Experiment: selenate 0.5 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_142 and Pf6N2E2_143 are separated by 177 nucleotides Pf6N2E2_143 and Pf6N2E2_144 are separated by 83 nucleotides Pf6N2E2_144 and Pf6N2E2_145 are separated by 17 nucleotides
Pf6N2E2_142 - Exodeoxyribonuclease III (EC 3.1.11.2), at 193,732 to 194,544
_142
Pf6N2E2_143 - Histone acetyltransferase HPA2 and related acetyltransferases, at 194,722 to 195,372
_143
Pf6N2E2_144 - Uncharacterized protein YtfM precursor, at 195,456 to 197,165
_144
Pf6N2E2_145 - putative exported protein, at 197,183 to 200,836
_145
Position (kb) 195
196
197
198 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 194.574 kb on + strand at 194.574 kb on + strand at 194.575 kb on - strand at 194.575 kb on - strand at 194.575 kb on - strand at 194.641 kb on + strand at 194.641 kb on + strand at 194.641 kb on + strand at 194.642 kb on - strand at 194.670 kb on + strand at 194.671 kb on - strand at 194.677 kb on + strand at 194.757 kb on + strand at 194.757 kb on + strand at 194.757 kb on + strand at 194.758 kb on - strand at 194.773 kb on + strand at 194.801 kb on - strand, within Pf6N2E2_143 at 194.801 kb on - strand, within Pf6N2E2_143 at 194.801 kb on - strand, within Pf6N2E2_143 at 194.801 kb on - strand, within Pf6N2E2_143 at 194.833 kb on + strand, within Pf6N2E2_143 at 194.833 kb on + strand, within Pf6N2E2_143 at 194.834 kb on - strand, within Pf6N2E2_143 at 194.834 kb on - strand, within Pf6N2E2_143 at 194.834 kb on - strand, within Pf6N2E2_143 at 194.834 kb on - strand, within Pf6N2E2_143 at 195.074 kb on - strand, within Pf6N2E2_143 at 195.074 kb on - strand, within Pf6N2E2_143 at 195.119 kb on + strand, within Pf6N2E2_143 at 195.119 kb on + strand, within Pf6N2E2_143 at 195.119 kb on + strand, within Pf6N2E2_143 at 195.119 kb on + strand, within Pf6N2E2_143 at 195.119 kb on + strand, within Pf6N2E2_143 at 195.120 kb on - strand, within Pf6N2E2_143 at 195.120 kb on - strand, within Pf6N2E2_143 at 195.120 kb on - strand, within Pf6N2E2_143 at 195.192 kb on + strand, within Pf6N2E2_143 at 195.192 kb on + strand, within Pf6N2E2_143 at 195.192 kb on + strand, within Pf6N2E2_143 at 195.192 kb on + strand, within Pf6N2E2_143 at 195.192 kb on + strand, within Pf6N2E2_143 at 195.192 kb on + strand, within Pf6N2E2_143 at 195.193 kb on - strand, within Pf6N2E2_143 at 195.193 kb on - strand, within Pf6N2E2_143 at 195.193 kb on - strand, within Pf6N2E2_143 at 195.254 kb on - strand, within Pf6N2E2_143 at 195.254 kb on - strand, within Pf6N2E2_143 at 195.254 kb on - strand, within Pf6N2E2_143 at 195.254 kb on - strand, within Pf6N2E2_143 at 195.265 kb on + strand, within Pf6N2E2_143 at 195.266 kb on - strand, within Pf6N2E2_143 at 195.268 kb on - strand, within Pf6N2E2_143 at 195.281 kb on - strand, within Pf6N2E2_143 at 195.371 kb on - strand at 195.414 kb on + strand at 195.520 kb on + strand at 195.520 kb on + strand at 195.521 kb on - strand at 195.521 kb on - strand at 195.559 kb on + strand at 195.559 kb on + strand at 195.559 kb on + strand at 195.559 kb on + strand at 195.559 kb on + strand at 195.559 kb on + strand at 195.559 kb on + strand at 195.559 kb on + strand at 195.560 kb on - strand at 195.560 kb on - strand at 195.560 kb on - strand at 195.560 kb on - strand at 195.560 kb on - strand at 195.560 kb on - strand at 195.560 kb on - strand at 195.560 kb on - strand at 195.560 kb on - strand at 195.560 kb on - strand at 195.560 kb on - strand at 195.560 kb on - strand at 195.560 kb on - strand at 195.567 kb on + strand at 195.567 kb on + strand at 195.567 kb on + strand at 195.567 kb on + strand at 195.567 kb on + strand at 195.567 kb on + strand at 195.567 kb on + strand at 195.567 kb on + strand at 195.567 kb on + strand at 195.567 kb on + strand at 195.567 kb on + strand at 195.568 kb on - strand at 195.568 kb on - strand at 195.568 kb on - strand at 195.568 kb on - strand at 195.568 kb on - strand at 195.569 kb on + strand at 195.570 kb on - strand at 195.570 kb on - strand at 195.664 kb on - strand, within Pf6N2E2_144 at 195.666 kb on + strand, within Pf6N2E2_144 at 195.666 kb on + strand at 195.982 kb on - strand, within Pf6N2E2_144 at 195.999 kb on + strand, within Pf6N2E2_144 at 195.999 kb on + strand at 195.999 kb on + strand, within Pf6N2E2_144 at 196.000 kb on - strand, within Pf6N2E2_144 at 196.089 kb on + strand, within Pf6N2E2_144 at 196.090 kb on - strand, within Pf6N2E2_144 at 196.090 kb on - strand, within Pf6N2E2_144 at 196.141 kb on - strand, within Pf6N2E2_144 at 196.326 kb on + strand, within Pf6N2E2_144 at 196.326 kb on + strand, within Pf6N2E2_144 at 196.326 kb on + strand at 196.327 kb on - strand, within Pf6N2E2_144 at 196.327 kb on - strand, within Pf6N2E2_144 at 196.377 kb on + strand, within Pf6N2E2_144 at 196.378 kb on - strand, within Pf6N2E2_144 at 196.414 kb on + strand, within Pf6N2E2_144 at 196.414 kb on + strand, within Pf6N2E2_144 at 196.414 kb on + strand, within Pf6N2E2_144 at 196.414 kb on + strand, within Pf6N2E2_144 at 196.414 kb on + strand, within Pf6N2E2_144 at 196.414 kb on + strand, within Pf6N2E2_144 at 196.414 kb on + strand, within Pf6N2E2_144 at 196.414 kb on + strand, within Pf6N2E2_144 at 196.414 kb on + strand, within Pf6N2E2_144 at 196.414 kb on + strand, within Pf6N2E2_144 at 196.414 kb on + strand, within Pf6N2E2_144 at 196.414 kb on + strand, within Pf6N2E2_144 at 196.415 kb on - strand, within Pf6N2E2_144 at 196.415 kb on - strand, within Pf6N2E2_144 at 196.415 kb on - strand, within Pf6N2E2_144 at 196.415 kb on - strand, within Pf6N2E2_144 at 196.415 kb on - strand, within Pf6N2E2_144 at 196.415 kb on - strand, within Pf6N2E2_144 at 196.415 kb on - strand, within Pf6N2E2_144 at 196.415 kb on - strand, within Pf6N2E2_144 at 196.415 kb on - strand, within Pf6N2E2_144 at 196.415 kb on - strand, within Pf6N2E2_144 at 196.437 kb on + strand, within Pf6N2E2_144 at 196.437 kb on + strand, within Pf6N2E2_144 at 196.437 kb on + strand, within Pf6N2E2_144 at 196.437 kb on + strand, within Pf6N2E2_144 at 196.437 kb on + strand, within Pf6N2E2_144 at 196.438 kb on - strand, within Pf6N2E2_144 at 196.438 kb on - strand, within Pf6N2E2_144 at 196.438 kb on - strand, within Pf6N2E2_144 at 196.438 kb on - strand, within Pf6N2E2_144 at 196.438 kb on - strand, within Pf6N2E2_144 at 196.557 kb on + strand, within Pf6N2E2_144 at 196.611 kb on + strand, within Pf6N2E2_144 at 196.611 kb on + strand, within Pf6N2E2_144 at 196.611 kb on + strand, within Pf6N2E2_144 at 196.612 kb on - strand, within Pf6N2E2_144 at 196.612 kb on - strand, within Pf6N2E2_144 at 196.612 kb on - strand, within Pf6N2E2_144 at 196.617 kb on + strand, within Pf6N2E2_144 at 196.617 kb on + strand, within Pf6N2E2_144 at 196.617 kb on + strand, within Pf6N2E2_144 at 196.617 kb on + strand, within Pf6N2E2_144 at 196.617 kb on + strand, within Pf6N2E2_144 at 196.618 kb on - strand, within Pf6N2E2_144 at 196.618 kb on - strand, within Pf6N2E2_144 at 196.717 kb on + strand, within Pf6N2E2_144 at 196.717 kb on + strand, within Pf6N2E2_144 at 196.717 kb on + strand, within Pf6N2E2_144 at 196.718 kb on - strand, within Pf6N2E2_144 at 196.719 kb on + strand, within Pf6N2E2_144 at 196.719 kb on + strand, within Pf6N2E2_144 at 196.720 kb on - strand, within Pf6N2E2_144 at 196.720 kb on - strand, within Pf6N2E2_144 at 196.865 kb on - strand, within Pf6N2E2_144 at 196.865 kb on - strand, within Pf6N2E2_144 at 196.929 kb on + strand, within Pf6N2E2_144 at 196.929 kb on + strand, within Pf6N2E2_144 at 196.929 kb on + strand, within Pf6N2E2_144 at 196.929 kb on + strand, within Pf6N2E2_144 at 196.929 kb on + strand, within Pf6N2E2_144 at 196.929 kb on + strand, within Pf6N2E2_144 at 196.929 kb on + strand, within Pf6N2E2_144 at 196.930 kb on - strand, within Pf6N2E2_144 at 196.930 kb on - strand, within Pf6N2E2_144 at 196.930 kb on - strand, within Pf6N2E2_144 at 196.930 kb on - strand, within Pf6N2E2_144 at 196.930 kb on - strand, within Pf6N2E2_144 at 196.930 kb on - strand, within Pf6N2E2_144 at 196.930 kb on - strand, within Pf6N2E2_144 at 196.930 kb on - strand, within Pf6N2E2_144 at 196.954 kb on - strand, within Pf6N2E2_144 at 196.959 kb on + strand, within Pf6N2E2_144 at 196.959 kb on + strand, within Pf6N2E2_144 at 196.960 kb on - strand, within Pf6N2E2_144 at 196.960 kb on - strand, within Pf6N2E2_144 at 196.960 kb on - strand, within Pf6N2E2_144 at 197.015 kb on + strand at 197.015 kb on + strand at 197.016 kb on - strand at 197.016 kb on - strand at 197.181 kb on + strand at 197.182 kb on - strand at 197.182 kb on - strand at 197.376 kb on + strand at 197.822 kb on + strand, within Pf6N2E2_145 at 197.823 kb on - strand, within Pf6N2E2_145 at 197.823 kb on - strand, within Pf6N2E2_145
Per-strain Table
Position Strand Gene LocusTag Fraction selenate 0.5 M remove 194,574 + +0.3 194,574 + +1.1 194,575 - +0.3 194,575 - +0.8 194,575 - -2.5 194,641 + +2.9 194,641 + +2.3 194,641 + -0.8 194,642 - +0.2 194,670 + +1.1 194,671 - -1.3 194,677 + -0.4 194,757 + -0.8 194,757 + +0.8 194,757 + -0.2 194,758 - -0.0 194,773 + -2.3 194,801 - Pf6N2E2_143 0.12 -0.4 194,801 - Pf6N2E2_143 0.12 -1.0 194,801 - Pf6N2E2_143 0.12 +0.6 194,801 - Pf6N2E2_143 0.12 +0.3 194,833 + Pf6N2E2_143 0.17 -0.6 194,833 + Pf6N2E2_143 0.17 +1.3 194,834 - Pf6N2E2_143 0.17 +0.3 194,834 - Pf6N2E2_143 0.17 +0.2 194,834 - Pf6N2E2_143 0.17 -0.5 194,834 - Pf6N2E2_143 0.17 +1.9 195,074 - Pf6N2E2_143 0.54 -0.2 195,074 - Pf6N2E2_143 0.54 -0.4 195,119 + Pf6N2E2_143 0.61 +0.3 195,119 + Pf6N2E2_143 0.61 +0.2 195,119 + Pf6N2E2_143 0.61 +0.7 195,119 + Pf6N2E2_143 0.61 -0.5 195,119 + Pf6N2E2_143 0.61 +0.1 195,120 - Pf6N2E2_143 0.61 -0.3 195,120 - Pf6N2E2_143 0.61 +1.0 195,120 - Pf6N2E2_143 0.61 -0.9 195,192 + Pf6N2E2_143 0.72 +1.1 195,192 + Pf6N2E2_143 0.72 +0.0 195,192 + Pf6N2E2_143 0.72 +1.8 195,192 + Pf6N2E2_143 0.72 +0.4 195,192 + Pf6N2E2_143 0.72 +0.2 195,192 + Pf6N2E2_143 0.72 -0.9 195,193 - Pf6N2E2_143 0.72 +1.5 195,193 - Pf6N2E2_143 0.72 +0.7 195,193 - Pf6N2E2_143 0.72 -1.7 195,254 - Pf6N2E2_143 0.82 +0.3 195,254 - Pf6N2E2_143 0.82 -1.5 195,254 - Pf6N2E2_143 0.82 -1.0 195,254 - Pf6N2E2_143 0.82 +0.3 195,265 + Pf6N2E2_143 0.83 -0.1 195,266 - Pf6N2E2_143 0.84 +1.6 195,268 - Pf6N2E2_143 0.84 +0.5 195,281 - Pf6N2E2_143 0.86 +1.0 195,371 - +1.3 195,414 + +0.1 195,520 + -3.4 195,520 + -3.2 195,521 - -1.8 195,521 - -1.7 195,559 + -1.5 195,559 + -1.6 195,559 + -1.6 195,559 + -3.1 195,559 + -1.2 195,559 + -2.1 195,559 + -3.2 195,559 + -2.9 195,560 - -1.8 195,560 - -3.2 195,560 - -2.1 195,560 - -2.1 195,560 - -1.0 195,560 - -3.1 195,560 - -2.7 195,560 - -0.9 195,560 - +0.3 195,560 - -3.8 195,560 - -4.3 195,560 - -2.9 195,560 - -1.0 195,567 + -3.1 195,567 + -1.4 195,567 + -2.5 195,567 + -0.8 195,567 + -2.1 195,567 + -1.6 195,567 + +0.3 195,567 + -2.4 195,567 + -1.9 195,567 + -1.4 195,567 + -3.9 195,568 - -3.5 195,568 - -2.4 195,568 - -1.0 195,568 - -3.3 195,568 - -2.4 195,569 + -1.8 195,570 - -1.6 195,570 - -2.2 195,664 - Pf6N2E2_144 0.12 -1.8 195,666 + Pf6N2E2_144 0.12 -1.4 195,666 + -1.3 195,982 - Pf6N2E2_144 0.31 -0.0 195,999 + Pf6N2E2_144 0.32 -3.3 195,999 + -0.7 195,999 + Pf6N2E2_144 0.32 -2.4 196,000 - Pf6N2E2_144 0.32 -1.0 196,089 + Pf6N2E2_144 0.37 -1.7 196,090 - Pf6N2E2_144 0.37 -3.6 196,090 - Pf6N2E2_144 0.37 -1.6 196,141 - Pf6N2E2_144 0.40 -4.2 196,326 + Pf6N2E2_144 0.51 -2.8 196,326 + Pf6N2E2_144 0.51 -3.0 196,326 + +1.3 196,327 - Pf6N2E2_144 0.51 -2.6 196,327 - Pf6N2E2_144 0.51 -1.7 196,377 + Pf6N2E2_144 0.54 -2.0 196,378 - Pf6N2E2_144 0.54 -2.4 196,414 + Pf6N2E2_144 0.56 -1.5 196,414 + Pf6N2E2_144 0.56 -3.2 196,414 + Pf6N2E2_144 0.56 -3.5 196,414 + Pf6N2E2_144 0.56 -2.0 196,414 + Pf6N2E2_144 0.56 -1.2 196,414 + Pf6N2E2_144 0.56 -2.8 196,414 + Pf6N2E2_144 0.56 -0.9 196,414 + Pf6N2E2_144 0.56 -3.7 196,414 + Pf6N2E2_144 0.56 -1.9 196,414 + Pf6N2E2_144 0.56 -3.0 196,414 + Pf6N2E2_144 0.56 -3.2 196,414 + Pf6N2E2_144 0.56 -1.8 196,415 - Pf6N2E2_144 0.56 -1.8 196,415 - Pf6N2E2_144 0.56 -2.1 196,415 - Pf6N2E2_144 0.56 -2.6 196,415 - Pf6N2E2_144 0.56 -1.8 196,415 - Pf6N2E2_144 0.56 -2.8 196,415 - Pf6N2E2_144 0.56 -2.6 196,415 - Pf6N2E2_144 0.56 -2.3 196,415 - Pf6N2E2_144 0.56 -1.7 196,415 - Pf6N2E2_144 0.56 -1.8 196,415 - Pf6N2E2_144 0.56 -3.6 196,437 + Pf6N2E2_144 0.57 -0.3 196,437 + Pf6N2E2_144 0.57 -2.0 196,437 + Pf6N2E2_144 0.57 -1.0 196,437 + Pf6N2E2_144 0.57 -2.0 196,437 + Pf6N2E2_144 0.57 -0.3 196,438 - Pf6N2E2_144 0.57 -2.3 196,438 - Pf6N2E2_144 0.57 -1.4 196,438 - Pf6N2E2_144 0.57 -4.3 196,438 - Pf6N2E2_144 0.57 -1.6 196,438 - Pf6N2E2_144 0.57 -1.1 196,557 + Pf6N2E2_144 0.64 -2.0 196,611 + Pf6N2E2_144 0.68 -1.3 196,611 + Pf6N2E2_144 0.68 -1.5 196,611 + Pf6N2E2_144 0.68 -1.3 196,612 - Pf6N2E2_144 0.68 -1.4 196,612 - Pf6N2E2_144 0.68 -3.3 196,612 - Pf6N2E2_144 0.68 -3.0 196,617 + Pf6N2E2_144 0.68 -0.7 196,617 + Pf6N2E2_144 0.68 -0.6 196,617 + Pf6N2E2_144 0.68 -2.5 196,617 + Pf6N2E2_144 0.68 -1.0 196,617 + Pf6N2E2_144 0.68 -3.0 196,618 - Pf6N2E2_144 0.68 -2.7 196,618 - Pf6N2E2_144 0.68 -1.8 196,717 + Pf6N2E2_144 0.74 -3.0 196,717 + Pf6N2E2_144 0.74 -2.0 196,717 + Pf6N2E2_144 0.74 -2.3 196,718 - Pf6N2E2_144 0.74 -3.3 196,719 + Pf6N2E2_144 0.74 -2.0 196,719 + Pf6N2E2_144 0.74 -2.1 196,720 - Pf6N2E2_144 0.74 -1.1 196,720 - Pf6N2E2_144 0.74 -1.2 196,865 - Pf6N2E2_144 0.82 -2.6 196,865 - Pf6N2E2_144 0.82 -1.7 196,929 + Pf6N2E2_144 0.86 -4.7 196,929 + Pf6N2E2_144 0.86 -1.5 196,929 + Pf6N2E2_144 0.86 -3.3 196,929 + Pf6N2E2_144 0.86 -3.0 196,929 + Pf6N2E2_144 0.86 -1.7 196,929 + Pf6N2E2_144 0.86 -2.3 196,929 + Pf6N2E2_144 0.86 -2.5 196,930 - Pf6N2E2_144 0.86 -2.6 196,930 - Pf6N2E2_144 0.86 -2.3 196,930 - Pf6N2E2_144 0.86 -2.3 196,930 - Pf6N2E2_144 0.86 -3.3 196,930 - Pf6N2E2_144 0.86 -2.8 196,930 - Pf6N2E2_144 0.86 -1.0 196,930 - Pf6N2E2_144 0.86 -2.3 196,930 - Pf6N2E2_144 0.86 -2.7 196,954 - Pf6N2E2_144 0.88 -2.2 196,959 + Pf6N2E2_144 0.88 -0.5 196,959 + Pf6N2E2_144 0.88 -2.4 196,960 - Pf6N2E2_144 0.88 -0.7 196,960 - Pf6N2E2_144 0.88 -3.1 196,960 - Pf6N2E2_144 0.88 -1.4 197,015 + -4.1 197,015 + -4.0 197,016 - -2.3 197,016 - -1.7 197,181 + +0.2 197,182 - +1.3 197,182 - -0.9 197,376 + -3.5 197,822 + Pf6N2E2_145 0.17 -2.5 197,823 - Pf6N2E2_145 0.18 -2.3 197,823 - Pf6N2E2_145 0.18 -3.9
Or see this region's nucleotide sequence