Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15690 and BWI76_RS15695 overlap by 4 nucleotides BWI76_RS15695 and BWI76_RS15700 overlap by 4 nucleotides BWI76_RS15700 and BWI76_RS15705 overlap by 4 nucleotides BWI76_RS15705 and BWI76_RS15710 are separated by 643 nucleotides
BWI76_RS15690: BWI76_RS15690 - hypothetical protein, at 3,275,790 to 3,276,065
_RS15690
BWI76_RS15695: BWI76_RS15695 - hypothetical protein, at 3,276,062 to 3,276,406
_RS15695
BWI76_RS15700: BWI76_RS15700 - hypothetical protein, at 3,276,403 to 3,276,945
_RS15700
BWI76_RS15705: BWI76_RS15705 - putative holin protein, at 3,276,942 to 3,277,253
_RS15705
BWI76_RS15710: BWI76_RS15710 - phage antitermination protein Q, at 3,277,897 to 3,278,586
_RS15710
Position (kb)
3276
3277
3278 Strain fitness (log2 ratio)
-1
0
1
2 at 3275.959 kb on + strand, within BWI76_RS15690 at 3276.178 kb on + strand, within BWI76_RS15695 at 3276.218 kb on - strand, within BWI76_RS15695 at 3276.253 kb on - strand at 3276.255 kb on - strand, within BWI76_RS15695 at 3276.538 kb on - strand, within BWI76_RS15700 at 3276.543 kb on - strand, within BWI76_RS15700 at 3276.606 kb on - strand, within BWI76_RS15700 at 3276.636 kb on + strand, within BWI76_RS15700 at 3276.659 kb on + strand, within BWI76_RS15700 at 3276.826 kb on - strand, within BWI76_RS15700 at 3276.971 kb on + strand at 3276.989 kb on - strand, within BWI76_RS15705 at 3276.999 kb on - strand, within BWI76_RS15705 at 3277.031 kb on - strand, within BWI76_RS15705 at 3277.062 kb on + strand, within BWI76_RS15705 at 3277.212 kb on - strand, within BWI76_RS15705 at 3277.243 kb on + strand at 3277.251 kb on - strand at 3277.300 kb on + strand at 3277.307 kb on - strand at 3277.308 kb on - strand at 3277.434 kb on + strand at 3277.491 kb on + strand at 3277.491 kb on + strand at 3277.562 kb on - strand at 3277.582 kb on + strand at 3277.616 kb on - strand at 3277.778 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 3,275,959 + BWI76_RS15690 0.61 +0.0 3,276,178 + BWI76_RS15695 0.34 -0.3 3,276,218 - BWI76_RS15695 0.45 +0.6 3,276,253 - +2.3 3,276,255 - BWI76_RS15695 0.56 -0.6 3,276,538 - BWI76_RS15700 0.25 +0.3 3,276,543 - BWI76_RS15700 0.26 -0.4 3,276,606 - BWI76_RS15700 0.37 -0.6 3,276,636 + BWI76_RS15700 0.43 +0.2 3,276,659 + BWI76_RS15700 0.47 +0.3 3,276,826 - BWI76_RS15700 0.78 -0.4 3,276,971 + -0.8 3,276,989 - BWI76_RS15705 0.15 -0.7 3,276,999 - BWI76_RS15705 0.18 +0.2 3,277,031 - BWI76_RS15705 0.29 -1.1 3,277,062 + BWI76_RS15705 0.38 -1.0 3,277,212 - BWI76_RS15705 0.87 -1.2 3,277,243 + +0.0 3,277,251 - +0.1 3,277,300 + -1.1 3,277,307 - -0.4 3,277,308 - -0.5 3,277,434 + -0.4 3,277,491 + -1.1 3,277,491 + -1.4 3,277,562 - -0.5 3,277,582 + +0.3 3,277,616 - -0.8 3,277,778 + -0.4
Or see this region's nucleotide sequence