Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24465

Experiment: D-Salicin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS24460 and BWI76_RS24465 are separated by 23 nucleotidesBWI76_RS24465 and BWI76_RS24470 are separated by 214 nucleotidesBWI76_RS24470 and BWI76_RS24475 are separated by 60 nucleotides BWI76_RS24460: BWI76_RS24460 - bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase, at 5,099,376 to 5,102,210 _RS24460 BWI76_RS24465: BWI76_RS24465 - adenylate cyclase, at 5,102,234 to 5,103,532 _RS24465 BWI76_RS24470: BWI76_RS24470 - hypothetical protein, at 5,103,747 to 5,104,367 _RS24470 BWI76_RS24475: BWI76_RS24475 - multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase, at 5,104,428 to 5,105,669 _RS24475 Position (kb) 5102 5103 5104Strain fitness (log2 ratio) -2 -1 0 1at 5101.472 kb on - strand, within BWI76_RS24460at 5101.566 kb on + strand, within BWI76_RS24460at 5101.612 kb on - strand, within BWI76_RS24460at 5101.815 kb on - strand, within BWI76_RS24460at 5101.862 kb on + strand, within BWI76_RS24460at 5101.862 kb on + strand, within BWI76_RS24460at 5101.862 kb on + strand, within BWI76_RS24460at 5101.870 kb on - strand, within BWI76_RS24460at 5101.870 kb on - strand, within BWI76_RS24460at 5101.870 kb on - strand, within BWI76_RS24460at 5102.171 kb on - strandat 5102.330 kb on + strandat 5102.359 kb on + strandat 5102.444 kb on - strand, within BWI76_RS24465at 5102.514 kb on + strand, within BWI76_RS24465at 5102.925 kb on + strand, within BWI76_RS24465at 5102.996 kb on - strand, within BWI76_RS24465at 5103.013 kb on + strand, within BWI76_RS24465at 5103.021 kb on - strand, within BWI76_RS24465at 5103.264 kb on - strand, within BWI76_RS24465at 5103.303 kb on - strand, within BWI76_RS24465at 5103.347 kb on + strand, within BWI76_RS24465at 5103.365 kb on - strand, within BWI76_RS24465at 5103.370 kb on + strand, within BWI76_RS24465at 5103.370 kb on + strand, within BWI76_RS24465at 5103.378 kb on - strand, within BWI76_RS24465at 5103.378 kb on - strand, within BWI76_RS24465at 5103.395 kb on + strand, within BWI76_RS24465at 5103.446 kb on - strandat 5103.446 kb on - strandat 5103.459 kb on + strandat 5103.481 kb on + strandat 5103.486 kb on + strandat 5103.486 kb on + strandat 5103.489 kb on - strandat 5103.489 kb on - strandat 5103.527 kb on + strandat 5103.548 kb on + strandat 5103.556 kb on - strandat 5103.653 kb on + strandat 5103.783 kb on + strandat 5103.840 kb on + strand, within BWI76_RS24470at 5103.847 kb on + strand, within BWI76_RS24470at 5103.865 kb on - strand, within BWI76_RS24470at 5103.920 kb on + strand, within BWI76_RS24470at 5103.981 kb on - strand, within BWI76_RS24470at 5103.986 kb on - strand, within BWI76_RS24470at 5103.986 kb on - strand, within BWI76_RS24470at 5104.017 kb on - strand, within BWI76_RS24470at 5104.433 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
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5,101,472 - BWI76_RS24460 0.74 +0.1
5,101,566 + BWI76_RS24460 0.77 +0.1
5,101,612 - BWI76_RS24460 0.79 +0.0
5,101,815 - BWI76_RS24460 0.86 +0.0
5,101,862 + BWI76_RS24460 0.88 -0.0
5,101,862 + BWI76_RS24460 0.88 +0.9
5,101,862 + BWI76_RS24460 0.88 +0.2
5,101,870 - BWI76_RS24460 0.88 +0.1
5,101,870 - BWI76_RS24460 0.88 +0.3
5,101,870 - BWI76_RS24460 0.88 +0.4
5,102,171 - -0.4
5,102,330 + -1.4
5,102,359 + -1.2
5,102,444 - BWI76_RS24465 0.16 -0.6
5,102,514 + BWI76_RS24465 0.22 -1.2
5,102,925 + BWI76_RS24465 0.53 -1.4
5,102,996 - BWI76_RS24465 0.59 -0.6
5,103,013 + BWI76_RS24465 0.60 -1.0
5,103,021 - BWI76_RS24465 0.61 -1.3
5,103,264 - BWI76_RS24465 0.79 -0.0
5,103,303 - BWI76_RS24465 0.82 -0.7
5,103,347 + BWI76_RS24465 0.86 -0.5
5,103,365 - BWI76_RS24465 0.87 -1.2
5,103,370 + BWI76_RS24465 0.87 +0.3
5,103,370 + BWI76_RS24465 0.87 -0.9
5,103,378 - BWI76_RS24465 0.88 -0.9
5,103,378 - BWI76_RS24465 0.88 -1.0
5,103,395 + BWI76_RS24465 0.89 -1.0
5,103,446 - -0.7
5,103,446 - -0.8
5,103,459 + -0.2
5,103,481 + -0.2
5,103,486 + -2.0
5,103,486 + -1.1
5,103,489 - -2.7
5,103,489 - +0.1
5,103,527 + -1.6
5,103,548 + -1.2
5,103,556 - -0.3
5,103,653 + +0.4
5,103,783 + +0.7
5,103,840 + BWI76_RS24470 0.15 +1.3
5,103,847 + BWI76_RS24470 0.16 +0.3
5,103,865 - BWI76_RS24470 0.19 +0.2
5,103,920 + BWI76_RS24470 0.28 -0.1
5,103,981 - BWI76_RS24470 0.38 +0.6
5,103,986 - BWI76_RS24470 0.38 +0.4
5,103,986 - BWI76_RS24470 0.38 -0.1
5,104,017 - BWI76_RS24470 0.43 +1.3
5,104,433 + +0.7

Or see this region's nucleotide sequence