Experiment: Gly-Glu (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04595 and AO353_04600 are separated by 450 nucleotides AO353_04600 and AO353_04605 are separated by 10 nucleotides
AO353_04595: AO353_04595 - GntR family transcriptional regulator, at 991,642 to 992,301
_04595
AO353_04600: AO353_04600 - glutamine ABC transporter ATP-binding protein, at 992,752 to 993,516
_04600
AO353_04605: AO353_04605 - amino acid ABC transporter permease, at 993,527 to 994,624
_04605
Position (kb) 992
993
994 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 991.808 kb on + strand, within AO353_04595 at 991.819 kb on - strand, within AO353_04595 at 991.831 kb on - strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.885 kb on - strand, within AO353_04595 at 992.251 kb on + strand at 992.252 kb on - strand at 992.252 kb on - strand at 992.326 kb on + strand at 992.348 kb on + strand at 992.348 kb on + strand at 992.349 kb on - strand at 992.385 kb on - strand at 992.385 kb on - strand at 992.385 kb on - strand at 992.385 kb on - strand at 992.426 kb on - strand at 992.426 kb on - strand at 992.426 kb on - strand at 992.432 kb on + strand at 992.442 kb on + strand at 992.442 kb on + strand at 992.442 kb on + strand at 992.442 kb on + strand at 992.442 kb on + strand at 992.442 kb on + strand at 992.442 kb on + strand at 992.442 kb on + strand at 992.443 kb on - strand at 992.443 kb on - strand at 992.443 kb on - strand at 992.443 kb on - strand at 992.443 kb on - strand at 992.443 kb on - strand at 992.443 kb on - strand at 992.443 kb on - strand at 992.443 kb on - strand at 992.445 kb on + strand at 992.446 kb on - strand at 992.446 kb on - strand at 992.446 kb on - strand at 992.446 kb on - strand at 992.446 kb on - strand at 992.446 kb on - strand at 992.446 kb on - strand at 992.467 kb on + strand at 992.540 kb on + strand at 992.563 kb on - strand at 992.639 kb on + strand at 992.639 kb on + strand at 992.639 kb on + strand at 992.640 kb on - strand at 992.640 kb on - strand at 992.640 kb on - strand at 992.729 kb on + strand at 993.080 kb on + strand, within AO353_04600 at 993.080 kb on + strand, within AO353_04600 at 993.119 kb on + strand, within AO353_04600 at 993.119 kb on + strand, within AO353_04600 at 993.120 kb on - strand, within AO353_04600 at 993.120 kb on - strand, within AO353_04600 at 993.120 kb on - strand, within AO353_04600 at 993.289 kb on + strand, within AO353_04600 at 993.289 kb on + strand, within AO353_04600 at 993.289 kb on + strand, within AO353_04600 at 993.289 kb on + strand, within AO353_04600 at 993.289 kb on + strand, within AO353_04600 at 993.289 kb on + strand, within AO353_04600 at 993.289 kb on + strand, within AO353_04600 at 993.289 kb on + strand, within AO353_04600 at 993.289 kb on + strand, within AO353_04600 at 993.290 kb on - strand, within AO353_04600 at 993.290 kb on - strand, within AO353_04600 at 993.290 kb on - strand, within AO353_04600 at 993.290 kb on - strand, within AO353_04600 at 993.390 kb on + strand, within AO353_04600 at 993.390 kb on + strand, within AO353_04600 at 993.390 kb on + strand, within AO353_04600 at 993.390 kb on + strand, within AO353_04600 at 993.391 kb on - strand, within AO353_04600 at 993.430 kb on + strand, within AO353_04600 at 993.430 kb on + strand, within AO353_04600 at 993.430 kb on + strand, within AO353_04600 at 993.430 kb on + strand, within AO353_04600 at 993.430 kb on + strand, within AO353_04600 at 993.431 kb on - strand, within AO353_04600 at 993.446 kb on + strand at 993.474 kb on + strand at 993.475 kb on - strand at 993.475 kb on - strand at 993.583 kb on + strand at 993.583 kb on + strand at 993.583 kb on + strand at 993.584 kb on - strand at 993.584 kb on - strand at 993.584 kb on - strand at 993.584 kb on - strand at 993.620 kb on + strand at 993.620 kb on + strand at 993.620 kb on + strand at 993.620 kb on + strand at 993.620 kb on + strand at 993.620 kb on + strand at 993.620 kb on + strand at 993.621 kb on - strand at 993.621 kb on - strand at 993.621 kb on - strand at 993.621 kb on - strand at 993.621 kb on - strand at 993.621 kb on - strand at 993.621 kb on - strand at 993.621 kb on - strand at 993.621 kb on - strand at 993.621 kb on - strand at 993.621 kb on - strand at 993.621 kb on - strand at 993.621 kb on - strand at 993.621 kb on - strand at 993.621 kb on - strand at 993.621 kb on - strand at 993.621 kb on - strand at 993.624 kb on + strand at 993.624 kb on + strand at 993.624 kb on + strand at 993.624 kb on + strand at 993.624 kb on + strand at 993.624 kb on + strand at 993.624 kb on + strand at 993.625 kb on - strand at 993.625 kb on - strand at 993.625 kb on - strand at 993.625 kb on - strand at 993.625 kb on - strand at 993.625 kb on - strand at 993.625 kb on - strand at 993.625 kb on - strand at 993.625 kb on - strand at 993.625 kb on - strand at 993.843 kb on + strand, within AO353_04605 at 993.843 kb on + strand, within AO353_04605 at 993.844 kb on - strand, within AO353_04605 at 993.844 kb on - strand, within AO353_04605 at 993.894 kb on + strand, within AO353_04605 at 993.894 kb on + strand, within AO353_04605 at 993.894 kb on + strand, within AO353_04605 at 993.894 kb on + strand, within AO353_04605 at 993.894 kb on + strand, within AO353_04605 at 993.895 kb on - strand, within AO353_04605 at 993.895 kb on - strand, within AO353_04605 at 993.895 kb on - strand, within AO353_04605 at 994.215 kb on + strand, within AO353_04605 at 994.215 kb on + strand, within AO353_04605 at 994.215 kb on + strand, within AO353_04605 at 994.215 kb on + strand, within AO353_04605 at 994.215 kb on + strand, within AO353_04605 at 994.215 kb on + strand, within AO353_04605 at 994.215 kb on + strand, within AO353_04605 at 994.215 kb on + strand, within AO353_04605 at 994.216 kb on - strand, within AO353_04605 at 994.216 kb on - strand, within AO353_04605 at 994.216 kb on - strand, within AO353_04605 at 994.216 kb on - strand, within AO353_04605 at 994.216 kb on - strand, within AO353_04605 at 994.216 kb on - strand, within AO353_04605 at 994.216 kb on - strand, within AO353_04605 at 994.216 kb on - strand, within AO353_04605 at 994.254 kb on + strand, within AO353_04605 at 994.264 kb on + strand, within AO353_04605 at 994.353 kb on + strand, within AO353_04605 at 994.356 kb on + strand, within AO353_04605 at 994.356 kb on + strand, within AO353_04605 at 994.357 kb on - strand, within AO353_04605 at 994.357 kb on - strand, within AO353_04605 at 994.362 kb on + strand, within AO353_04605 at 994.362 kb on + strand, within AO353_04605 at 994.362 kb on + strand, within AO353_04605 at 994.362 kb on + strand, within AO353_04605 at 994.362 kb on + strand, within AO353_04605 at 994.362 kb on + strand, within AO353_04605 at 994.362 kb on + strand, within AO353_04605 at 994.363 kb on - strand, within AO353_04605 at 994.363 kb on - strand, within AO353_04605 at 994.363 kb on - strand, within AO353_04605 at 994.484 kb on + strand, within AO353_04605 at 994.491 kb on + strand, within AO353_04605 at 994.491 kb on + strand, within AO353_04605 at 994.492 kb on - strand, within AO353_04605 at 994.492 kb on - strand, within AO353_04605 at 994.492 kb on - strand, within AO353_04605 at 994.492 kb on - strand, within AO353_04605 at 994.500 kb on + strand, within AO353_04605 at 994.500 kb on + strand, within AO353_04605 at 994.500 kb on + strand, within AO353_04605 at 994.501 kb on - strand, within AO353_04605 at 994.501 kb on - strand, within AO353_04605
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (N) remove 991,808 + AO353_04595 0.25 -0.1 991,819 - AO353_04595 0.27 +2.0 991,831 - AO353_04595 0.29 +0.7 991,880 + AO353_04595 0.36 -1.4 991,880 + AO353_04595 0.36 -0.3 991,880 + AO353_04595 0.36 +1.4 991,880 + AO353_04595 0.36 -1.3 991,880 + AO353_04595 0.36 +1.5 991,880 + AO353_04595 0.36 +0.4 991,880 + AO353_04595 0.36 -1.0 991,880 + AO353_04595 0.36 +1.0 991,880 + AO353_04595 0.36 +0.4 991,880 + AO353_04595 0.36 +0.6 991,880 + AO353_04595 0.36 -1.4 991,880 + AO353_04595 0.36 -0.7 991,880 + AO353_04595 0.36 -0.9 991,880 + AO353_04595 0.36 +0.0 991,880 + AO353_04595 0.36 -0.6 991,880 + AO353_04595 0.36 -0.7 991,880 + AO353_04595 0.36 -1.5 991,880 + AO353_04595 0.36 -0.9 991,880 + AO353_04595 0.36 +0.3 991,880 + AO353_04595 0.36 -0.4 991,880 + AO353_04595 0.36 +0.8 991,880 + AO353_04595 0.36 -1.2 991,880 + AO353_04595 0.36 +0.4 991,880 + AO353_04595 0.36 -0.2 991,880 + AO353_04595 0.36 +1.0 991,880 + AO353_04595 0.36 -1.3 991,880 + AO353_04595 0.36 +0.5 991,880 + AO353_04595 0.36 -1.4 991,881 - AO353_04595 0.36 +0.6 991,881 - AO353_04595 0.36 -0.2 991,881 - AO353_04595 0.36 +0.4 991,881 - AO353_04595 0.36 +1.1 991,881 - AO353_04595 0.36 -0.4 991,881 - AO353_04595 0.36 -0.6 991,881 - AO353_04595 0.36 +0.3 991,881 - AO353_04595 0.36 -2.3 991,881 - AO353_04595 0.36 +1.2 991,881 - AO353_04595 0.36 -0.3 991,881 - AO353_04595 0.36 -0.5 991,881 - AO353_04595 0.36 +1.0 991,881 - AO353_04595 0.36 -0.4 991,881 - AO353_04595 0.36 -0.7 991,881 - AO353_04595 0.36 -0.2 991,881 - AO353_04595 0.36 -0.3 991,881 - AO353_04595 0.36 -0.1 991,881 - AO353_04595 0.36 +0.4 991,881 - AO353_04595 0.36 +0.8 991,881 - AO353_04595 0.36 +0.7 991,881 - AO353_04595 0.36 -2.0 991,881 - AO353_04595 0.36 -1.5 991,881 - AO353_04595 0.36 +0.7 991,881 - AO353_04595 0.36 -0.2 991,881 - AO353_04595 0.36 +0.6 991,881 - AO353_04595 0.36 +0.4 991,881 - AO353_04595 0.36 +0.9 991,881 - AO353_04595 0.36 +0.0 991,881 - AO353_04595 0.36 +0.6 991,881 - AO353_04595 0.36 +2.0 991,881 - AO353_04595 0.36 -1.0 991,881 - AO353_04595 0.36 +1.9 991,885 - AO353_04595 0.37 +0.4 992,251 + -0.3 992,252 - -0.1 992,252 - +0.5 992,326 + -1.0 992,348 + -1.1 992,348 + +1.2 992,349 - -0.5 992,385 - -2.0 992,385 - +2.3 992,385 - +1.0 992,385 - -0.5 992,426 - +0.4 992,426 - +0.4 992,426 - -0.1 992,432 + -0.1 992,442 + -0.6 992,442 + -0.6 992,442 + -0.7 992,442 + -0.1 992,442 + -0.7 992,442 + +0.6 992,442 + -0.6 992,442 + +0.8 992,443 - +0.0 992,443 - -0.2 992,443 - -1.3 992,443 - -2.3 992,443 - -0.2 992,443 - -0.7 992,443 - -0.4 992,443 - +0.9 992,443 - -1.1 992,445 + -0.5 992,446 - -1.7 992,446 - -0.5 992,446 - +0.7 992,446 - +0.4 992,446 - +0.4 992,446 - -0.1 992,446 - +0.1 992,467 + +0.0 992,540 + +0.3 992,563 - -1.0 992,639 + +0.2 992,639 + +0.4 992,639 + +1.1 992,640 - +1.0 992,640 - +0.3 992,640 - -1.2 992,729 + -0.7 993,080 + AO353_04600 0.43 -1.2 993,080 + AO353_04600 0.43 +0.4 993,119 + AO353_04600 0.48 -1.3 993,119 + AO353_04600 0.48 -2.4 993,120 - AO353_04600 0.48 +0.3 993,120 - AO353_04600 0.48 -0.4 993,120 - AO353_04600 0.48 -0.4 993,289 + AO353_04600 0.70 -0.1 993,289 + AO353_04600 0.70 -1.7 993,289 + AO353_04600 0.70 -0.1 993,289 + AO353_04600 0.70 -2.3 993,289 + AO353_04600 0.70 +0.6 993,289 + AO353_04600 0.70 -1.6 993,289 + AO353_04600 0.70 +0.8 993,289 + AO353_04600 0.70 -1.9 993,289 + AO353_04600 0.70 +0.1 993,290 - AO353_04600 0.70 -0.4 993,290 - AO353_04600 0.70 -1.3 993,290 - AO353_04600 0.70 -0.2 993,290 - AO353_04600 0.70 -2.8 993,390 + AO353_04600 0.83 -2.1 993,390 + AO353_04600 0.83 -1.1 993,390 + AO353_04600 0.83 -1.6 993,390 + AO353_04600 0.83 -0.2 993,391 - AO353_04600 0.84 -1.2 993,430 + AO353_04600 0.89 -0.2 993,430 + AO353_04600 0.89 -1.7 993,430 + AO353_04600 0.89 +0.6 993,430 + AO353_04600 0.89 +1.0 993,430 + AO353_04600 0.89 -1.7 993,431 - AO353_04600 0.89 -0.5 993,446 + -0.2 993,474 + -1.5 993,475 - +0.3 993,475 - -1.1 993,583 + -1.0 993,583 + -2.3 993,583 + -1.6 993,584 - -0.6 993,584 - -0.9 993,584 - -0.9 993,584 - +0.0 993,620 + -1.6 993,620 + -1.8 993,620 + -1.2 993,620 + -0.5 993,620 + -0.1 993,620 + -0.3 993,620 + +0.0 993,621 - +0.1 993,621 - -0.1 993,621 - -0.3 993,621 - -0.2 993,621 - -0.3 993,621 - -1.2 993,621 - -0.4 993,621 - -0.7 993,621 - -1.2 993,621 - -1.0 993,621 - -1.1 993,621 - -1.4 993,621 - -0.9 993,621 - -0.3 993,621 - -0.5 993,621 - +0.3 993,621 - -0.9 993,624 + +0.7 993,624 + -2.3 993,624 + -0.3 993,624 + -1.4 993,624 + -0.6 993,624 + -2.0 993,624 + -0.4 993,625 - -1.1 993,625 - -1.3 993,625 - -2.9 993,625 - -1.3 993,625 - -0.9 993,625 - -1.4 993,625 - +0.7 993,625 - +0.8 993,625 - -2.6 993,625 - -0.4 993,843 + AO353_04605 0.29 +2.3 993,843 + AO353_04605 0.29 -0.6 993,844 - AO353_04605 0.29 -1.6 993,844 - AO353_04605 0.29 -0.3 993,894 + AO353_04605 0.33 +0.4 993,894 + AO353_04605 0.33 -0.7 993,894 + AO353_04605 0.33 -1.7 993,894 + AO353_04605 0.33 -1.5 993,894 + AO353_04605 0.33 -1.3 993,895 - AO353_04605 0.34 +0.8 993,895 - AO353_04605 0.34 -2.6 993,895 - AO353_04605 0.34 -1.9 994,215 + AO353_04605 0.63 -1.4 994,215 + AO353_04605 0.63 -1.5 994,215 + AO353_04605 0.63 -0.5 994,215 + AO353_04605 0.63 -0.4 994,215 + AO353_04605 0.63 -1.2 994,215 + AO353_04605 0.63 -1.0 994,215 + AO353_04605 0.63 -0.4 994,215 + AO353_04605 0.63 -0.7 994,216 - AO353_04605 0.63 -0.3 994,216 - AO353_04605 0.63 -0.2 994,216 - AO353_04605 0.63 +0.6 994,216 - AO353_04605 0.63 -0.7 994,216 - AO353_04605 0.63 -0.6 994,216 - AO353_04605 0.63 +0.0 994,216 - AO353_04605 0.63 -2.4 994,216 - AO353_04605 0.63 -0.6 994,254 + AO353_04605 0.66 -0.3 994,264 + AO353_04605 0.67 -1.0 994,353 + AO353_04605 0.75 +0.3 994,356 + AO353_04605 0.76 -0.6 994,356 + AO353_04605 0.76 -2.1 994,357 - AO353_04605 0.76 +1.0 994,357 - AO353_04605 0.76 +0.6 994,362 + AO353_04605 0.76 -1.5 994,362 + AO353_04605 0.76 -1.3 994,362 + AO353_04605 0.76 +0.5 994,362 + AO353_04605 0.76 -1.1 994,362 + AO353_04605 0.76 -1.3 994,362 + AO353_04605 0.76 -1.0 994,362 + AO353_04605 0.76 -0.4 994,363 - AO353_04605 0.76 +1.3 994,363 - AO353_04605 0.76 -1.2 994,363 - AO353_04605 0.76 -0.6 994,484 + AO353_04605 0.87 +0.0 994,491 + AO353_04605 0.88 -0.6 994,491 + AO353_04605 0.88 -1.2 994,492 - AO353_04605 0.88 +1.3 994,492 - AO353_04605 0.88 -0.6 994,492 - AO353_04605 0.88 -0.2 994,492 - AO353_04605 0.88 +0.1 994,500 + AO353_04605 0.89 -0.5 994,500 + AO353_04605 0.89 -0.0 994,500 + AO353_04605 0.89 +0.9 994,501 - AO353_04605 0.89 -2.1 994,501 - AO353_04605 0.89 -0.1
Or see this region's nucleotide sequence