Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19025

Experiment: D-Salicin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19020 and BWI76_RS19025 are separated by 245 nucleotidesBWI76_RS19025 and BWI76_RS19030 are separated by 216 nucleotides BWI76_RS19020: BWI76_RS19020 - UDP-glucose 6-dehydrogenase, at 3,948,696 to 3,949,862 _RS19020 BWI76_RS19025: BWI76_RS19025 - phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating), at 3,950,108 to 3,951,514 _RS19025 BWI76_RS19030: BWI76_RS19030 - hypothetical protein, at 3,951,731 to 3,952,939 _RS19030 Position (kb) 3950 3951 3952Strain fitness (log2 ratio) -2 -1 0 1 2at 3949.896 kb on - strandat 3949.896 kb on - strandat 3949.915 kb on + strandat 3949.923 kb on - strandat 3949.948 kb on + strandat 3949.956 kb on + strandat 3949.964 kb on - strandat 3949.966 kb on + strandat 3949.966 kb on + strandat 3949.974 kb on - strandat 3949.976 kb on - strandat 3950.019 kb on + strandat 3950.035 kb on - strandat 3950.124 kb on + strandat 3950.124 kb on + strandat 3950.132 kb on - strandat 3950.132 kb on - strandat 3950.132 kb on - strandat 3950.132 kb on - strandat 3950.132 kb on - strandat 3950.134 kb on - strandat 3950.152 kb on + strandat 3950.160 kb on - strandat 3950.245 kb on - strandat 3950.515 kb on - strand, within BWI76_RS19025at 3950.594 kb on - strand, within BWI76_RS19025at 3950.603 kb on + strand, within BWI76_RS19025at 3950.665 kb on - strand, within BWI76_RS19025at 3950.706 kb on - strand, within BWI76_RS19025at 3950.706 kb on - strand, within BWI76_RS19025at 3950.706 kb on - strand, within BWI76_RS19025at 3950.706 kb on - strand, within BWI76_RS19025at 3950.824 kb on + strand, within BWI76_RS19025at 3950.829 kb on + strand, within BWI76_RS19025at 3950.839 kb on - strand, within BWI76_RS19025at 3950.869 kb on - strand, within BWI76_RS19025at 3950.915 kb on + strand, within BWI76_RS19025at 3950.923 kb on - strand, within BWI76_RS19025at 3950.977 kb on + strand, within BWI76_RS19025at 3951.021 kb on - strand, within BWI76_RS19025at 3951.021 kb on - strand, within BWI76_RS19025at 3951.021 kb on - strand, within BWI76_RS19025at 3951.129 kb on - strand, within BWI76_RS19025at 3951.199 kb on + strand, within BWI76_RS19025at 3951.206 kb on + strand, within BWI76_RS19025at 3951.234 kb on + strand, within BWI76_RS19025at 3951.242 kb on - strand, within BWI76_RS19025at 3951.242 kb on - strand, within BWI76_RS19025at 3951.242 kb on - strand, within BWI76_RS19025at 3951.251 kb on - strand, within BWI76_RS19025at 3951.346 kb on - strand, within BWI76_RS19025at 3951.348 kb on + strandat 3951.356 kb on - strand, within BWI76_RS19025at 3951.356 kb on - strand, within BWI76_RS19025at 3951.356 kb on - strand, within BWI76_RS19025at 3951.356 kb on - strand, within BWI76_RS19025at 3951.356 kb on - strand, within BWI76_RS19025at 3951.356 kb on - strand, within BWI76_RS19025at 3951.356 kb on - strand, within BWI76_RS19025at 3951.440 kb on - strandat 3951.440 kb on - strandat 3951.460 kb on - strandat 3951.465 kb on - strandat 3951.465 kb on - strandat 3951.470 kb on - strandat 3951.471 kb on - strandat 3951.471 kb on - strandat 3951.471 kb on - strandat 3951.471 kb on - strandat 3951.471 kb on - strandat 3951.471 kb on - strandat 3951.486 kb on - strandat 3951.505 kb on - strandat 3951.542 kb on + strandat 3951.550 kb on - strandat 3951.550 kb on - strandat 3951.550 kb on - strandat 3951.550 kb on - strandat 3951.550 kb on - strandat 3951.551 kb on - strandat 3951.573 kb on - strandat 3951.574 kb on - strandat 3951.574 kb on - strandat 3951.584 kb on + strandat 3951.585 kb on - strandat 3951.585 kb on - strandat 3951.585 kb on - strandat 3951.585 kb on - strandat 3951.592 kb on - strandat 3951.767 kb on - strandat 3951.767 kb on - strandat 3951.905 kb on - strandat 3951.912 kb on - strand, within BWI76_RS19030at 3951.946 kb on - strand, within BWI76_RS19030at 3951.946 kb on - strand, within BWI76_RS19030at 3952.032 kb on - strand, within BWI76_RS19030at 3952.104 kb on - strand, within BWI76_RS19030at 3952.104 kb on - strand, within BWI76_RS19030at 3952.104 kb on - strand, within BWI76_RS19030at 3952.109 kb on - strand, within BWI76_RS19030at 3952.114 kb on - strand, within BWI76_RS19030at 3952.114 kb on - strand, within BWI76_RS19030at 3952.184 kb on - strand, within BWI76_RS19030at 3952.240 kb on - strand, within BWI76_RS19030at 3952.256 kb on - strand, within BWI76_RS19030at 3952.280 kb on - strand, within BWI76_RS19030at 3952.280 kb on - strand, within BWI76_RS19030at 3952.280 kb on - strand, within BWI76_RS19030at 3952.281 kb on - strand, within BWI76_RS19030at 3952.325 kb on - strand, within BWI76_RS19030at 3952.331 kb on - strand, within BWI76_RS19030at 3952.331 kb on - strand, within BWI76_RS19030at 3952.331 kb on - strandat 3952.331 kb on - strand, within BWI76_RS19030at 3952.331 kb on - strand, within BWI76_RS19030at 3952.331 kb on - strand, within BWI76_RS19030at 3952.331 kb on - strand, within BWI76_RS19030at 3952.331 kb on - strand, within BWI76_RS19030at 3952.337 kb on - strand, within BWI76_RS19030at 3952.405 kb on - strand, within BWI76_RS19030at 3952.415 kb on - strand, within BWI76_RS19030at 3952.434 kb on - strand, within BWI76_RS19030

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
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3,949,896 - -0.9
3,949,896 - -0.7
3,949,915 + -0.5
3,949,923 - -0.4
3,949,948 + +0.2
3,949,956 + +0.3
3,949,964 - -1.1
3,949,966 + +1.3
3,949,966 + +0.2
3,949,974 - +0.6
3,949,976 - +0.1
3,950,019 + -1.1
3,950,035 - -1.2
3,950,124 + -0.7
3,950,124 + -2.1
3,950,132 - -0.9
3,950,132 - +0.5
3,950,132 - +0.5
3,950,132 - -1.1
3,950,132 - +1.1
3,950,134 - -0.9
3,950,152 + -0.0
3,950,160 - -1.6
3,950,245 - +0.1
3,950,515 - BWI76_RS19025 0.29 -1.3
3,950,594 - BWI76_RS19025 0.35 -1.0
3,950,603 + BWI76_RS19025 0.35 -0.7
3,950,665 - BWI76_RS19025 0.40 -0.2
3,950,706 - BWI76_RS19025 0.43 -1.0
3,950,706 - BWI76_RS19025 0.43 -1.4
3,950,706 - BWI76_RS19025 0.43 -1.9
3,950,706 - BWI76_RS19025 0.43 -0.3
3,950,824 + BWI76_RS19025 0.51 -2.6
3,950,829 + BWI76_RS19025 0.51 -0.4
3,950,839 - BWI76_RS19025 0.52 -1.1
3,950,869 - BWI76_RS19025 0.54 -0.2
3,950,915 + BWI76_RS19025 0.57 -0.5
3,950,923 - BWI76_RS19025 0.58 -1.4
3,950,977 + BWI76_RS19025 0.62 +0.0
3,951,021 - BWI76_RS19025 0.65 -0.3
3,951,021 - BWI76_RS19025 0.65 -1.6
3,951,021 - BWI76_RS19025 0.65 -2.4
3,951,129 - BWI76_RS19025 0.73 -1.9
3,951,199 + BWI76_RS19025 0.78 -1.1
3,951,206 + BWI76_RS19025 0.78 -0.2
3,951,234 + BWI76_RS19025 0.80 +0.6
3,951,242 - BWI76_RS19025 0.81 -0.9
3,951,242 - BWI76_RS19025 0.81 -2.5
3,951,242 - BWI76_RS19025 0.81 -0.5
3,951,251 - BWI76_RS19025 0.81 -0.3
3,951,346 - BWI76_RS19025 0.88 -0.8
3,951,348 + -0.3
3,951,356 - BWI76_RS19025 0.89 -0.2
3,951,356 - BWI76_RS19025 0.89 -1.4
3,951,356 - BWI76_RS19025 0.89 -0.5
3,951,356 - BWI76_RS19025 0.89 -1.5
3,951,356 - BWI76_RS19025 0.89 -0.3
3,951,356 - BWI76_RS19025 0.89 -0.3
3,951,356 - BWI76_RS19025 0.89 -2.1
3,951,440 - -0.6
3,951,440 - -1.2
3,951,460 - -0.2
3,951,465 - -1.1
3,951,465 - +0.1
3,951,470 - -0.9
3,951,471 - -1.2
3,951,471 - -0.3
3,951,471 - -1.2
3,951,471 - -0.8
3,951,471 - -1.5
3,951,471 - -0.6
3,951,486 - -1.1
3,951,505 - -0.5
3,951,542 + +0.3
3,951,550 - -0.9
3,951,550 - +0.3
3,951,550 - -1.6
3,951,550 - -0.3
3,951,550 - -0.3
3,951,551 - -0.2
3,951,573 - +1.3
3,951,574 - +0.4
3,951,574 - +0.3
3,951,584 + -0.6
3,951,585 - +0.3
3,951,585 - -1.7
3,951,585 - -0.3
3,951,585 - +0.3
3,951,592 - -0.4
3,951,767 - -0.4
3,951,767 - -0.1
3,951,905 - +1.3
3,951,912 - BWI76_RS19030 0.15 -0.3
3,951,946 - BWI76_RS19030 0.18 +0.7
3,951,946 - BWI76_RS19030 0.18 +1.0
3,952,032 - BWI76_RS19030 0.25 -0.3
3,952,104 - BWI76_RS19030 0.31 +0.5
3,952,104 - BWI76_RS19030 0.31 -0.3
3,952,104 - BWI76_RS19030 0.31 -0.3
3,952,109 - BWI76_RS19030 0.31 +0.6
3,952,114 - BWI76_RS19030 0.32 +0.2
3,952,114 - BWI76_RS19030 0.32 +0.3
3,952,184 - BWI76_RS19030 0.37 -0.7
3,952,240 - BWI76_RS19030 0.42 +0.3
3,952,256 - BWI76_RS19030 0.43 +0.7
3,952,280 - BWI76_RS19030 0.45 +0.5
3,952,280 - BWI76_RS19030 0.45 +0.1
3,952,280 - BWI76_RS19030 0.45 -1.4
3,952,281 - BWI76_RS19030 0.45 -0.3
3,952,325 - BWI76_RS19030 0.49 -0.3
3,952,331 - BWI76_RS19030 0.50 -0.2
3,952,331 - BWI76_RS19030 0.50 +0.5
3,952,331 - +2.3
3,952,331 - BWI76_RS19030 0.50 -0.5
3,952,331 - BWI76_RS19030 0.50 -0.2
3,952,331 - BWI76_RS19030 0.50 -0.7
3,952,331 - BWI76_RS19030 0.50 +0.0
3,952,331 - BWI76_RS19030 0.50 -0.1
3,952,337 - BWI76_RS19030 0.50 -1.5
3,952,405 - BWI76_RS19030 0.56 +0.5
3,952,415 - BWI76_RS19030 0.57 -0.1
3,952,434 - BWI76_RS19030 0.58 +0.4

Or see this region's nucleotide sequence