Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06080

Experiment: D-Salicin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06070 and BWI76_RS06075 overlap by 4 nucleotidesBWI76_RS06075 and BWI76_RS06080 overlap by 4 nucleotidesBWI76_RS06080 and BWI76_RS06085 are separated by 82 nucleotides BWI76_RS06070: BWI76_RS06070 - taurine transporter ATP-binding subunit, at 1,275,872 to 1,276,639 _RS06070 BWI76_RS06075: BWI76_RS06075 - taurine transporter subunit, at 1,276,636 to 1,277,463 _RS06075 BWI76_RS06080: BWI76_RS06080 - taurine dioxygenase, at 1,277,460 to 1,278,311 _RS06080 BWI76_RS06085: BWI76_RS06085 - hypothetical protein, at 1,278,394 to 1,280,112 _RS06085 Position (kb) 1277 1278 1279Strain fitness (log2 ratio) -1 0 1at 1276.606 kb on - strandat 1276.708 kb on + strandat 1276.735 kb on + strand, within BWI76_RS06075at 1277.315 kb on + strand, within BWI76_RS06075at 1277.902 kb on - strand, within BWI76_RS06080at 1278.216 kb on + strand, within BWI76_RS06080at 1278.224 kb on - strand, within BWI76_RS06080at 1278.257 kb on + strandat 1278.460 kb on + strandat 1278.468 kb on - strandat 1278.552 kb on + strandat 1278.554 kb on + strandat 1278.563 kb on + strandat 1278.801 kb on + strand, within BWI76_RS06085at 1278.847 kb on - strand, within BWI76_RS06085at 1278.878 kb on - strand, within BWI76_RS06085at 1278.888 kb on + strand, within BWI76_RS06085at 1278.896 kb on - strand, within BWI76_RS06085at 1278.957 kb on + strand, within BWI76_RS06085

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
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1,276,606 - +0.2
1,276,708 + +0.4
1,276,735 + BWI76_RS06075 0.12 +0.3
1,277,315 + BWI76_RS06075 0.82 +0.6
1,277,902 - BWI76_RS06080 0.52 -1.2
1,278,216 + BWI76_RS06080 0.89 -0.1
1,278,224 - BWI76_RS06080 0.90 -1.3
1,278,257 + +0.3
1,278,460 + +0.2
1,278,468 - +0.3
1,278,552 + +0.4
1,278,554 + -1.0
1,278,563 + +0.7
1,278,801 + BWI76_RS06085 0.24 +0.7
1,278,847 - BWI76_RS06085 0.26 -0.8
1,278,878 - BWI76_RS06085 0.28 -0.4
1,278,888 + BWI76_RS06085 0.29 -0.3
1,278,896 - BWI76_RS06085 0.29 +0.3
1,278,957 + BWI76_RS06085 0.33 +0.2

Or see this region's nucleotide sequence