Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08660 and BWI76_RS08665 are separated by 221 nucleotides BWI76_RS08665 and BWI76_RS08670 are separated by 60 nucleotides BWI76_RS08670 and BWI76_RS08675 are separated by 134 nucleotides
BWI76_RS08660: BWI76_RS08660 - pyridoxal phosphatase, at 1,825,847 to 1,826,665
_RS08660
BWI76_RS08665: BWI76_RS08665 - 6-phosphogluconolactonase, at 1,826,887 to 1,827,882
_RS08665
BWI76_RS08670: BWI76_RS08670 - N-acetyltransferase, at 1,827,943 to 1,828,419
_RS08670
BWI76_RS08675: BWI76_RS08675 - GntR family transcriptional regulator, at 1,828,554 to 1,830,023
_RS08675
Position (kb)
1826
1827
1828 Strain fitness (log2 ratio)
-1
0
1 at 1825.928 kb on - strand at 1826.051 kb on + strand, within BWI76_RS08660 at 1826.065 kb on - strand, within BWI76_RS08660 at 1826.127 kb on + strand, within BWI76_RS08660 at 1826.205 kb on + strand, within BWI76_RS08660 at 1826.205 kb on + strand, within BWI76_RS08660 at 1826.351 kb on - strand, within BWI76_RS08660 at 1826.544 kb on + strand, within BWI76_RS08660 at 1826.647 kb on - strand at 1826.709 kb on - strand at 1826.714 kb on + strand at 1826.714 kb on + strand at 1827.049 kb on + strand, within BWI76_RS08665 at 1827.097 kb on + strand, within BWI76_RS08665 at 1827.097 kb on + strand, within BWI76_RS08665 at 1827.200 kb on + strand, within BWI76_RS08665 at 1827.543 kb on - strand, within BWI76_RS08665 at 1827.612 kb on + strand, within BWI76_RS08665 at 1827.730 kb on - strand, within BWI76_RS08665 at 1827.779 kb on + strand, within BWI76_RS08665 at 1828.018 kb on - strand, within BWI76_RS08670 at 1828.042 kb on - strand, within BWI76_RS08670 at 1828.240 kb on - strand, within BWI76_RS08670 at 1828.240 kb on - strand, within BWI76_RS08670 at 1828.298 kb on - strand, within BWI76_RS08670 at 1828.450 kb on + strand at 1828.450 kb on + strand at 1828.614 kb on + strand at 1828.632 kb on - strand at 1828.642 kb on - strand at 1828.705 kb on - strand, within BWI76_RS08675 at 1828.755 kb on + strand, within BWI76_RS08675
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 1,825,928 - -0.3 1,826,051 + BWI76_RS08660 0.25 -0.2 1,826,065 - BWI76_RS08660 0.27 +0.4 1,826,127 + BWI76_RS08660 0.34 +0.6 1,826,205 + BWI76_RS08660 0.44 +0.5 1,826,205 + BWI76_RS08660 0.44 +0.2 1,826,351 - BWI76_RS08660 0.62 -0.4 1,826,544 + BWI76_RS08660 0.85 +0.4 1,826,647 - -0.4 1,826,709 - -0.3 1,826,714 + -0.6 1,826,714 + +0.8 1,827,049 + BWI76_RS08665 0.16 -1.1 1,827,097 + BWI76_RS08665 0.21 -0.8 1,827,097 + BWI76_RS08665 0.21 -0.9 1,827,200 + BWI76_RS08665 0.31 -0.9 1,827,543 - BWI76_RS08665 0.66 -0.7 1,827,612 + BWI76_RS08665 0.73 -1.3 1,827,730 - BWI76_RS08665 0.85 -0.8 1,827,779 + BWI76_RS08665 0.90 -0.3 1,828,018 - BWI76_RS08670 0.16 +0.1 1,828,042 - BWI76_RS08670 0.21 -0.0 1,828,240 - BWI76_RS08670 0.62 -0.3 1,828,240 - BWI76_RS08670 0.62 -0.9 1,828,298 - BWI76_RS08670 0.74 -0.3 1,828,450 + +0.6 1,828,450 + -0.5 1,828,614 + +0.7 1,828,632 - +0.1 1,828,642 - -0.4 1,828,705 - BWI76_RS08675 0.10 -0.6 1,828,755 + BWI76_RS08675 0.14 +0.1
Or see this region's nucleotide sequence