 kb on + strand, within Pf6N2E2_6072 at 6892.909 kb on + strand, within Pf6N2E2_6072 at 6892.909 kb on + strand, within Pf6N2E2_6072 at 6892.909 kb on + strand, within Pf6N2E2_6072 at 6892.910 kb on - strand, within Pf6N2E2_6072 at 6892.969 kb on + strand, within Pf6N2E2_6072 at 6892.984 kb on + strand, within Pf6N2E2_6072 at 6892.984 kb on + strand, within Pf6N2E2_6072 at 6892.984 kb on + strand, within Pf6N2E2_6072 at 6892.985 kb on - strand, within Pf6N2E2_6072 at 6893.080 kb on + strand, within Pf6N2E2_6072 at 6893.092 kb on + strand, within Pf6N2E2_6072 at 6893.092 kb on + strand, within Pf6N2E2_6072 at 6893.092 kb on + strand, within Pf6N2E2_6072 at 6893.092 kb on + strand, within Pf6N2E2_6072 at 6893.092 kb on + strand, within Pf6N2E2_6072 at 6893.224 kb on + strand, within Pf6N2E2_6072 at 6893.224 kb on + strand, within Pf6N2E2_6072 at 6893.224 kb on + strand, within Pf6N2E2_6072 at 6893.224 kb on + strand, within Pf6N2E2_6072 at 6893.225 kb on - strand, within Pf6N2E2_6072 at 6893.225 kb on - strand, within Pf6N2E2_6072 at 6893.369 kb on + strand at 6893.369 kb on + strand at 6893.369 kb on + strand at 6893.369 kb on + strand at 6893.369 kb on + strand at 6893.370 kb on - strand at 6893.370 kb on - strand at 6893.370 kb on - strand at 6893.370 kb on - strand at 6893.444 kb on + strand at 6893.473 kb on + strand at 6893.473 kb on + strand at 6893.474 kb on - strand at 6893.507 kb on + strand at 6893.508 kb on - strand at 6893.516 kb on + strand at 6893.516 kb on + strand at 6893.516 kb on + strand at 6893.516 kb on + strand at 6893.517 kb on - strand at 6893.517 kb on - strand at 6893.517 kb on - strand at 6893.517 kb on - strand at 6893.520 kb on + strand at 6893.855 kb on + strand, within Pf6N2E2_6073 at 6893.855 kb on + strand, within Pf6N2E2_6073 at 6893.855 kb on + strand, within Pf6N2E2_6073 at 6893.855 kb on + strand, within Pf6N2E2_6073 at 6893.855 kb on + strand, within Pf6N2E2_6073 at 6893.856 kb on - strand, within Pf6N2E2_6073 at 6893.856 kb on - strand, within Pf6N2E2_6073 at 6893.856 kb on - strand, within Pf6N2E2_6073 at 6893.856 kb on - strand, within Pf6N2E2_6073 at 6893.856 kb on - strand, within Pf6N2E2_6073 at 6893.856 kb on - strand, within Pf6N2E2_6073 at 6893.856 kb on - strand, within Pf6N2E2_6073 at 6893.856 kb on - strand, within Pf6N2E2_6073 at 6893.857 kb on + strand, within Pf6N2E2_6073 at 6893.857 kb on + strand, within Pf6N2E2_6073 at 6893.857 kb on + strand, within Pf6N2E2_6073 at 6893.857 kb on + strand, within Pf6N2E2_6073 at 6893.857 kb on + strand, within Pf6N2E2_6073 at 6893.857 kb on + strand, within Pf6N2E2_6073 at 6893.857 kb on + strand, within Pf6N2E2_6073 at 6893.857 kb on + strand, within Pf6N2E2_6073 at 6893.857 kb on + strand, within Pf6N2E2_6073 at 6893.858 kb on - strand, within Pf6N2E2_6073 at 6893.858 kb on - strand, within Pf6N2E2_6073 at 6893.858 kb on - strand, within Pf6N2E2_6073 at 6893.858 kb on - strand, within Pf6N2E2_6073 at 6893.858 kb on - strand, within Pf6N2E2_6073 at 6893.858 kb on - strand, within Pf6N2E2_6073 at 6893.858 kb on - strand, within Pf6N2E2_6073 at 6893.858 kb on - strand, within Pf6N2E2_6073 at 6893.858 kb on - strand, within Pf6N2E2_6073 at 6893.858 kb on - strand, within Pf6N2E2_6073 at 6893.858 kb on - strand, within Pf6N2E2_6073 at 6894.023 kb on + strand, within Pf6N2E2_6073 at 6894.062 kb on + strand at 6894.063 kb on - strand at 6894.171 kb on + strand at 6894.171 kb on + strand at 6894.172 kb on - strand at 6894.173 kb on + strand at 6894.173 kb on + strand at 6894.173 kb on + strand at 6894.174 kb on - strand at 6894.174 kb on - strand at 6894.174 kb on - strand at 6894.174 kb on - strand at 6894.174 kb on - strand at 6894.174 kb on - strand at 6894.515 kb on + strand, within Pf6N2E2_6074 at 6894.515 kb on + strand, within Pf6N2E2_6074 at 6894.516 kb on - strand, within Pf6N2E2_6074 at 6894.528 kb on + strand, within Pf6N2E2_6074 at 6894.529 kb on - strand, within Pf6N2E2_6074 at 6894.582 kb on + strand, within Pf6N2E2_6074 at 6894.582 kb on + strand, within Pf6N2E2_6074 at 6894.583 kb on - strand, within Pf6N2E2_6074 at 6894.583 kb on - strand, within Pf6N2E2_6074 at 6894.583 kb on - strand, within Pf6N2E2_6074 at 6894.583 kb on - strand, within Pf6N2E2_6074 at 6894.710 kb on - strand at 6894.743 kb on + strand at 6894.743 kb on + strand at 6894.743 kb on + strand at 6894.744 kb on - strand at 6894.944 kb on + strand, within Pf6N2E2_6075 at 6894.945 kb on - strand, within Pf6N2E2_6075 at 6894.945 kb on - strand, within Pf6N2E2_6075 at 6894.945 kb on - strand, within Pf6N2E2_6075
Per-strain Table
Position Strand Gene LocusTag Fraction selenate 0.5 M remove 6,892,817 + Pf6N2E2_6072 0.51 -0.7 6,892,818 - Pf6N2E2_6072 0.51 +1.4 6,892,909 + Pf6N2E2_6072 0.59 -1.3 6,892,909 + Pf6N2E2_6072 0.59 -0.6 6,892,909 + Pf6N2E2_6072 0.59 -0.7 6,892,909 + Pf6N2E2_6072 0.59 -0.5 6,892,910 - Pf6N2E2_6072 0.59 +0.9 6,892,969 + Pf6N2E2_6072 0.64 +0.4 6,892,984 + Pf6N2E2_6072 0.65 -0.2 6,892,984 + Pf6N2E2_6072 0.65 -0.0 6,892,984 + Pf6N2E2_6072 0.65 +0.2 6,892,985 - Pf6N2E2_6072 0.65 -0.1 6,893,080 + Pf6N2E2_6072 0.73 -0.3 6,893,092 + Pf6N2E2_6072 0.74 +0.4 6,893,092 + Pf6N2E2_6072 0.74 +1.2 6,893,092 + Pf6N2E2_6072 0.74 -0.4 6,893,092 + Pf6N2E2_6072 0.74 -0.8 6,893,092 + Pf6N2E2_6072 0.74 +0.8 6,893,224 + Pf6N2E2_6072 0.85 +1.0 6,893,224 + Pf6N2E2_6072 0.85 +0.4 6,893,224 + Pf6N2E2_6072 0.85 +1.0 6,893,224 + Pf6N2E2_6072 0.85 +0.3 6,893,225 - Pf6N2E2_6072 0.85 +0.7 6,893,225 - Pf6N2E2_6072 0.85 +1.3 6,893,369 + +0.8 6,893,369 + -0.4 6,893,369 + +0.5 6,893,369 + -0.5 6,893,369 + +0.3 6,893,370 - -0.8 6,893,370 - -0.4 6,893,370 - -0.7 6,893,370 - -0.0 6,893,444 + -0.1 6,893,473 + -2.6 6,893,473 + +1.0 6,893,474 - -0.2 6,893,507 + +0.8 6,893,508 - +0.7 6,893,516 + -2.1 6,893,516 + +0.2 6,893,516 + -1.8 6,893,516 + +0.2 6,893,517 - -0.3 6,893,517 - -0.3 6,893,517 - -1.4 6,893,517 - -0.0 6,893,520 + -0.6 6,893,855 + Pf6N2E2_6073 0.45 +1.5 6,893,855 + Pf6N2E2_6073 0.45 +0.3 6,893,855 + Pf6N2E2_6073 0.45 +1.0 6,893,855 + Pf6N2E2_6073 0.45 -0.4 6,893,855 + Pf6N2E2_6073 0.45 +0.2 6,893,856 - Pf6N2E2_6073 0.45 -0.3 6,893,856 - Pf6N2E2_6073 0.45 -0.7 6,893,856 - Pf6N2E2_6073 0.45 -0.4 6,893,856 - Pf6N2E2_6073 0.45 -1.7 6,893,856 - Pf6N2E2_6073 0.45 -0.6 6,893,856 - Pf6N2E2_6073 0.45 -0.1 6,893,856 - Pf6N2E2_6073 0.45 +0.8 6,893,856 - Pf6N2E2_6073 0.45 -0.2 6,893,857 + Pf6N2E2_6073 0.45 +1.4 6,893,857 + Pf6N2E2_6073 0.45 +0.7 6,893,857 + Pf6N2E2_6073 0.45 +0.1 6,893,857 + Pf6N2E2_6073 0.45 +1.5 6,893,857 + Pf6N2E2_6073 0.45 +0.8 6,893,857 + Pf6N2E2_6073 0.45 +0.0 6,893,857 + Pf6N2E2_6073 0.45 +1.6 6,893,857 + Pf6N2E2_6073 0.45 -1.0 6,893,857 + Pf6N2E2_6073 0.45 -2.4 6,893,858 - Pf6N2E2_6073 0.46 +0.6 6,893,858 - Pf6N2E2_6073 0.46 -0.0 6,893,858 - Pf6N2E2_6073 0.46 -0.1 6,893,858 - Pf6N2E2_6073 0.46 -0.0 6,893,858 - Pf6N2E2_6073 0.46 +1.2 6,893,858 - Pf6N2E2_6073 0.46 +0.4 6,893,858 - Pf6N2E2_6073 0.46 -1.8 6,893,858 - Pf6N2E2_6073 0.46 +0.7 6,893,858 - Pf6N2E2_6073 0.46 -0.6 6,893,858 - Pf6N2E2_6073 0.46 +0.2 6,893,858 - Pf6N2E2_6073 0.46 +0.7 6,894,023 + Pf6N2E2_6073 0.81 -0.6 6,894,062 + +0.3 6,894,063 - -0.4 6,894,171 + +0.6 6,894,171 + +1.1 6,894,172 - +0.5 6,894,173 + +0.8 6,894,173 + -1.0 6,894,173 + -0.1 6,894,174 - +0.0 6,894,174 - -0.0 6,894,174 - +0.3 6,894,174 - -0.2 6,894,174 - +0.1 6,894,174 - -0.2 6,894,515 + Pf6N2E2_6074 0.66 +0.9 6,894,515 + Pf6N2E2_6074 0.66 +1.6 6,894,516 - Pf6N2E2_6074 0.66 +1.1 6,894,528 + Pf6N2E2_6074 0.69 +0.0 6,894,529 - Pf6N2E2_6074 0.69 +0.1 6,894,582 + Pf6N2E2_6074 0.81 +0.4 6,894,582 + Pf6N2E2_6074 0.81 -0.3 6,894,583 - Pf6N2E2_6074 0.81 -0.1 6,894,583 - Pf6N2E2_6074 0.81 +2.2 6,894,583 - Pf6N2E2_6074 0.81 +0.2 6,894,583 - Pf6N2E2_6074 0.81 -1.2 6,894,710 - -0.8 6,894,743 + -0.2 6,894,743 + -0.2 6,894,743 + +1.4 6,894,744 - +0.2 6,894,944 + Pf6N2E2_6075 0.49 +0.3 6,894,945 - Pf6N2E2_6075 0.49 +1.1 6,894,945 - Pf6N2E2_6075 0.49 +0.3 6,894,945 - Pf6N2E2_6075 0.49 -0.5
Or see this region's nucleotide sequence