Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22695

Experiment: D-Salicin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS22685 and BWI76_RS22690 are separated by 53 nucleotidesBWI76_RS22690 and BWI76_RS22695 overlap by 1 nucleotidesBWI76_RS22695 and BWI76_RS22700 are separated by 9 nucleotidesBWI76_RS22700 and BWI76_RS22705 are separated by 9 nucleotides BWI76_RS22685: BWI76_RS22685 - hypothetical protein, at 4,726,569 to 4,726,895 _RS22685 BWI76_RS22690: BWI76_RS22690 - adenylyl-sulfate kinase, at 4,726,949 to 4,727,554 _RS22690 BWI76_RS22695: BWI76_RS22695 - sulfate adenylyltransferase, at 4,727,554 to 4,728,981 _RS22695 BWI76_RS22700: BWI76_RS22700 - sulfate adenylyltransferase subunit 2, at 4,728,991 to 4,729,899 _RS22700 BWI76_RS22705: BWI76_RS22705 - siroheme synthase, at 4,729,909 to 4,731,324 _RS22705 Position (kb) 4727 4728 4729Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4726.585 kb on + strandat 4726.723 kb on + strand, within BWI76_RS22685at 4726.723 kb on + strand, within BWI76_RS22685at 4726.730 kb on - strand, within BWI76_RS22685at 4726.731 kb on - strand, within BWI76_RS22685at 4726.731 kb on - strand, within BWI76_RS22685at 4726.731 kb on - strand, within BWI76_RS22685at 4726.731 kb on - strand, within BWI76_RS22685at 4726.753 kb on + strand, within BWI76_RS22685at 4726.776 kb on - strand, within BWI76_RS22685at 4726.817 kb on + strand, within BWI76_RS22685at 4726.909 kb on + strandat 4726.964 kb on - strandat 4726.980 kb on - strandat 4726.980 kb on - strandat 4727.091 kb on + strand, within BWI76_RS22690at 4727.106 kb on + strand, within BWI76_RS22690at 4727.212 kb on + strand, within BWI76_RS22690at 4727.279 kb on - strand, within BWI76_RS22690at 4727.339 kb on + strand, within BWI76_RS22690at 4727.508 kb on - strandat 4727.638 kb on + strandat 4727.638 kb on + strandat 4727.638 kb on + strandat 4727.638 kb on + strandat 4727.638 kb on + strandat 4727.643 kb on + strandat 4727.646 kb on - strandat 4727.646 kb on - strandat 4727.646 kb on - strandat 4727.697 kb on + strand, within BWI76_RS22695at 4728.156 kb on + strandat 4728.156 kb on + strand, within BWI76_RS22695at 4728.164 kb on - strand, within BWI76_RS22695at 4728.164 kb on - strand, within BWI76_RS22695at 4728.413 kb on - strand, within BWI76_RS22695at 4728.620 kb on - strand, within BWI76_RS22695at 4728.766 kb on - strand, within BWI76_RS22695at 4728.979 kb on - strandat 4728.984 kb on - strandat 4729.054 kb on + strandat 4729.246 kb on + strand, within BWI76_RS22700at 4729.401 kb on + strand, within BWI76_RS22700at 4729.678 kb on + strand, within BWI76_RS22700at 4729.770 kb on + strand, within BWI76_RS22700at 4729.811 kb on + strandat 4729.894 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
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4,726,585 + -0.6
4,726,723 + BWI76_RS22685 0.47 -0.1
4,726,723 + BWI76_RS22685 0.47 +0.2
4,726,730 - BWI76_RS22685 0.49 -0.8
4,726,731 - BWI76_RS22685 0.50 -0.8
4,726,731 - BWI76_RS22685 0.50 -0.2
4,726,731 - BWI76_RS22685 0.50 -0.7
4,726,731 - BWI76_RS22685 0.50 +1.4
4,726,753 + BWI76_RS22685 0.56 +1.7
4,726,776 - BWI76_RS22685 0.63 -0.8
4,726,817 + BWI76_RS22685 0.76 +0.7
4,726,909 + -0.9
4,726,964 - -1.4
4,726,980 - -2.4
4,726,980 - +0.4
4,727,091 + BWI76_RS22690 0.23 -3.4
4,727,106 + BWI76_RS22690 0.26 -2.8
4,727,212 + BWI76_RS22690 0.43 +1.4
4,727,279 - BWI76_RS22690 0.54 +0.0
4,727,339 + BWI76_RS22690 0.64 -2.2
4,727,508 - -0.6
4,727,638 + +1.0
4,727,638 + -1.1
4,727,638 + -0.4
4,727,638 + -0.7
4,727,638 + -0.3
4,727,643 + -1.8
4,727,646 - -1.3
4,727,646 - -0.3
4,727,646 - -0.3
4,727,697 + BWI76_RS22695 0.10 -1.0
4,728,156 + -1.2
4,728,156 + BWI76_RS22695 0.42 -1.1
4,728,164 - BWI76_RS22695 0.43 -1.8
4,728,164 - BWI76_RS22695 0.43 -1.2
4,728,413 - BWI76_RS22695 0.60 -1.6
4,728,620 - BWI76_RS22695 0.75 -0.8
4,728,766 - BWI76_RS22695 0.85 -2.8
4,728,979 - -1.8
4,728,984 - +2.1
4,729,054 + -1.1
4,729,246 + BWI76_RS22700 0.28 -0.8
4,729,401 + BWI76_RS22700 0.45 -0.4
4,729,678 + BWI76_RS22700 0.76 -1.0
4,729,770 + BWI76_RS22700 0.86 -0.9
4,729,811 + +0.4
4,729,894 + -1.4

Or see this region's nucleotide sequence