Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24460 and BWI76_RS24465 are separated by 23 nucleotides BWI76_RS24465 and BWI76_RS24470 are separated by 214 nucleotides BWI76_RS24470 and BWI76_RS24475 are separated by 60 nucleotides
BWI76_RS24460: BWI76_RS24460 - bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase, at 5,099,376 to 5,102,210
_RS24460
BWI76_RS24465: BWI76_RS24465 - adenylate cyclase, at 5,102,234 to 5,103,532
_RS24465
BWI76_RS24470: BWI76_RS24470 - hypothetical protein, at 5,103,747 to 5,104,367
_RS24470
BWI76_RS24475: BWI76_RS24475 - multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase, at 5,104,428 to 5,105,669
_RS24475
Position (kb) 5102
5103
5104 Strain fitness (log2 ratio) -2
-1
0
1 at 5101.472 kb on - strand, within BWI76_RS24460 at 5101.566 kb on + strand, within BWI76_RS24460 at 5101.612 kb on - strand, within BWI76_RS24460 at 5101.815 kb on - strand, within BWI76_RS24460 at 5101.862 kb on + strand, within BWI76_RS24460 at 5101.862 kb on + strand, within BWI76_RS24460 at 5101.862 kb on + strand, within BWI76_RS24460 at 5101.870 kb on - strand, within BWI76_RS24460 at 5101.870 kb on - strand, within BWI76_RS24460 at 5101.870 kb on - strand, within BWI76_RS24460 at 5102.171 kb on - strand at 5102.330 kb on + strand at 5102.359 kb on + strand at 5102.444 kb on - strand, within BWI76_RS24465 at 5102.514 kb on + strand, within BWI76_RS24465 at 5102.925 kb on + strand, within BWI76_RS24465 at 5102.996 kb on - strand, within BWI76_RS24465 at 5103.013 kb on + strand, within BWI76_RS24465 at 5103.021 kb on - strand, within BWI76_RS24465 at 5103.264 kb on - strand, within BWI76_RS24465 at 5103.303 kb on - strand, within BWI76_RS24465 at 5103.347 kb on + strand, within BWI76_RS24465 at 5103.365 kb on - strand, within BWI76_RS24465 at 5103.370 kb on + strand, within BWI76_RS24465 at 5103.370 kb on + strand, within BWI76_RS24465 at 5103.378 kb on - strand, within BWI76_RS24465 at 5103.378 kb on - strand, within BWI76_RS24465 at 5103.395 kb on + strand, within BWI76_RS24465 at 5103.446 kb on - strand at 5103.446 kb on - strand at 5103.459 kb on + strand at 5103.481 kb on + strand at 5103.486 kb on + strand at 5103.486 kb on + strand at 5103.489 kb on - strand at 5103.489 kb on - strand at 5103.527 kb on + strand at 5103.548 kb on + strand at 5103.556 kb on - strand at 5103.653 kb on + strand at 5103.783 kb on + strand at 5103.840 kb on + strand, within BWI76_RS24470 at 5103.847 kb on + strand, within BWI76_RS24470 at 5103.865 kb on - strand, within BWI76_RS24470 at 5103.920 kb on + strand, within BWI76_RS24470 at 5103.981 kb on - strand, within BWI76_RS24470 at 5103.986 kb on - strand, within BWI76_RS24470 at 5103.986 kb on - strand, within BWI76_RS24470 at 5104.017 kb on - strand, within BWI76_RS24470 at 5104.433 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 5,101,472 - BWI76_RS24460 0.74 +0.1 5,101,566 + BWI76_RS24460 0.77 +0.1 5,101,612 - BWI76_RS24460 0.79 +0.0 5,101,815 - BWI76_RS24460 0.86 +0.0 5,101,862 + BWI76_RS24460 0.88 -0.0 5,101,862 + BWI76_RS24460 0.88 +0.9 5,101,862 + BWI76_RS24460 0.88 +0.2 5,101,870 - BWI76_RS24460 0.88 +0.1 5,101,870 - BWI76_RS24460 0.88 +0.3 5,101,870 - BWI76_RS24460 0.88 +0.4 5,102,171 - -0.4 5,102,330 + -1.4 5,102,359 + -1.2 5,102,444 - BWI76_RS24465 0.16 -0.6 5,102,514 + BWI76_RS24465 0.22 -1.2 5,102,925 + BWI76_RS24465 0.53 -1.4 5,102,996 - BWI76_RS24465 0.59 -0.6 5,103,013 + BWI76_RS24465 0.60 -1.0 5,103,021 - BWI76_RS24465 0.61 -1.3 5,103,264 - BWI76_RS24465 0.79 -0.0 5,103,303 - BWI76_RS24465 0.82 -0.7 5,103,347 + BWI76_RS24465 0.86 -0.5 5,103,365 - BWI76_RS24465 0.87 -1.2 5,103,370 + BWI76_RS24465 0.87 +0.3 5,103,370 + BWI76_RS24465 0.87 -0.9 5,103,378 - BWI76_RS24465 0.88 -0.9 5,103,378 - BWI76_RS24465 0.88 -1.0 5,103,395 + BWI76_RS24465 0.89 -1.0 5,103,446 - -0.7 5,103,446 - -0.8 5,103,459 + -0.2 5,103,481 + -0.2 5,103,486 + -2.0 5,103,486 + -1.1 5,103,489 - -2.7 5,103,489 - +0.1 5,103,527 + -1.6 5,103,548 + -1.2 5,103,556 - -0.3 5,103,653 + +0.4 5,103,783 + +0.7 5,103,840 + BWI76_RS24470 0.15 +1.3 5,103,847 + BWI76_RS24470 0.16 +0.3 5,103,865 - BWI76_RS24470 0.19 +0.2 5,103,920 + BWI76_RS24470 0.28 -0.1 5,103,981 - BWI76_RS24470 0.38 +0.6 5,103,986 - BWI76_RS24470 0.38 +0.4 5,103,986 - BWI76_RS24470 0.38 -0.1 5,104,017 - BWI76_RS24470 0.43 +1.3 5,104,433 + +0.7
Or see this region's nucleotide sequence