Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_02325

Experiment: Gly-Glu (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_02320 and AO353_02325 overlap by 4 nucleotidesAO353_02325 and AO353_02330 are separated by 89 nucleotides AO353_02320: AO353_02320 - allantoinase, at 493,453 to 494,379 _02320 AO353_02325: AO353_02325 - OHCU decarboxylase, at 494,376 to 494,891 _02325 AO353_02330: AO353_02330 - allantoicase, at 494,981 to 495,976 _02330 Position (kb) 494 495Strain fitness (log2 ratio) -2 -1 0 1 2at 493.422 kb on + strandat 493.422 kb on + strandat 493.422 kb on + strandat 493.422 kb on + strandat 493.422 kb on + strandat 493.422 kb on + strandat 493.422 kb on + strandat 493.423 kb on - strandat 493.423 kb on - strandat 493.423 kb on - strandat 493.423 kb on - strandat 493.426 kb on + strandat 493.426 kb on + strandat 493.426 kb on + strandat 493.426 kb on + strandat 493.427 kb on - strandat 493.427 kb on - strandat 493.436 kb on + strandat 493.436 kb on + strandat 493.436 kb on + strandat 493.555 kb on + strand, within AO353_02320at 493.555 kb on + strand, within AO353_02320at 493.556 kb on - strand, within AO353_02320at 493.556 kb on - strand, within AO353_02320at 493.676 kb on - strand, within AO353_02320at 493.682 kb on - strand, within AO353_02320at 493.682 kb on - strand, within AO353_02320at 493.849 kb on + strand, within AO353_02320at 493.855 kb on + strand, within AO353_02320at 493.855 kb on + strand, within AO353_02320at 493.855 kb on + strand, within AO353_02320at 493.855 kb on + strand, within AO353_02320at 493.855 kb on + strand, within AO353_02320at 493.855 kb on + strand, within AO353_02320at 493.855 kb on + strand, within AO353_02320at 493.855 kb on + strand, within AO353_02320at 493.855 kb on + strand, within AO353_02320at 493.856 kb on - strand, within AO353_02320at 493.856 kb on - strand, within AO353_02320at 493.856 kb on - strand, within AO353_02320at 493.856 kb on - strand, within AO353_02320at 493.942 kb on + strand, within AO353_02320at 493.943 kb on - strand, within AO353_02320at 494.003 kb on - strand, within AO353_02320at 494.003 kb on - strand, within AO353_02320at 494.017 kb on + strand, within AO353_02320at 494.017 kb on + strand, within AO353_02320at 494.018 kb on - strand, within AO353_02320at 494.018 kb on - strand, within AO353_02320at 494.018 kb on - strand, within AO353_02320at 494.018 kb on - strand, within AO353_02320at 494.018 kb on - strand, within AO353_02320at 494.018 kb on - strand, within AO353_02320at 494.018 kb on - strand, within AO353_02320at 494.019 kb on - strand, within AO353_02320at 494.083 kb on + strand, within AO353_02320at 494.084 kb on - strand, within AO353_02320at 494.150 kb on - strand, within AO353_02320at 494.155 kb on + strand, within AO353_02320at 494.155 kb on + strand, within AO353_02320at 494.156 kb on - strand, within AO353_02320at 494.182 kb on + strand, within AO353_02320at 494.448 kb on + strand, within AO353_02325at 494.448 kb on + strand, within AO353_02325at 494.448 kb on + strand, within AO353_02325at 494.448 kb on + strand, within AO353_02325at 494.448 kb on + strand, within AO353_02325at 494.448 kb on + strand, within AO353_02325at 494.448 kb on + strand, within AO353_02325at 494.449 kb on - strand, within AO353_02325at 494.449 kb on - strand, within AO353_02325at 494.449 kb on - strand, within AO353_02325at 494.449 kb on - strand, within AO353_02325at 494.449 kb on - strand, within AO353_02325at 494.449 kb on - strand, within AO353_02325at 494.449 kb on - strand, within AO353_02325at 494.669 kb on + strand, within AO353_02325at 494.724 kb on + strand, within AO353_02325at 494.762 kb on - strand, within AO353_02325at 494.878 kb on + strandat 494.959 kb on + strandat 494.959 kb on + strandat 494.960 kb on - strandat 494.960 kb on - strandat 494.963 kb on + strandat 494.963 kb on + strandat 494.964 kb on - strandat 494.990 kb on + strandat 494.990 kb on + strandat 494.991 kb on - strandat 494.991 kb on - strandat 494.997 kb on + strandat 494.997 kb on + strandat 494.998 kb on - strandat 495.189 kb on - strand, within AO353_02330at 495.270 kb on - strand, within AO353_02330at 495.435 kb on - strand, within AO353_02330at 495.467 kb on + strand, within AO353_02330at 495.468 kb on - strand, within AO353_02330at 495.616 kb on + strand, within AO353_02330at 495.617 kb on - strand, within AO353_02330

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Per-strain Table

Position Strand Gene LocusTag Fraction Gly-Glu (N)
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493,422 + -0.5
493,422 + -1.8
493,422 + +0.8
493,422 + -0.8
493,422 + -0.4
493,422 + -0.1
493,422 + -0.4
493,423 - -0.5
493,423 - -0.0
493,423 - -0.7
493,423 - -0.3
493,426 + -0.5
493,426 + +1.5
493,426 + -0.9
493,426 + -1.1
493,427 - -0.1
493,427 - +0.1
493,436 + +1.8
493,436 + +0.2
493,436 + -0.4
493,555 + AO353_02320 0.11 -1.6
493,555 + AO353_02320 0.11 -0.8
493,556 - AO353_02320 0.11 +0.5
493,556 - AO353_02320 0.11 -1.6
493,676 - AO353_02320 0.24 -0.9
493,682 - AO353_02320 0.25 +1.7
493,682 - AO353_02320 0.25 +1.1
493,849 + AO353_02320 0.43 +0.9
493,855 + AO353_02320 0.43 -0.5
493,855 + AO353_02320 0.43 -0.6
493,855 + AO353_02320 0.43 -0.4
493,855 + AO353_02320 0.43 +1.3
493,855 + AO353_02320 0.43 -0.1
493,855 + AO353_02320 0.43 +0.2
493,855 + AO353_02320 0.43 -0.8
493,855 + AO353_02320 0.43 -0.8
493,855 + AO353_02320 0.43 -1.2
493,856 - AO353_02320 0.43 -0.1
493,856 - AO353_02320 0.43 +0.3
493,856 - AO353_02320 0.43 +0.4
493,856 - AO353_02320 0.43 -0.0
493,942 + AO353_02320 0.53 -1.2
493,943 - AO353_02320 0.53 +0.8
494,003 - AO353_02320 0.59 +0.5
494,003 - AO353_02320 0.59 +1.1
494,017 + AO353_02320 0.61 -1.1
494,017 + AO353_02320 0.61 -0.1
494,018 - AO353_02320 0.61 -1.6
494,018 - AO353_02320 0.61 +0.5
494,018 - AO353_02320 0.61 +1.6
494,018 - AO353_02320 0.61 -1.2
494,018 - AO353_02320 0.61 +0.5
494,018 - AO353_02320 0.61 +0.9
494,018 - AO353_02320 0.61 -0.3
494,019 - AO353_02320 0.61 -0.2
494,083 + AO353_02320 0.68 -0.4
494,084 - AO353_02320 0.68 -1.5
494,150 - AO353_02320 0.75 -0.3
494,155 + AO353_02320 0.76 -0.1
494,155 + AO353_02320 0.76 +0.1
494,156 - AO353_02320 0.76 -1.4
494,182 + AO353_02320 0.79 -2.3
494,448 + AO353_02325 0.14 -0.7
494,448 + AO353_02325 0.14 -0.1
494,448 + AO353_02325 0.14 +1.2
494,448 + AO353_02325 0.14 +0.6
494,448 + AO353_02325 0.14 -0.8
494,448 + AO353_02325 0.14 +1.5
494,448 + AO353_02325 0.14 +0.5
494,449 - AO353_02325 0.14 -0.3
494,449 - AO353_02325 0.14 +1.6
494,449 - AO353_02325 0.14 -0.6
494,449 - AO353_02325 0.14 +1.0
494,449 - AO353_02325 0.14 -0.0
494,449 - AO353_02325 0.14 +1.0
494,449 - AO353_02325 0.14 +0.5
494,669 + AO353_02325 0.57 -0.4
494,724 + AO353_02325 0.67 -0.5
494,762 - AO353_02325 0.75 -1.3
494,878 + -0.2
494,959 + -0.5
494,959 + +0.9
494,960 - -0.2
494,960 - -1.0
494,963 + -0.5
494,963 + -0.2
494,964 - -0.6
494,990 + -2.1
494,990 + +0.6
494,991 - -0.6
494,991 - -0.3
494,997 + +0.5
494,997 + +1.7
494,998 - +0.5
495,189 - AO353_02330 0.21 -0.6
495,270 - AO353_02330 0.29 +0.8
495,435 - AO353_02330 0.46 +0.5
495,467 + AO353_02330 0.49 -0.6
495,468 - AO353_02330 0.49 -1.6
495,616 + AO353_02330 0.64 +0.6
495,617 - AO353_02330 0.64 -0.3

Or see this region's nucleotide sequence