Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04675 and BWI76_RS04680 overlap by 1 nucleotides BWI76_RS04680 and BWI76_RS04685 are separated by 95 nucleotides BWI76_RS04685 and BWI76_RS04690 are separated by 621 nucleotides
BWI76_RS04675: BWI76_RS04675 - 3-isopropylmalate dehydrogenase, at 975,088 to 976,179
_RS04675
BWI76_RS04680: BWI76_RS04680 - 2-isopropylmalate synthase, at 976,179 to 977,750
_RS04680
BWI76_RS04685: BWI76_RS04685 - putative leucine operon leader peptide, at 977,846 to 977,932
_RS04685
BWI76_RS04690: BWI76_RS04690 - transcriptional regulator LeuO, at 978,554 to 979,504
_RS04690
Position (kb) 976
977
978 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2
3 at 975.438 kb on + strand, within BWI76_RS04675 at 975.473 kb on + strand, within BWI76_RS04675 at 975.788 kb on - strand, within BWI76_RS04675 at 975.833 kb on - strand, within BWI76_RS04675 at 975.841 kb on - strand, within BWI76_RS04675 at 975.899 kb on + strand, within BWI76_RS04675 at 975.900 kb on - strand, within BWI76_RS04675 at 976.189 kb on + strand at 976.321 kb on - strand at 976.321 kb on - strand at 976.368 kb on - strand, within BWI76_RS04680 at 976.375 kb on + strand, within BWI76_RS04680 at 976.383 kb on - strand, within BWI76_RS04680 at 976.388 kb on - strand, within BWI76_RS04680 at 976.423 kb on - strand, within BWI76_RS04680 at 976.517 kb on + strand, within BWI76_RS04680 at 976.628 kb on + strand, within BWI76_RS04680 at 976.696 kb on - strand, within BWI76_RS04680 at 976.775 kb on + strand, within BWI76_RS04680 at 976.807 kb on - strand, within BWI76_RS04680 at 976.858 kb on + strand, within BWI76_RS04680 at 976.895 kb on - strand, within BWI76_RS04680 at 976.918 kb on + strand, within BWI76_RS04680 at 977.079 kb on - strand, within BWI76_RS04680 at 977.084 kb on - strand, within BWI76_RS04680 at 977.091 kb on + strand, within BWI76_RS04680 at 977.104 kb on - strand, within BWI76_RS04680 at 977.135 kb on - strand, within BWI76_RS04680 at 977.172 kb on + strand, within BWI76_RS04680 at 977.222 kb on + strand, within BWI76_RS04680 at 977.222 kb on + strand, within BWI76_RS04680 at 977.234 kb on - strand, within BWI76_RS04680 at 977.361 kb on - strand, within BWI76_RS04680 at 977.361 kb on - strand, within BWI76_RS04680 at 977.450 kb on + strand, within BWI76_RS04680 at 977.550 kb on + strand, within BWI76_RS04680 at 977.550 kb on + strand, within BWI76_RS04680 at 977.571 kb on + strand, within BWI76_RS04680 at 977.572 kb on - strand, within BWI76_RS04680 at 977.579 kb on - strand, within BWI76_RS04680 at 977.627 kb on + strand at 977.627 kb on + strand at 977.632 kb on + strand at 977.686 kb on - strand at 977.688 kb on + strand at 977.688 kb on + strand at 977.702 kb on + strand at 977.707 kb on - strand at 977.707 kb on - strand at 977.710 kb on - strand at 977.712 kb on + strand at 977.712 kb on + strand at 977.720 kb on - strand at 977.720 kb on - strand at 977.760 kb on - strand at 977.760 kb on - strand at 977.769 kb on + strand at 977.771 kb on + strand at 977.777 kb on - strand at 977.781 kb on - strand at 977.820 kb on + strand at 977.844 kb on + strand at 977.859 kb on + strand, within BWI76_RS04685 at 977.866 kb on + strand, within BWI76_RS04685 at 977.866 kb on + strand, within BWI76_RS04685 at 977.874 kb on - strand, within BWI76_RS04685 at 977.899 kb on + strand, within BWI76_RS04685 at 977.899 kb on + strand, within BWI76_RS04685 at 977.899 kb on + strand, within BWI76_RS04685 at 977.899 kb on + strand, within BWI76_RS04685 at 977.899 kb on - strand, within BWI76_RS04685 at 977.899 kb on - strand, within BWI76_RS04685 at 977.907 kb on - strand, within BWI76_RS04685 at 977.907 kb on - strand, within BWI76_RS04685 at 977.907 kb on - strand, within BWI76_RS04685 at 977.907 kb on - strand, within BWI76_RS04685 at 977.907 kb on - strand, within BWI76_RS04685 at 977.950 kb on - strand at 977.950 kb on - strand at 977.970 kb on - strand at 977.970 kb on - strand at 977.970 kb on - strand at 977.970 kb on - strand at 977.977 kb on + strand at 977.977 kb on + strand at 977.977 kb on + strand at 977.985 kb on - strand at 977.990 kb on + strand at 977.991 kb on + strand at 977.997 kb on + strand at 978.004 kb on - strand at 978.005 kb on - strand at 978.047 kb on + strand at 978.055 kb on - strand at 978.057 kb on - strand at 978.155 kb on - strand at 978.167 kb on - strand at 978.169 kb on + strand at 978.169 kb on + strand at 978.177 kb on - strand at 978.177 kb on - strand at 978.178 kb on - strand at 978.221 kb on - strand at 978.271 kb on + strand at 978.271 kb on + strand at 978.271 kb on + strand at 978.271 kb on + strand at 978.279 kb on - strand at 978.377 kb on + strand at 978.377 kb on + strand at 978.377 kb on + strand at 978.431 kb on + strand at 978.431 kb on - strand at 978.548 kb on - strand at 978.550 kb on - strand at 978.585 kb on + strand at 978.596 kb on + strand at 978.600 kb on + strand at 978.601 kb on + strand at 978.601 kb on + strand at 978.601 kb on + strand at 978.601 kb on + strand at 978.601 kb on + strand at 978.601 kb on + strand at 978.606 kb on + strand at 978.606 kb on + strand at 978.608 kb on + strand at 978.608 kb on + strand at 978.608 kb on + strand at 978.608 kb on + strand at 978.608 kb on - strand at 978.608 kb on - strand at 978.609 kb on - strand at 978.609 kb on - strand at 978.616 kb on - strand at 978.616 kb on - strand at 978.627 kb on + strand at 978.627 kb on + strand at 978.627 kb on + strand at 978.627 kb on + strand at 978.627 kb on + strand at 978.635 kb on - strand at 978.693 kb on + strand, within BWI76_RS04690 at 978.700 kb on - strand, within BWI76_RS04690 at 978.700 kb on - strand, within BWI76_RS04690 at 978.701 kb on - strand, within BWI76_RS04690 at 978.703 kb on + strand, within BWI76_RS04690 at 978.713 kb on + strand at 978.713 kb on + strand, within BWI76_RS04690 at 978.713 kb on + strand, within BWI76_RS04690 at 978.713 kb on + strand, within BWI76_RS04690 at 978.721 kb on - strand, within BWI76_RS04690 at 978.728 kb on - strand, within BWI76_RS04690 at 978.728 kb on - strand, within BWI76_RS04690
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 975,438 + BWI76_RS04675 0.32 -2.1 975,473 + BWI76_RS04675 0.35 -3.2 975,788 - BWI76_RS04675 0.64 -4.6 975,833 - BWI76_RS04675 0.68 -4.4 975,841 - BWI76_RS04675 0.69 -2.6 975,899 + BWI76_RS04675 0.74 -3.1 975,900 - BWI76_RS04675 0.74 -2.9 976,189 + -4.7 976,321 - -3.6 976,321 - -2.6 976,368 - BWI76_RS04680 0.12 -3.2 976,375 + BWI76_RS04680 0.12 -3.7 976,383 - BWI76_RS04680 0.13 -3.8 976,388 - BWI76_RS04680 0.13 -0.0 976,423 - BWI76_RS04680 0.16 -0.8 976,517 + BWI76_RS04680 0.22 -2.1 976,628 + BWI76_RS04680 0.29 -3.0 976,696 - BWI76_RS04680 0.33 -4.4 976,775 + BWI76_RS04680 0.38 -4.3 976,807 - BWI76_RS04680 0.40 -1.8 976,858 + BWI76_RS04680 0.43 -3.0 976,895 - BWI76_RS04680 0.46 -3.0 976,918 + BWI76_RS04680 0.47 -2.4 977,079 - BWI76_RS04680 0.57 -1.0 977,084 - BWI76_RS04680 0.58 -3.2 977,091 + BWI76_RS04680 0.58 -1.0 977,104 - BWI76_RS04680 0.59 -5.9 977,135 - BWI76_RS04680 0.61 +0.6 977,172 + BWI76_RS04680 0.63 -1.2 977,222 + BWI76_RS04680 0.66 -2.9 977,222 + BWI76_RS04680 0.66 -5.2 977,234 - BWI76_RS04680 0.67 -2.0 977,361 - BWI76_RS04680 0.75 -2.8 977,361 - BWI76_RS04680 0.75 -0.2 977,450 + BWI76_RS04680 0.81 -2.8 977,550 + BWI76_RS04680 0.87 -3.4 977,550 + BWI76_RS04680 0.87 -2.3 977,571 + BWI76_RS04680 0.89 -2.6 977,572 - BWI76_RS04680 0.89 -3.1 977,579 - BWI76_RS04680 0.89 -3.9 977,627 + -1.7 977,627 + -3.2 977,632 + -2.1 977,686 - -4.5 977,688 + -3.4 977,688 + -1.4 977,702 + -4.6 977,707 - -2.9 977,707 - -0.4 977,710 - -3.1 977,712 + -2.8 977,712 + -3.3 977,720 - -0.9 977,720 - -0.0 977,760 - -2.7 977,760 - -2.2 977,769 + -2.7 977,771 + -3.8 977,777 - -2.4 977,781 - -1.4 977,820 + -1.0 977,844 + -2.4 977,859 + BWI76_RS04685 0.15 -3.8 977,866 + BWI76_RS04685 0.23 -3.0 977,866 + BWI76_RS04685 0.23 -0.0 977,874 - BWI76_RS04685 0.32 -4.9 977,899 + BWI76_RS04685 0.61 -4.1 977,899 + BWI76_RS04685 0.61 -2.3 977,899 + BWI76_RS04685 0.61 -1.3 977,899 + BWI76_RS04685 0.61 -4.7 977,899 - BWI76_RS04685 0.61 -3.9 977,899 - BWI76_RS04685 0.61 -0.4 977,907 - BWI76_RS04685 0.70 +1.6 977,907 - BWI76_RS04685 0.70 -3.1 977,907 - BWI76_RS04685 0.70 -3.2 977,907 - BWI76_RS04685 0.70 -1.9 977,907 - BWI76_RS04685 0.70 -2.1 977,950 - +0.3 977,950 - -1.3 977,970 - -0.8 977,970 - -2.2 977,970 - -0.9 977,970 - -1.2 977,977 + -0.0 977,977 + -3.7 977,977 + -1.2 977,985 - -0.8 977,990 + -0.0 977,991 + -0.3 977,997 + -0.3 978,004 - -0.3 978,005 - +0.2 978,047 + +0.7 978,055 - +0.2 978,057 - +0.8 978,155 - +1.9 978,167 - -0.6 978,169 + +0.4 978,169 + -1.0 978,177 - +0.6 978,177 - +0.6 978,178 - -0.4 978,221 - +0.4 978,271 + +1.0 978,271 + -0.3 978,271 + +0.9 978,271 + +1.3 978,279 - +0.6 978,377 + -0.3 978,377 + -0.2 978,377 + -1.1 978,431 + -2.7 978,431 - +0.8 978,548 - +0.3 978,550 - +0.4 978,585 + +1.3 978,596 + +3.6 978,600 + +0.3 978,601 + +1.1 978,601 + -0.1 978,601 + +1.1 978,601 + -0.3 978,601 + +0.4 978,601 + +0.7 978,606 + +0.5 978,606 + -0.3 978,608 + -3.0 978,608 + +0.2 978,608 + +0.3 978,608 + +0.4 978,608 - +0.3 978,608 - +0.9 978,609 - +0.7 978,609 - +0.7 978,616 - -0.2 978,616 - -0.1 978,627 + -0.2 978,627 + -1.0 978,627 + +0.2 978,627 + -0.3 978,627 + +0.4 978,635 - +0.6 978,693 + BWI76_RS04690 0.15 +0.3 978,700 - BWI76_RS04690 0.15 -0.0 978,700 - BWI76_RS04690 0.15 -0.6 978,701 - BWI76_RS04690 0.15 +0.3 978,703 + BWI76_RS04690 0.16 -0.0 978,713 + +3.2 978,713 + BWI76_RS04690 0.17 +0.4 978,713 + BWI76_RS04690 0.17 -0.0 978,713 + BWI76_RS04690 0.17 +2.3 978,721 - BWI76_RS04690 0.18 +0.2 978,728 - BWI76_RS04690 0.18 +0.6 978,728 - BWI76_RS04690 0.18 +0.0
Or see this region's nucleotide sequence