Experiment: Gly-Glu (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00375 and AO353_00380 are separated by 94 nucleotides AO353_00380 and AO353_00385 are separated by 13 nucleotides AO353_00385 and AO353_00390 are separated by 42 nucleotides
AO353_00375: AO353_00375 - cell division protein FtsX, at 68,303 to 69,553
_00375
AO353_00380: AO353_00380 - pilus assembly protein PilZ, at 69,648 to 70,232
_00380
AO353_00385: AO353_00385 - glycerophosphodiester phosphodiesterase, at 70,246 to 70,968
_00385
AO353_00390: AO353_00390 - pyridine nucleotide-disulfide oxidoreductase, at 71,011 to 72,405
_00390
Position (kb)
70
71 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 69.614 kb on - strand at 69.614 kb on - strand at 69.614 kb on - strand at 69.659 kb on - strand at 69.659 kb on - strand at 69.659 kb on - strand at 69.659 kb on - strand at 69.659 kb on - strand at 69.659 kb on - strand at 69.685 kb on - strand at 69.685 kb on - strand at 69.685 kb on - strand at 69.867 kb on + strand, within AO353_00380 at 69.867 kb on + strand, within AO353_00380 at 69.867 kb on + strand, within AO353_00380 at 69.868 kb on - strand, within AO353_00380 at 69.868 kb on - strand, within AO353_00380 at 69.868 kb on - strand, within AO353_00380 at 70.167 kb on + strand, within AO353_00380 at 70.168 kb on - strand, within AO353_00380 at 70.169 kb on + strand, within AO353_00380 at 70.169 kb on + strand, within AO353_00380 at 70.169 kb on + strand, within AO353_00380 at 70.169 kb on + strand, within AO353_00380 at 70.169 kb on + strand, within AO353_00380 at 70.169 kb on + strand, within AO353_00380 at 70.169 kb on + strand, within AO353_00380 at 70.169 kb on + strand, within AO353_00380 at 70.169 kb on + strand, within AO353_00380 at 70.169 kb on + strand, within AO353_00380 at 70.170 kb on - strand, within AO353_00380 at 70.170 kb on - strand, within AO353_00380 at 70.170 kb on - strand, within AO353_00380 at 70.170 kb on - strand, within AO353_00380 at 70.170 kb on - strand, within AO353_00380 at 70.170 kb on - strand, within AO353_00380 at 70.170 kb on - strand, within AO353_00380 at 70.170 kb on - strand, within AO353_00380 at 70.170 kb on - strand, within AO353_00380 at 70.170 kb on - strand, within AO353_00380 at 70.170 kb on - strand, within AO353_00380 at 70.170 kb on - strand, within AO353_00380 at 70.170 kb on - strand, within AO353_00380 at 70.170 kb on - strand, within AO353_00380 at 70.170 kb on - strand, within AO353_00380 at 70.230 kb on + strand at 70.231 kb on - strand at 70.231 kb on - strand at 70.231 kb on - strand at 70.231 kb on - strand at 70.234 kb on + strand at 70.235 kb on - strand at 70.235 kb on - strand at 70.235 kb on - strand at 70.235 kb on - strand at 70.235 kb on - strand at 70.253 kb on + strand at 70.253 kb on + strand at 70.254 kb on - strand at 70.258 kb on + strand at 70.258 kb on + strand at 70.259 kb on - strand at 70.335 kb on - strand, within AO353_00385 at 70.465 kb on + strand, within AO353_00385 at 70.465 kb on + strand, within AO353_00385 at 70.465 kb on + strand, within AO353_00385 at 70.466 kb on - strand, within AO353_00385 at 70.466 kb on - strand, within AO353_00385 at 70.466 kb on - strand, within AO353_00385 at 70.562 kb on + strand, within AO353_00385 at 70.562 kb on + strand, within AO353_00385 at 70.563 kb on - strand, within AO353_00385 at 70.563 kb on - strand at 70.735 kb on + strand, within AO353_00385 at 70.735 kb on + strand, within AO353_00385 at 70.735 kb on + strand, within AO353_00385 at 70.736 kb on - strand, within AO353_00385 at 70.736 kb on - strand, within AO353_00385 at 70.771 kb on + strand, within AO353_00385 at 70.771 kb on + strand, within AO353_00385 at 70.923 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (N) remove 69,614 - -1.5 69,614 - +2.2 69,614 - +0.2 69,659 - +0.1 69,659 - -0.6 69,659 - -1.1 69,659 - +1.2 69,659 - -1.2 69,659 - +1.1 69,685 - +0.1 69,685 - +0.3 69,685 - -0.6 69,867 + AO353_00380 0.37 +0.8 69,867 + AO353_00380 0.37 -0.1 69,867 + AO353_00380 0.37 -1.1 69,868 - AO353_00380 0.38 -0.0 69,868 - AO353_00380 0.38 -0.6 69,868 - AO353_00380 0.38 +0.2 70,167 + AO353_00380 0.89 -1.1 70,168 - AO353_00380 0.89 -0.5 70,169 + AO353_00380 0.89 -0.6 70,169 + AO353_00380 0.89 -1.4 70,169 + AO353_00380 0.89 -1.8 70,169 + AO353_00380 0.89 -0.8 70,169 + AO353_00380 0.89 -0.1 70,169 + AO353_00380 0.89 -0.4 70,169 + AO353_00380 0.89 -0.6 70,169 + AO353_00380 0.89 -0.6 70,169 + AO353_00380 0.89 +0.0 70,169 + AO353_00380 0.89 -0.4 70,170 - AO353_00380 0.89 -0.9 70,170 - AO353_00380 0.89 -1.6 70,170 - AO353_00380 0.89 -0.6 70,170 - AO353_00380 0.89 +0.8 70,170 - AO353_00380 0.89 +0.4 70,170 - AO353_00380 0.89 +0.6 70,170 - AO353_00380 0.89 -1.5 70,170 - AO353_00380 0.89 +1.0 70,170 - AO353_00380 0.89 +0.6 70,170 - AO353_00380 0.89 -0.4 70,170 - AO353_00380 0.89 -0.3 70,170 - AO353_00380 0.89 +1.0 70,170 - AO353_00380 0.89 -2.2 70,170 - AO353_00380 0.89 -1.0 70,170 - AO353_00380 0.89 +0.5 70,230 + +0.7 70,231 - -1.1 70,231 - -0.4 70,231 - -0.2 70,231 - -0.9 70,234 + -0.9 70,235 - +0.5 70,235 - +0.7 70,235 - +0.9 70,235 - -0.9 70,235 - -0.4 70,253 + -0.8 70,253 + -0.1 70,254 - +1.3 70,258 + +0.5 70,258 + +0.6 70,259 - +0.6 70,335 - AO353_00385 0.12 +1.2 70,465 + AO353_00385 0.30 +0.2 70,465 + AO353_00385 0.30 +1.2 70,465 + AO353_00385 0.30 +0.6 70,466 - AO353_00385 0.30 +0.4 70,466 - AO353_00385 0.30 -0.9 70,466 - AO353_00385 0.30 -2.5 70,562 + AO353_00385 0.44 +0.9 70,562 + AO353_00385 0.44 +0.4 70,563 - AO353_00385 0.44 +1.1 70,563 - -0.6 70,735 + AO353_00385 0.68 -0.6 70,735 + AO353_00385 0.68 +0.2 70,735 + AO353_00385 0.68 +1.0 70,736 - AO353_00385 0.68 +0.7 70,736 - AO353_00385 0.68 +1.2 70,771 + AO353_00385 0.73 +0.6 70,771 + AO353_00385 0.73 -1.2 70,923 + -0.0
Or see this region's nucleotide sequence