Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20830

Experiment: Gly-DL-Asp (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gly-DL-Asp (N)
4,560,773	+				+0.1
4,560,773	+				-1.0
4,560,773	+				-0.6
4,560,774	-				+2.1
4,560,774	-				+2.8
4,560,798	+				-0.9
4,560,798	+				-1.3
4,560,798	+				-0.4
4,560,798	+				-0.3
4,560,798	+				-0.8
4,560,798	+				-1.0
4,560,798	+				-0.2
4,560,798	+				-0.6
4,560,799	-				+3.1
4,560,799	-				+3.5
4,560,799	-				+2.4
4,560,799	-				+2.7
4,560,799	-				+3.6
4,560,799	-				+4.2
4,560,801	+				-0.6
4,560,801	+				+0.4
4,560,801	+				-1.1
4,560,801	+				-1.2
4,560,802	-				+2.7
4,560,802	-				+2.6
4,560,826	+				-0.6
4,560,826	+				-2.0
4,560,826	+				-0.7
4,560,826	+				-0.7
4,560,826	+				-1.6
4,560,826	+				-0.3
4,560,826	+				-1.7
4,560,826	+				-2.2
4,560,826	+				-1.1
4,560,827	-				+2.8
4,560,827	-				+0.6
4,560,827	-				+3.6
4,560,827	-				+3.8
4,560,898	+		AO353_20825	0.13	+1.0
4,560,898	+		AO353_20825	0.13	-1.7
4,560,898	+		AO353_20825	0.13	-1.1
4,560,898	+		AO353_20825	0.13	-0.6
4,560,899	-		AO353_20825	0.13	+3.2
4,560,899	-		AO353_20825	0.13	+3.2
4,560,899	-		AO353_20825	0.13	+3.1
4,560,899	-		AO353_20825	0.13	+2.2
4,560,899	-		AO353_20825	0.13	+3.2
4,560,899	-		AO353_20825	0.13	+3.5
4,560,899	-		AO353_20825	0.13	+4.6
4,560,899	-		AO353_20825	0.13	+3.7
4,561,225	+		AO353_20825	0.47	-1.7
4,561,225	+		AO353_20825	0.47	-0.4
4,561,225	+		AO353_20825	0.47	-0.8
4,561,225	+				+0.8
4,561,225	+		AO353_20825	0.47	-2.2
4,561,225	+		AO353_20825	0.47	-0.6
4,561,225	+		AO353_20825	0.47	-1.4
4,561,226	-		AO353_20825	0.47	+3.6
4,561,226	-		AO353_20825	0.47	+2.5
4,561,226	-		AO353_20825	0.47	+3.6
4,561,226	-		AO353_20825	0.47	+4.4
4,561,226	-		AO353_20825	0.47	+2.7
4,561,226	-		AO353_20825	0.47	+3.8
4,561,226	-		AO353_20825	0.47	+4.5
4,561,272	+		AO353_20825	0.51	-0.1
4,561,272	+		AO353_20825	0.51	-0.9
4,561,273	-		AO353_20825	0.52	+4.1
4,561,273	-		AO353_20825	0.52	+3.8
4,561,305	+		AO353_20825	0.55	-1.0
4,561,306	-		AO353_20825	0.55	+4.8
4,561,415	-		AO353_20825	0.66	+3.0
4,561,523	+		AO353_20825	0.77	-0.5
4,561,523	+		AO353_20825	0.77	-0.8
4,561,524	-		AO353_20825	0.77	+5.6
4,561,524	-		AO353_20825	0.77	+2.3
4,561,714	+				+0.7
4,561,715	-				+4.0
4,561,715	-				+4.8
4,561,769	+				+2.8
4,561,769	+				+5.2
4,561,769	+				+5.5
4,561,769	+				+5.0
4,561,769	+				+3.0
4,561,769	+				+5.1
4,561,769	+				+4.6
4,561,769	+				+5.1
4,561,770	-				+4.3
4,561,770	-				+3.5
4,561,770	-				+4.7
4,561,770	-				+4.2
4,561,770	-				+5.5
4,561,770	-				+3.0
4,561,770	-				+4.9
4,561,770	-				+5.0
4,561,770	-				+5.0
4,561,770	-				+2.5
4,561,792	+				+5.2
4,561,792	+				+4.8
4,561,792	+				+5.7
4,561,793	-				+3.7
4,561,793	-				+4.8
4,561,882	+		AO353_20830	0.13	+4.8
4,561,883	-		AO353_20830	0.13	+4.7
4,561,883	-		AO353_20830	0.13	+4.4
4,561,883	-		AO353_20830	0.13	+4.4
4,561,932	+		AO353_20830	0.18	+5.5
4,561,933	-		AO353_20830	0.18	+4.3
4,561,933	-		AO353_20830	0.18	+5.4
4,561,933	-		AO353_20830	0.18	+6.1
4,561,990	-		AO353_20830	0.24	+5.2
4,562,000	-		AO353_20830	0.25	+4.7
4,562,000	-		AO353_20830	0.25	+5.3
4,562,068	+		AO353_20830	0.31	+4.4
4,562,068	+		AO353_20830	0.31	+5.0
4,562,192	+		AO353_20830	0.43	+3.2
4,562,216	+		AO353_20830	0.46	+5.1
4,562,217	-		AO353_20830	0.46	+4.6
4,562,234	-		AO353_20830	0.47	+4.5
4,562,234	-		AO353_20830	0.47	+3.3
4,562,242	+		AO353_20830	0.48	+6.1
4,562,243	-		AO353_20830	0.48	+4.9
4,562,243	-		AO353_20830	0.48	+4.4
4,562,243	-		AO353_20830	0.48	+4.8
4,562,243	-		AO353_20830	0.48	+4.7
4,562,243	-		AO353_20830	0.48	+5.2
4,562,243	-		AO353_20830	0.48	+5.2
4,562,292	+		AO353_20830	0.53	+4.8
4,562,292	+		AO353_20830	0.53	+5.1
4,562,310	+		AO353_20830	0.55	+5.3
4,562,310	+		AO353_20830	0.55	+4.6
4,562,310	+		AO353_20830	0.55	+4.4
4,562,310	+		AO353_20830	0.55	+3.1
4,562,311	-		AO353_20830	0.55	+4.1
4,562,311	-		AO353_20830	0.55	+5.5
4,562,311	-		AO353_20830	0.55	+4.9
4,562,311	-		AO353_20830	0.55	+4.8
4,562,311	-		AO353_20830	0.55	+2.9
4,562,311	-		AO353_20830	0.55	+5.1
4,562,501	+		AO353_20830	0.74	+5.1
4,562,584	+		AO353_20830	0.82	+4.7
4,562,584	+		AO353_20830	0.82	+4.7
4,562,584	+		AO353_20830	0.82	+4.8
4,562,585	-		AO353_20830	0.82	+4.8
4,562,585	-		AO353_20830	0.82	+4.8
4,562,651	+		AO353_20830	0.88	+5.2
4,562,652	-		AO353_20830	0.88	+3.9
4,562,751	-				+4.2
4,562,751	-				+3.7
4,562,784	+				+0.1
4,562,792	+				+4.2
4,562,792	+				+1.7
4,562,792	+				+1.3
4,562,792	+				-1.3
4,562,792	+				+0.3
4,562,792	+				+0.2
4,562,792	+				+1.1
4,562,792	+				+0.8
4,562,792	+				-0.3
4,562,792	+				+2.0
4,562,792	+				+0.9
4,562,792	+				+1.4
4,562,792	+				+2.0
4,562,792	+				+1.5
4,562,792	+				+1.0
4,562,792	+				+1.3
4,562,792	+				+1.0
4,562,792	+				+0.9
4,562,793	-				+5.1
4,562,793	-				+5.1
4,562,793	-				+4.8
4,562,793	-				+4.5
4,562,793	-				+4.4
4,562,793	-				+5.5
4,562,793	-				+6.4
4,562,793	-				+4.7
4,562,793	-				+4.6
4,562,793	-				+5.2
4,562,793	-				+4.7
4,562,793	-				+4.4
4,562,793	-				+4.6
4,562,807	-				+5.9
4,562,815	+				+5.3
4,562,815	+				+3.0
4,562,815	+				+4.9
4,562,816	-				+3.6
4,562,816	-				+6.3
4,562,816	-				+4.9
4,562,816	-				+6.3
4,562,816	-				+5.5
4,562,816	-				+5.3
4,563,234	+		AO353_20835	0.48	+4.5
4,563,234	+		AO353_20835	0.48	+5.2
4,563,234	+		AO353_20835	0.48	+5.5
4,563,235	-		AO353_20835	0.48	+5.4
4,563,235	-		AO353_20835	0.48	+4.5
4,563,235	-		AO353_20835	0.48	+6.6
4,563,235	-		AO353_20835	0.48	+5.1
4,563,235	-		AO353_20835	0.48	+4.7
4,563,235	-		AO353_20835	0.48	+5.4
4,563,333	+		AO353_20835	0.59	+4.9
4,563,333	+		AO353_20835	0.59	+5.2
4,563,333	+		AO353_20835	0.59	+5.9
4,563,688	+				+1.0
4,563,689	-				+1.7
4,563,689	-				+2.6
4,563,689	-				+3.0