Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27160

Experiment: D-Salicin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS27150 and BWI76_RS27155 are separated by 3 nucleotidesBWI76_RS27155 and BWI76_RS27160 are separated by 535 nucleotidesBWI76_RS27160 and BWI76_RS27165 are separated by 127 nucleotides BWI76_RS27150: BWI76_RS27150 - secretion protein HlyD, at 5,635,965 to 5,637,101 _RS27150 BWI76_RS27155: BWI76_RS27155 - hypothetical protein, at 5,637,105 to 5,637,476 _RS27155 BWI76_RS27160: BWI76_RS27160 - PTS mannitol transporter subunit IICBA, at 5,638,012 to 5,639,922 _RS27160 BWI76_RS27165: BWI76_RS27165 - mannitol-1-phosphate 5-dehydrogenase, at 5,640,050 to 5,641,198 _RS27165 Position (kb) 5638 5639 5640Strain fitness (log2 ratio) -2 -1 0 1 2 3at 5637.017 kb on - strandat 5637.017 kb on - strandat 5637.022 kb on - strandat 5637.078 kb on + strandat 5637.078 kb on + strandat 5637.081 kb on - strandat 5637.086 kb on - strandat 5637.086 kb on - strandat 5637.114 kb on + strandat 5637.114 kb on + strandat 5637.118 kb on + strandat 5637.123 kb on + strandat 5637.123 kb on + strandat 5637.123 kb on + strandat 5637.123 kb on + strandat 5637.123 kb on + strandat 5637.123 kb on + strandat 5637.123 kb on + strandat 5637.123 kb on + strandat 5637.123 kb on + strandat 5637.124 kb on + strandat 5637.124 kb on + strandat 5637.131 kb on - strandat 5637.131 kb on - strandat 5637.131 kb on - strandat 5637.131 kb on - strandat 5637.131 kb on - strandat 5637.131 kb on - strandat 5637.131 kb on - strandat 5637.131 kb on - strandat 5637.131 kb on - strandat 5637.131 kb on - strandat 5637.131 kb on - strandat 5637.133 kb on + strandat 5637.137 kb on + strandat 5637.137 kb on + strandat 5637.137 kb on + strandat 5637.137 kb on + strandat 5637.137 kb on + strandat 5637.137 kb on + strandat 5637.137 kb on + strandat 5637.137 kb on + strandat 5637.137 kb on + strandat 5637.137 kb on + strandat 5637.143 kb on + strand, within BWI76_RS27155at 5637.145 kb on - strand, within BWI76_RS27155at 5637.145 kb on - strand, within BWI76_RS27155at 5637.145 kb on - strand, within BWI76_RS27155at 5637.145 kb on - strand, within BWI76_RS27155at 5637.145 kb on - strand, within BWI76_RS27155at 5637.145 kb on - strand, within BWI76_RS27155at 5637.145 kb on - strand, within BWI76_RS27155at 5637.145 kb on - strand, within BWI76_RS27155at 5637.145 kb on - strand, within BWI76_RS27155at 5637.148 kb on + strand, within BWI76_RS27155at 5637.148 kb on + strand, within BWI76_RS27155at 5637.156 kb on - strand, within BWI76_RS27155at 5637.156 kb on - strand, within BWI76_RS27155at 5637.156 kb on - strand, within BWI76_RS27155at 5637.156 kb on - strand, within BWI76_RS27155at 5637.156 kb on - strand, within BWI76_RS27155at 5637.158 kb on + strand, within BWI76_RS27155at 5637.175 kb on - strand, within BWI76_RS27155at 5637.179 kb on + strand, within BWI76_RS27155at 5637.187 kb on - strand, within BWI76_RS27155at 5637.198 kb on + strand, within BWI76_RS27155at 5637.201 kb on + strand, within BWI76_RS27155at 5637.203 kb on + strand, within BWI76_RS27155at 5637.211 kb on - strand, within BWI76_RS27155at 5637.214 kb on + strand, within BWI76_RS27155at 5637.215 kb on + strand, within BWI76_RS27155at 5637.222 kb on - strand, within BWI76_RS27155at 5637.226 kb on + strand, within BWI76_RS27155at 5637.234 kb on - strand, within BWI76_RS27155at 5637.237 kb on + strand, within BWI76_RS27155at 5637.238 kb on - strand, within BWI76_RS27155at 5637.250 kb on + strand, within BWI76_RS27155at 5637.250 kb on + strand, within BWI76_RS27155at 5637.255 kb on + strand, within BWI76_RS27155at 5637.269 kb on + strand, within BWI76_RS27155at 5637.280 kb on + strand, within BWI76_RS27155at 5637.280 kb on + strand, within BWI76_RS27155at 5637.282 kb on - strand, within BWI76_RS27155at 5637.283 kb on - strand, within BWI76_RS27155at 5637.297 kb on + strand, within BWI76_RS27155at 5637.314 kb on + strand, within BWI76_RS27155at 5637.322 kb on - strand, within BWI76_RS27155at 5637.322 kb on - strand, within BWI76_RS27155at 5637.325 kb on - strand, within BWI76_RS27155at 5637.325 kb on - strand, within BWI76_RS27155at 5637.327 kb on + strand, within BWI76_RS27155at 5637.327 kb on + strand, within BWI76_RS27155at 5637.327 kb on + strand, within BWI76_RS27155at 5637.327 kb on + strand, within BWI76_RS27155at 5637.327 kb on + strand, within BWI76_RS27155at 5637.335 kb on - strand, within BWI76_RS27155at 5637.335 kb on - strand, within BWI76_RS27155at 5637.335 kb on - strand, within BWI76_RS27155at 5637.335 kb on - strand, within BWI76_RS27155at 5637.335 kb on - strand, within BWI76_RS27155at 5637.335 kb on - strand, within BWI76_RS27155at 5637.335 kb on - strand, within BWI76_RS27155at 5637.355 kb on + strand, within BWI76_RS27155at 5637.363 kb on - strand, within BWI76_RS27155at 5637.369 kb on - strand, within BWI76_RS27155at 5637.370 kb on - strand, within BWI76_RS27155at 5637.379 kb on + strandat 5637.386 kb on + strand, within BWI76_RS27155at 5637.386 kb on + strand, within BWI76_RS27155at 5637.386 kb on + strand, within BWI76_RS27155at 5637.386 kb on + strand, within BWI76_RS27155at 5637.387 kb on + strand, within BWI76_RS27155at 5637.394 kb on - strand, within BWI76_RS27155at 5637.394 kb on - strand, within BWI76_RS27155at 5637.394 kb on - strand, within BWI76_RS27155at 5637.394 kb on - strand, within BWI76_RS27155at 5637.394 kb on - strand, within BWI76_RS27155at 5637.394 kb on - strand, within BWI76_RS27155at 5637.394 kb on - strand, within BWI76_RS27155at 5637.394 kb on - strand, within BWI76_RS27155at 5637.394 kb on - strand, within BWI76_RS27155at 5637.441 kb on + strandat 5637.449 kb on - strandat 5637.449 kb on - strandat 5637.481 kb on - strandat 5637.487 kb on + strandat 5637.522 kb on - strandat 5637.561 kb on - strandat 5637.592 kb on - strandat 5637.592 kb on - strandat 5637.592 kb on - strandat 5637.592 kb on - strandat 5637.592 kb on - strandat 5637.600 kb on + strandat 5637.601 kb on - strandat 5637.601 kb on - strandat 5637.605 kb on + strandat 5637.605 kb on + strandat 5637.612 kb on + strandat 5637.612 kb on + strandat 5637.615 kb on + strandat 5637.615 kb on + strandat 5637.620 kb on - strandat 5637.621 kb on + strandat 5637.632 kb on + strandat 5637.635 kb on - strandat 5637.640 kb on + strandat 5637.640 kb on + strandat 5637.640 kb on + strandat 5637.640 kb on + strandat 5637.640 kb on + strandat 5637.640 kb on - strandat 5637.641 kb on + strandat 5637.641 kb on + strandat 5637.641 kb on + strandat 5637.641 kb on + strandat 5637.641 kb on + strandat 5637.641 kb on + strandat 5637.641 kb on + strandat 5637.642 kb on + strandat 5637.642 kb on + strandat 5637.643 kb on - strandat 5637.646 kb on + strandat 5637.648 kb on - strandat 5637.649 kb on - strandat 5637.649 kb on - strandat 5637.649 kb on - strandat 5637.649 kb on - strandat 5637.649 kb on - strandat 5637.649 kb on - strandat 5637.649 kb on - strandat 5637.649 kb on - strandat 5637.649 kb on - strandat 5637.649 kb on - strandat 5637.649 kb on - strandat 5637.649 kb on - strandat 5637.656 kb on + strandat 5637.656 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.667 kb on + strandat 5637.675 kb on - strandat 5637.675 kb on - strandat 5637.675 kb on - strandat 5637.675 kb on - strandat 5637.675 kb on - strandat 5637.675 kb on - strandat 5637.675 kb on - strandat 5637.675 kb on - strandat 5637.675 kb on - strandat 5637.675 kb on - strandat 5637.675 kb on - strandat 5637.675 kb on - strandat 5637.675 kb on - strandat 5637.675 kb on - strandat 5637.675 kb on - strandat 5637.676 kb on - strandat 5637.770 kb on + strandat 5637.848 kb on - strandat 5637.853 kb on - strandat 5637.858 kb on - strandat 5637.868 kb on - strandat 5637.881 kb on + strandat 5637.890 kb on - strandat 5637.902 kb on + strandat 5637.910 kb on - strandat 5637.927 kb on + strandat 5637.927 kb on + strandat 5637.927 kb on + strandat 5637.935 kb on - strandat 5637.961 kb on + strandat 5638.024 kb on - strandat 5638.036 kb on + strandat 5638.051 kb on - strandat 5638.069 kb on - strandat 5638.069 kb on - strandat 5638.114 kb on + strandat 5638.144 kb on + strandat 5638.155 kb on + strandat 5638.174 kb on + strandat 5638.189 kb on - strandat 5638.197 kb on + strandat 5638.324 kb on - strand, within BWI76_RS27160at 5638.374 kb on + strand, within BWI76_RS27160at 5638.465 kb on - strand, within BWI76_RS27160at 5638.465 kb on - strand, within BWI76_RS27160at 5638.519 kb on + strand, within BWI76_RS27160at 5638.700 kb on + strand, within BWI76_RS27160at 5638.724 kb on + strand, within BWI76_RS27160at 5638.879 kb on + strand, within BWI76_RS27160at 5638.887 kb on - strand, within BWI76_RS27160at 5639.292 kb on + strand, within BWI76_RS27160at 5639.421 kb on + strand, within BWI76_RS27160at 5639.483 kb on + strand, within BWI76_RS27160at 5639.491 kb on - strand, within BWI76_RS27160at 5639.585 kb on - strand, within BWI76_RS27160at 5639.617 kb on + strandat 5639.625 kb on - strand, within BWI76_RS27160at 5639.661 kb on - strand, within BWI76_RS27160at 5639.666 kb on - strand, within BWI76_RS27160at 5639.899 kb on + strandat 5639.899 kb on + strandat 5639.958 kb on + strandat 5639.978 kb on - strandat 5639.983 kb on + strandat 5639.984 kb on + strandat 5639.990 kb on - strandat 5639.994 kb on + strandat 5640.014 kb on - strandat 5640.225 kb on - strand, within BWI76_RS27165at 5640.335 kb on + strand, within BWI76_RS27165at 5640.444 kb on - strand, within BWI76_RS27165at 5640.523 kb on - strand, within BWI76_RS27165at 5640.613 kb on + strand, within BWI76_RS27165at 5640.621 kb on - strand, within BWI76_RS27165at 5640.621 kb on - strand, within BWI76_RS27165at 5640.621 kb on - strand, within BWI76_RS27165at 5640.686 kb on + strand, within BWI76_RS27165

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
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5,637,017 - +0.7
5,637,017 - +1.2
5,637,022 - -0.4
5,637,078 + +0.0
5,637,078 + -0.0
5,637,081 - -0.5
5,637,086 - +0.0
5,637,086 - -0.6
5,637,114 + +0.1
5,637,114 + -0.3
5,637,118 + -0.2
5,637,123 + +0.1
5,637,123 + -0.1
5,637,123 + -1.7
5,637,123 + +2.3
5,637,123 + -0.1
5,637,123 + -1.9
5,637,123 + +0.7
5,637,123 + -0.6
5,637,123 + -0.1
5,637,124 + -0.2
5,637,124 + -0.3
5,637,131 - +0.3
5,637,131 - -0.5
5,637,131 - -0.4
5,637,131 - -0.1
5,637,131 - +0.3
5,637,131 - -0.5
5,637,131 - -0.7
5,637,131 - +0.4
5,637,131 - -1.7
5,637,131 - -0.2
5,637,131 - -0.4
5,637,133 + +1.6
5,637,137 + +0.0
5,637,137 + +0.5
5,637,137 + -1.5
5,637,137 + +0.0
5,637,137 + +0.5
5,637,137 + +0.5
5,637,137 + +0.6
5,637,137 + -0.5
5,637,137 + +0.1
5,637,137 + +2.6
5,637,143 + BWI76_RS27155 0.10 -0.6
5,637,145 - BWI76_RS27155 0.11 +0.2
5,637,145 - BWI76_RS27155 0.11 +0.2
5,637,145 - BWI76_RS27155 0.11 +1.2
5,637,145 - BWI76_RS27155 0.11 +0.2
5,637,145 - BWI76_RS27155 0.11 +0.5
5,637,145 - BWI76_RS27155 0.11 -0.7
5,637,145 - BWI76_RS27155 0.11 +0.0
5,637,145 - BWI76_RS27155 0.11 +0.4
5,637,145 - BWI76_RS27155 0.11 +0.0
5,637,148 + BWI76_RS27155 0.12 +0.6
5,637,148 + BWI76_RS27155 0.12 -0.2
5,637,156 - BWI76_RS27155 0.14 +1.6
5,637,156 - BWI76_RS27155 0.14 -0.2
5,637,156 - BWI76_RS27155 0.14 -0.1
5,637,156 - BWI76_RS27155 0.14 -1.4
5,637,156 - BWI76_RS27155 0.14 +0.7
5,637,158 + BWI76_RS27155 0.14 -0.6
5,637,175 - BWI76_RS27155 0.19 -0.6
5,637,179 + BWI76_RS27155 0.20 -0.1
5,637,187 - BWI76_RS27155 0.22 -0.9
5,637,198 + BWI76_RS27155 0.25 +1.1
5,637,201 + BWI76_RS27155 0.26 -1.4
5,637,203 + BWI76_RS27155 0.26 -0.6
5,637,211 - BWI76_RS27155 0.28 -0.1
5,637,214 + BWI76_RS27155 0.29 -1.4
5,637,215 + BWI76_RS27155 0.30 +0.0
5,637,222 - BWI76_RS27155 0.31 -0.2
5,637,226 + BWI76_RS27155 0.33 -0.1
5,637,234 - BWI76_RS27155 0.35 -0.6
5,637,237 + BWI76_RS27155 0.35 +0.3
5,637,238 - BWI76_RS27155 0.36 -0.5
5,637,250 + BWI76_RS27155 0.39 -0.1
5,637,250 + BWI76_RS27155 0.39 +0.3
5,637,255 + BWI76_RS27155 0.40 -0.3
5,637,269 + BWI76_RS27155 0.44 -2.4
5,637,280 + BWI76_RS27155 0.47 -0.5
5,637,280 + BWI76_RS27155 0.47 +0.7
5,637,282 - BWI76_RS27155 0.48 +0.8
5,637,283 - BWI76_RS27155 0.48 +0.1
5,637,297 + BWI76_RS27155 0.52 -0.2
5,637,314 + BWI76_RS27155 0.56 -0.2
5,637,322 - BWI76_RS27155 0.58 +0.1
5,637,322 - BWI76_RS27155 0.58 -0.3
5,637,325 - BWI76_RS27155 0.59 -0.5
5,637,325 - BWI76_RS27155 0.59 -0.0
5,637,327 + BWI76_RS27155 0.60 +0.4
5,637,327 + BWI76_RS27155 0.60 -0.7
5,637,327 + BWI76_RS27155 0.60 -1.7
5,637,327 + BWI76_RS27155 0.60 +0.0
5,637,327 + BWI76_RS27155 0.60 -1.3
5,637,335 - BWI76_RS27155 0.62 +0.4
5,637,335 - BWI76_RS27155 0.62 -0.3
5,637,335 - BWI76_RS27155 0.62 -0.8
5,637,335 - BWI76_RS27155 0.62 -0.1
5,637,335 - BWI76_RS27155 0.62 -0.1
5,637,335 - BWI76_RS27155 0.62 +0.3
5,637,335 - BWI76_RS27155 0.62 +0.3
5,637,355 + BWI76_RS27155 0.67 +0.5
5,637,363 - BWI76_RS27155 0.69 -0.3
5,637,369 - BWI76_RS27155 0.71 +0.6
5,637,370 - BWI76_RS27155 0.71 +0.3
5,637,379 + +0.8
5,637,386 + BWI76_RS27155 0.76 +0.6
5,637,386 + BWI76_RS27155 0.76 -0.1
5,637,386 + BWI76_RS27155 0.76 +1.6
5,637,386 + BWI76_RS27155 0.76 +0.9
5,637,387 + BWI76_RS27155 0.76 -0.3
5,637,394 - BWI76_RS27155 0.78 +0.6
5,637,394 - BWI76_RS27155 0.78 +1.4
5,637,394 - BWI76_RS27155 0.78 +0.3
5,637,394 - BWI76_RS27155 0.78 -1.4
5,637,394 - BWI76_RS27155 0.78 +0.0
5,637,394 - BWI76_RS27155 0.78 -1.0
5,637,394 - BWI76_RS27155 0.78 +0.7
5,637,394 - BWI76_RS27155 0.78 -0.1
5,637,394 - BWI76_RS27155 0.78 +2.9
5,637,441 + -0.2
5,637,449 - +0.8
5,637,449 - +0.4
5,637,481 - -0.2
5,637,487 + -0.1
5,637,522 - +0.1
5,637,561 - +0.6
5,637,592 - -0.1
5,637,592 - +0.3
5,637,592 - +0.1
5,637,592 - +0.1
5,637,592 - -0.7
5,637,600 + +0.3
5,637,601 - +0.1
5,637,601 - -0.0
5,637,605 + +0.4
5,637,605 + -0.9
5,637,612 + +0.6
5,637,612 + +1.1
5,637,615 + +0.1
5,637,615 + -0.5
5,637,620 - -0.9
5,637,621 + -0.2
5,637,632 + +0.0
5,637,635 - +0.2
5,637,640 + -1.3
5,637,640 + -0.7
5,637,640 + +1.0
5,637,640 + -0.1
5,637,640 + -0.7
5,637,640 - -0.2
5,637,641 + -0.7
5,637,641 + +0.4
5,637,641 + +1.1
5,637,641 + +0.1
5,637,641 + +1.3
5,637,641 + +0.0
5,637,641 + +0.3
5,637,642 + +1.9
5,637,642 + -0.2
5,637,643 - +1.2
5,637,646 + +0.7
5,637,648 - -0.5
5,637,649 - +0.4
5,637,649 - +1.0
5,637,649 - +0.3
5,637,649 - +0.7
5,637,649 - +0.0
5,637,649 - +0.5
5,637,649 - -1.6
5,637,649 - +1.6
5,637,649 - +0.0
5,637,649 - +0.0
5,637,649 - -0.0
5,637,649 - -0.4
5,637,656 + -1.1
5,637,656 + -2.0
5,637,667 + +0.3
5,637,667 + -0.2
5,637,667 + +0.4
5,637,667 + +1.0
5,637,667 + +0.4
5,637,667 + -0.7
5,637,667 + +0.0
5,637,667 + +0.2
5,637,667 + +0.0
5,637,667 + -0.6
5,637,667 + +1.0
5,637,667 + -1.4
5,637,667 + +0.0
5,637,667 + -0.2
5,637,667 + -0.3
5,637,667 + +0.2
5,637,667 + -0.3
5,637,667 + -1.2
5,637,667 + +1.2
5,637,667 + -0.9
5,637,667 + -1.4
5,637,667 + +0.4
5,637,667 + +0.5
5,637,667 + +0.1
5,637,667 + +0.5
5,637,667 + -0.1
5,637,667 + -0.1
5,637,675 - -0.2
5,637,675 - +3.4
5,637,675 - -2.0
5,637,675 - +0.1
5,637,675 - -0.3
5,637,675 - +0.1
5,637,675 - -0.3
5,637,675 - +0.3
5,637,675 - +2.6
5,637,675 - +0.0
5,637,675 - -0.7
5,637,675 - +0.4
5,637,675 - +0.8
5,637,675 - +1.3
5,637,675 - -0.0
5,637,676 - +0.4
5,637,770 + +0.1
5,637,848 - +0.8
5,637,853 - +0.4
5,637,858 - +0.0
5,637,868 - +0.6
5,637,881 + +0.0
5,637,890 - -2.6
5,637,902 + +0.3
5,637,910 - +0.5
5,637,927 + -0.3
5,637,927 + -0.0
5,637,927 + +0.6
5,637,935 - +0.9
5,637,961 + -0.2
5,638,024 - +0.6
5,638,036 + +2.0
5,638,051 - +0.0
5,638,069 - +0.1
5,638,069 - +0.4
5,638,114 + -0.1
5,638,144 + -0.7
5,638,155 + +2.0
5,638,174 + -0.3
5,638,189 - +0.5
5,638,197 + +0.7
5,638,324 - BWI76_RS27160 0.16 +0.2
5,638,374 + BWI76_RS27160 0.19 +0.9
5,638,465 - BWI76_RS27160 0.24 -0.3
5,638,465 - BWI76_RS27160 0.24 +0.4
5,638,519 + BWI76_RS27160 0.27 +1.0
5,638,700 + BWI76_RS27160 0.36 +0.5
5,638,724 + BWI76_RS27160 0.37 +0.3
5,638,879 + BWI76_RS27160 0.45 +0.8
5,638,887 - BWI76_RS27160 0.46 +1.0
5,639,292 + BWI76_RS27160 0.67 -0.1
5,639,421 + BWI76_RS27160 0.74 +0.9
5,639,483 + BWI76_RS27160 0.77 +1.1
5,639,491 - BWI76_RS27160 0.77 -1.2
5,639,585 - BWI76_RS27160 0.82 -0.5
5,639,617 + +2.6
5,639,625 - BWI76_RS27160 0.84 +3.2
5,639,661 - BWI76_RS27160 0.86 +1.2
5,639,666 - BWI76_RS27160 0.87 +0.1
5,639,899 + -0.4
5,639,899 + +0.4
5,639,958 + +1.6
5,639,978 - -0.0
5,639,983 + +0.1
5,639,984 + +0.4
5,639,990 - -0.5
5,639,994 + -0.1
5,640,014 - +3.2
5,640,225 - BWI76_RS27165 0.15 +0.2
5,640,335 + BWI76_RS27165 0.25 +0.5
5,640,444 - BWI76_RS27165 0.34 +2.1
5,640,523 - BWI76_RS27165 0.41 +1.5
5,640,613 + BWI76_RS27165 0.49 +2.2
5,640,621 - BWI76_RS27165 0.50 +0.6
5,640,621 - BWI76_RS27165 0.50 -0.1
5,640,621 - BWI76_RS27165 0.50 -0.3
5,640,686 + BWI76_RS27165 0.55 +1.6

Or see this region's nucleotide sequence