Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15610 and BWI76_RS15615 are separated by 2 nucleotides BWI76_RS15615 and BWI76_RS15620 overlap by 1 nucleotides BWI76_RS15620 and BWI76_RS15625 are separated by 60 nucleotides BWI76_RS15625 and BWI76_RS15630 are separated by 9 nucleotides BWI76_RS15630 and BWI76_RS15635 are separated by 17 nucleotides BWI76_RS15635 and BWI76_RS15640 are separated by 12 nucleotides
BWI76_RS15610: BWI76_RS15610 - hypothetical protein, at 3,265,591 to 3,265,953
_RS15610
BWI76_RS15615: BWI76_RS15615 - hypothetical protein, at 3,265,956 to 3,266,126
_RS15615
BWI76_RS15620: BWI76_RS15620 - hypothetical protein, at 3,266,126 to 3,266,527
_RS15620
BWI76_RS15625: BWI76_RS15625 - hypothetical protein, at 3,266,588 to 3,266,770
_RS15625
BWI76_RS15630: BWI76_RS15630 - hypothetical protein, at 3,266,780 to 3,267,856
_RS15630
BWI76_RS15635: BWI76_RS15635 - hypothetical protein, at 3,267,874 to 3,268,320
_RS15635
BWI76_RS15640: BWI76_RS15640 - hypothetical protein, at 3,268,333 to 3,269,598
_RS15640
Position (kb)
3266
3267
3268 Strain fitness (log2 ratio)
-1
0
1 at 3266.131 kb on - strand at 3266.256 kb on - strand, within BWI76_RS15620 at 3266.502 kb on + strand at 3266.510 kb on - strand at 3266.702 kb on - strand, within BWI76_RS15625 at 3266.964 kb on - strand, within BWI76_RS15630 at 3267.066 kb on + strand at 3267.237 kb on - strand, within BWI76_RS15630 at 3267.495 kb on - strand, within BWI76_RS15630 at 3267.965 kb on - strand, within BWI76_RS15635 at 3267.965 kb on - strand, within BWI76_RS15635 at 3268.068 kb on - strand, within BWI76_RS15635 at 3268.143 kb on - strand, within BWI76_RS15635 at 3268.187 kb on + strand, within BWI76_RS15635 at 3268.271 kb on + strand, within BWI76_RS15635 at 3268.279 kb on - strand at 3268.771 kb on + strand, within BWI76_RS15640 at 3268.836 kb on - strand, within BWI76_RS15640
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 3,266,131 - -1.5 3,266,256 - BWI76_RS15620 0.32 -0.1 3,266,502 + -0.8 3,266,510 - +0.1 3,266,702 - BWI76_RS15625 0.62 -0.9 3,266,964 - BWI76_RS15630 0.17 -1.2 3,267,066 + +1.3 3,267,237 - BWI76_RS15630 0.42 -0.8 3,267,495 - BWI76_RS15630 0.66 -0.6 3,267,965 - BWI76_RS15635 0.20 -1.1 3,267,965 - BWI76_RS15635 0.20 -0.5 3,268,068 - BWI76_RS15635 0.43 -0.3 3,268,143 - BWI76_RS15635 0.60 -1.6 3,268,187 + BWI76_RS15635 0.70 -0.2 3,268,271 + BWI76_RS15635 0.89 +0.4 3,268,279 - -1.1 3,268,771 + BWI76_RS15640 0.35 -0.2 3,268,836 - BWI76_RS15640 0.40 +0.1
Or see this region's nucleotide sequence