Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19020 and BWI76_RS19025 are separated by 245 nucleotides BWI76_RS19025 and BWI76_RS19030 are separated by 216 nucleotides
BWI76_RS19020: BWI76_RS19020 - UDP-glucose 6-dehydrogenase, at 3,948,696 to 3,949,862
_RS19020
BWI76_RS19025: BWI76_RS19025 - phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating), at 3,950,108 to 3,951,514
_RS19025
BWI76_RS19030: BWI76_RS19030 - hypothetical protein, at 3,951,731 to 3,952,939
_RS19030
Position (kb)
3950
3951
3952 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3949.896 kb on - strand at 3949.896 kb on - strand at 3949.915 kb on + strand at 3949.923 kb on - strand at 3949.948 kb on + strand at 3949.956 kb on + strand at 3949.964 kb on - strand at 3949.966 kb on + strand at 3949.966 kb on + strand at 3949.974 kb on - strand at 3949.976 kb on - strand at 3950.019 kb on + strand at 3950.035 kb on - strand at 3950.124 kb on + strand at 3950.124 kb on + strand at 3950.132 kb on - strand at 3950.132 kb on - strand at 3950.132 kb on - strand at 3950.132 kb on - strand at 3950.132 kb on - strand at 3950.134 kb on - strand at 3950.152 kb on + strand at 3950.160 kb on - strand at 3950.245 kb on - strand at 3950.515 kb on - strand, within BWI76_RS19025 at 3950.594 kb on - strand, within BWI76_RS19025 at 3950.603 kb on + strand, within BWI76_RS19025 at 3950.665 kb on - strand, within BWI76_RS19025 at 3950.706 kb on - strand, within BWI76_RS19025 at 3950.706 kb on - strand, within BWI76_RS19025 at 3950.706 kb on - strand, within BWI76_RS19025 at 3950.706 kb on - strand, within BWI76_RS19025 at 3950.824 kb on + strand, within BWI76_RS19025 at 3950.829 kb on + strand, within BWI76_RS19025 at 3950.839 kb on - strand, within BWI76_RS19025 at 3950.869 kb on - strand, within BWI76_RS19025 at 3950.915 kb on + strand, within BWI76_RS19025 at 3950.923 kb on - strand, within BWI76_RS19025 at 3950.977 kb on + strand, within BWI76_RS19025 at 3951.021 kb on - strand, within BWI76_RS19025 at 3951.021 kb on - strand, within BWI76_RS19025 at 3951.021 kb on - strand, within BWI76_RS19025 at 3951.129 kb on - strand, within BWI76_RS19025 at 3951.199 kb on + strand, within BWI76_RS19025 at 3951.206 kb on + strand, within BWI76_RS19025 at 3951.234 kb on + strand, within BWI76_RS19025 at 3951.242 kb on - strand, within BWI76_RS19025 at 3951.242 kb on - strand, within BWI76_RS19025 at 3951.242 kb on - strand, within BWI76_RS19025 at 3951.251 kb on - strand, within BWI76_RS19025 at 3951.346 kb on - strand, within BWI76_RS19025 at 3951.348 kb on + strand at 3951.356 kb on - strand, within BWI76_RS19025 at 3951.356 kb on - strand, within BWI76_RS19025 at 3951.356 kb on - strand, within BWI76_RS19025 at 3951.356 kb on - strand, within BWI76_RS19025 at 3951.356 kb on - strand, within BWI76_RS19025 at 3951.356 kb on - strand, within BWI76_RS19025 at 3951.356 kb on - strand, within BWI76_RS19025 at 3951.440 kb on - strand at 3951.440 kb on - strand at 3951.460 kb on - strand at 3951.465 kb on - strand at 3951.465 kb on - strand at 3951.470 kb on - strand at 3951.471 kb on - strand at 3951.471 kb on - strand at 3951.471 kb on - strand at 3951.471 kb on - strand at 3951.471 kb on - strand at 3951.471 kb on - strand at 3951.486 kb on - strand at 3951.505 kb on - strand at 3951.542 kb on + strand at 3951.550 kb on - strand at 3951.550 kb on - strand at 3951.550 kb on - strand at 3951.550 kb on - strand at 3951.550 kb on - strand at 3951.551 kb on - strand at 3951.573 kb on - strand at 3951.574 kb on - strand at 3951.574 kb on - strand at 3951.584 kb on + strand at 3951.585 kb on - strand at 3951.585 kb on - strand at 3951.585 kb on - strand at 3951.585 kb on - strand at 3951.592 kb on - strand at 3951.767 kb on - strand at 3951.767 kb on - strand at 3951.905 kb on - strand at 3951.912 kb on - strand, within BWI76_RS19030 at 3951.946 kb on - strand, within BWI76_RS19030 at 3951.946 kb on - strand, within BWI76_RS19030 at 3952.032 kb on - strand, within BWI76_RS19030 at 3952.104 kb on - strand, within BWI76_RS19030 at 3952.104 kb on - strand, within BWI76_RS19030 at 3952.104 kb on - strand, within BWI76_RS19030 at 3952.109 kb on - strand, within BWI76_RS19030 at 3952.114 kb on - strand, within BWI76_RS19030 at 3952.114 kb on - strand, within BWI76_RS19030 at 3952.184 kb on - strand, within BWI76_RS19030 at 3952.240 kb on - strand, within BWI76_RS19030 at 3952.256 kb on - strand, within BWI76_RS19030 at 3952.280 kb on - strand, within BWI76_RS19030 at 3952.280 kb on - strand, within BWI76_RS19030 at 3952.280 kb on - strand, within BWI76_RS19030 at 3952.281 kb on - strand, within BWI76_RS19030 at 3952.325 kb on - strand, within BWI76_RS19030 at 3952.331 kb on - strand, within BWI76_RS19030 at 3952.331 kb on - strand, within BWI76_RS19030 at 3952.331 kb on - strand at 3952.331 kb on - strand, within BWI76_RS19030 at 3952.331 kb on - strand, within BWI76_RS19030 at 3952.331 kb on - strand, within BWI76_RS19030 at 3952.331 kb on - strand, within BWI76_RS19030 at 3952.331 kb on - strand, within BWI76_RS19030 at 3952.337 kb on - strand, within BWI76_RS19030 at 3952.405 kb on - strand, within BWI76_RS19030 at 3952.415 kb on - strand, within BWI76_RS19030 at 3952.434 kb on - strand, within BWI76_RS19030
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 3,949,896 - -0.9 3,949,896 - -0.7 3,949,915 + -0.5 3,949,923 - -0.4 3,949,948 + +0.2 3,949,956 + +0.3 3,949,964 - -1.1 3,949,966 + +1.3 3,949,966 + +0.2 3,949,974 - +0.6 3,949,976 - +0.1 3,950,019 + -1.1 3,950,035 - -1.2 3,950,124 + -0.7 3,950,124 + -2.1 3,950,132 - -0.9 3,950,132 - +0.5 3,950,132 - +0.5 3,950,132 - -1.1 3,950,132 - +1.1 3,950,134 - -0.9 3,950,152 + -0.0 3,950,160 - -1.6 3,950,245 - +0.1 3,950,515 - BWI76_RS19025 0.29 -1.3 3,950,594 - BWI76_RS19025 0.35 -1.0 3,950,603 + BWI76_RS19025 0.35 -0.7 3,950,665 - BWI76_RS19025 0.40 -0.2 3,950,706 - BWI76_RS19025 0.43 -1.0 3,950,706 - BWI76_RS19025 0.43 -1.4 3,950,706 - BWI76_RS19025 0.43 -1.9 3,950,706 - BWI76_RS19025 0.43 -0.3 3,950,824 + BWI76_RS19025 0.51 -2.6 3,950,829 + BWI76_RS19025 0.51 -0.4 3,950,839 - BWI76_RS19025 0.52 -1.1 3,950,869 - BWI76_RS19025 0.54 -0.2 3,950,915 + BWI76_RS19025 0.57 -0.5 3,950,923 - BWI76_RS19025 0.58 -1.4 3,950,977 + BWI76_RS19025 0.62 +0.0 3,951,021 - BWI76_RS19025 0.65 -0.3 3,951,021 - BWI76_RS19025 0.65 -1.6 3,951,021 - BWI76_RS19025 0.65 -2.4 3,951,129 - BWI76_RS19025 0.73 -1.9 3,951,199 + BWI76_RS19025 0.78 -1.1 3,951,206 + BWI76_RS19025 0.78 -0.2 3,951,234 + BWI76_RS19025 0.80 +0.6 3,951,242 - BWI76_RS19025 0.81 -0.9 3,951,242 - BWI76_RS19025 0.81 -2.5 3,951,242 - BWI76_RS19025 0.81 -0.5 3,951,251 - BWI76_RS19025 0.81 -0.3 3,951,346 - BWI76_RS19025 0.88 -0.8 3,951,348 + -0.3 3,951,356 - BWI76_RS19025 0.89 -0.2 3,951,356 - BWI76_RS19025 0.89 -1.4 3,951,356 - BWI76_RS19025 0.89 -0.5 3,951,356 - BWI76_RS19025 0.89 -1.5 3,951,356 - BWI76_RS19025 0.89 -0.3 3,951,356 - BWI76_RS19025 0.89 -0.3 3,951,356 - BWI76_RS19025 0.89 -2.1 3,951,440 - -0.6 3,951,440 - -1.2 3,951,460 - -0.2 3,951,465 - -1.1 3,951,465 - +0.1 3,951,470 - -0.9 3,951,471 - -1.2 3,951,471 - -0.3 3,951,471 - -1.2 3,951,471 - -0.8 3,951,471 - -1.5 3,951,471 - -0.6 3,951,486 - -1.1 3,951,505 - -0.5 3,951,542 + +0.3 3,951,550 - -0.9 3,951,550 - +0.3 3,951,550 - -1.6 3,951,550 - -0.3 3,951,550 - -0.3 3,951,551 - -0.2 3,951,573 - +1.3 3,951,574 - +0.4 3,951,574 - +0.3 3,951,584 + -0.6 3,951,585 - +0.3 3,951,585 - -1.7 3,951,585 - -0.3 3,951,585 - +0.3 3,951,592 - -0.4 3,951,767 - -0.4 3,951,767 - -0.1 3,951,905 - +1.3 3,951,912 - BWI76_RS19030 0.15 -0.3 3,951,946 - BWI76_RS19030 0.18 +0.7 3,951,946 - BWI76_RS19030 0.18 +1.0 3,952,032 - BWI76_RS19030 0.25 -0.3 3,952,104 - BWI76_RS19030 0.31 +0.5 3,952,104 - BWI76_RS19030 0.31 -0.3 3,952,104 - BWI76_RS19030 0.31 -0.3 3,952,109 - BWI76_RS19030 0.31 +0.6 3,952,114 - BWI76_RS19030 0.32 +0.2 3,952,114 - BWI76_RS19030 0.32 +0.3 3,952,184 - BWI76_RS19030 0.37 -0.7 3,952,240 - BWI76_RS19030 0.42 +0.3 3,952,256 - BWI76_RS19030 0.43 +0.7 3,952,280 - BWI76_RS19030 0.45 +0.5 3,952,280 - BWI76_RS19030 0.45 +0.1 3,952,280 - BWI76_RS19030 0.45 -1.4 3,952,281 - BWI76_RS19030 0.45 -0.3 3,952,325 - BWI76_RS19030 0.49 -0.3 3,952,331 - BWI76_RS19030 0.50 -0.2 3,952,331 - BWI76_RS19030 0.50 +0.5 3,952,331 - +2.3 3,952,331 - BWI76_RS19030 0.50 -0.5 3,952,331 - BWI76_RS19030 0.50 -0.2 3,952,331 - BWI76_RS19030 0.50 -0.7 3,952,331 - BWI76_RS19030 0.50 +0.0 3,952,331 - BWI76_RS19030 0.50 -0.1 3,952,337 - BWI76_RS19030 0.50 -1.5 3,952,405 - BWI76_RS19030 0.56 +0.5 3,952,415 - BWI76_RS19030 0.57 -0.1 3,952,434 - BWI76_RS19030 0.58 +0.4
Or see this region's nucleotide sequence