Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15705

Experiment: D-Salicin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS15690 and BWI76_RS15695 overlap by 4 nucleotidesBWI76_RS15695 and BWI76_RS15700 overlap by 4 nucleotidesBWI76_RS15700 and BWI76_RS15705 overlap by 4 nucleotidesBWI76_RS15705 and BWI76_RS15710 are separated by 643 nucleotides BWI76_RS15690: BWI76_RS15690 - hypothetical protein, at 3,275,790 to 3,276,065 _RS15690 BWI76_RS15695: BWI76_RS15695 - hypothetical protein, at 3,276,062 to 3,276,406 _RS15695 BWI76_RS15700: BWI76_RS15700 - hypothetical protein, at 3,276,403 to 3,276,945 _RS15700 BWI76_RS15705: BWI76_RS15705 - putative holin protein, at 3,276,942 to 3,277,253 _RS15705 BWI76_RS15710: BWI76_RS15710 - phage antitermination protein Q, at 3,277,897 to 3,278,586 _RS15710 Position (kb) 3276 3277 3278Strain fitness (log2 ratio) -1 0 1 2at 3275.959 kb on + strand, within BWI76_RS15690at 3276.178 kb on + strand, within BWI76_RS15695at 3276.218 kb on - strand, within BWI76_RS15695at 3276.253 kb on - strandat 3276.255 kb on - strand, within BWI76_RS15695at 3276.538 kb on - strand, within BWI76_RS15700at 3276.543 kb on - strand, within BWI76_RS15700at 3276.606 kb on - strand, within BWI76_RS15700at 3276.636 kb on + strand, within BWI76_RS15700at 3276.659 kb on + strand, within BWI76_RS15700at 3276.826 kb on - strand, within BWI76_RS15700at 3276.971 kb on + strandat 3276.989 kb on - strand, within BWI76_RS15705at 3276.999 kb on - strand, within BWI76_RS15705at 3277.031 kb on - strand, within BWI76_RS15705at 3277.062 kb on + strand, within BWI76_RS15705at 3277.212 kb on - strand, within BWI76_RS15705at 3277.243 kb on + strandat 3277.251 kb on - strandat 3277.300 kb on + strandat 3277.307 kb on - strandat 3277.308 kb on - strandat 3277.434 kb on + strandat 3277.491 kb on + strandat 3277.491 kb on + strandat 3277.562 kb on - strandat 3277.582 kb on + strandat 3277.616 kb on - strandat 3277.778 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
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3,275,959 + BWI76_RS15690 0.61 +0.0
3,276,178 + BWI76_RS15695 0.34 -0.3
3,276,218 - BWI76_RS15695 0.45 +0.6
3,276,253 - +2.3
3,276,255 - BWI76_RS15695 0.56 -0.6
3,276,538 - BWI76_RS15700 0.25 +0.3
3,276,543 - BWI76_RS15700 0.26 -0.4
3,276,606 - BWI76_RS15700 0.37 -0.6
3,276,636 + BWI76_RS15700 0.43 +0.2
3,276,659 + BWI76_RS15700 0.47 +0.3
3,276,826 - BWI76_RS15700 0.78 -0.4
3,276,971 + -0.8
3,276,989 - BWI76_RS15705 0.15 -0.7
3,276,999 - BWI76_RS15705 0.18 +0.2
3,277,031 - BWI76_RS15705 0.29 -1.1
3,277,062 + BWI76_RS15705 0.38 -1.0
3,277,212 - BWI76_RS15705 0.87 -1.2
3,277,243 + +0.0
3,277,251 - +0.1
3,277,300 + -1.1
3,277,307 - -0.4
3,277,308 - -0.5
3,277,434 + -0.4
3,277,491 + -1.1
3,277,491 + -1.4
3,277,562 - -0.5
3,277,582 + +0.3
3,277,616 - -0.8
3,277,778 + -0.4

Or see this region's nucleotide sequence