Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_20805 and AO353_20810 are separated by 351 nucleotides AO353_20810 and AO353_20815 are separated by 235 nucleotides
AO353_20805: AO353_20805 - glutaminase, at 4,556,077 to 4,557,165
_20805
AO353_20810: AO353_20810 - hypothetical protein, at 4,557,517 to 4,557,972
_20810
AO353_20815: AO353_20815 - LacI family transcriptional regulator, at 4,558,208 to 4,559,161
_20815
Position (kb)
4557
4558 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4556.646 kb on + strand, within AO353_20805 at 4556.669 kb on + strand, within AO353_20805 at 4556.669 kb on + strand, within AO353_20805 at 4556.669 kb on + strand, within AO353_20805 at 4556.768 kb on + strand, within AO353_20805 at 4556.768 kb on + strand, within AO353_20805 at 4556.768 kb on + strand, within AO353_20805 at 4556.768 kb on + strand, within AO353_20805 at 4556.769 kb on - strand, within AO353_20805 at 4556.769 kb on - strand, within AO353_20805 at 4556.802 kb on + strand, within AO353_20805 at 4556.802 kb on + strand, within AO353_20805 at 4556.802 kb on + strand, within AO353_20805 at 4556.802 kb on + strand, within AO353_20805 at 4556.802 kb on + strand, within AO353_20805 at 4556.803 kb on - strand, within AO353_20805 at 4556.990 kb on + strand, within AO353_20805 at 4556.990 kb on + strand, within AO353_20805 at 4556.991 kb on - strand, within AO353_20805 at 4556.991 kb on - strand, within AO353_20805 at 4556.994 kb on + strand, within AO353_20805 at 4556.994 kb on + strand, within AO353_20805 at 4556.994 kb on + strand, within AO353_20805 at 4556.994 kb on + strand, within AO353_20805 at 4556.994 kb on + strand, within AO353_20805 at 4556.994 kb on + strand, within AO353_20805 at 4556.994 kb on + strand, within AO353_20805 at 4556.994 kb on + strand, within AO353_20805 at 4556.994 kb on + strand, within AO353_20805 at 4556.994 kb on + strand, within AO353_20805 at 4556.994 kb on + strand, within AO353_20805 at 4556.995 kb on - strand at 4556.995 kb on - strand, within AO353_20805 at 4556.995 kb on - strand, within AO353_20805 at 4556.995 kb on - strand, within AO353_20805 at 4557.000 kb on + strand, within AO353_20805 at 4557.000 kb on + strand, within AO353_20805 at 4557.000 kb on + strand, within AO353_20805 at 4557.000 kb on + strand, within AO353_20805 at 4557.001 kb on - strand, within AO353_20805 at 4557.001 kb on - strand, within AO353_20805 at 4557.142 kb on - strand at 4557.142 kb on - strand at 4557.178 kb on - strand at 4557.180 kb on + strand at 4557.180 kb on + strand at 4557.180 kb on + strand at 4557.180 kb on + strand at 4557.180 kb on + strand at 4557.180 kb on + strand at 4557.181 kb on - strand at 4557.210 kb on + strand at 4557.210 kb on + strand at 4557.210 kb on + strand at 4557.210 kb on + strand at 4557.210 kb on + strand at 4557.210 kb on + strand at 4557.211 kb on - strand at 4557.211 kb on - strand at 4557.233 kb on + strand at 4557.233 kb on + strand at 4557.234 kb on - strand at 4557.234 kb on - strand at 4557.320 kb on + strand at 4557.371 kb on + strand at 4557.371 kb on + strand at 4557.371 kb on + strand at 4557.371 kb on + strand at 4557.372 kb on - strand at 4557.408 kb on + strand at 4557.408 kb on + strand at 4557.409 kb on - strand at 4557.409 kb on - strand at 4557.409 kb on - strand at 4557.415 kb on + strand at 4557.415 kb on + strand at 4557.415 kb on + strand at 4557.415 kb on + strand at 4557.415 kb on + strand at 4557.416 kb on - strand at 4557.416 kb on - strand at 4557.416 kb on - strand at 4557.421 kb on + strand at 4557.422 kb on - strand at 4557.450 kb on + strand at 4557.450 kb on + strand at 4557.450 kb on + strand at 4557.451 kb on - strand at 4557.451 kb on - strand at 4557.451 kb on - strand at 4557.451 kb on - strand at 4557.516 kb on + strand at 4557.516 kb on + strand at 4557.516 kb on + strand at 4557.516 kb on + strand at 4557.516 kb on + strand at 4557.516 kb on + strand at 4557.516 kb on + strand at 4557.516 kb on + strand at 4557.516 kb on + strand at 4557.516 kb on + strand at 4557.516 kb on + strand at 4557.516 kb on + strand at 4557.516 kb on + strand at 4557.516 kb on + strand at 4557.516 kb on + strand at 4557.516 kb on + strand at 4557.517 kb on - strand at 4557.517 kb on - strand at 4557.517 kb on - strand at 4557.517 kb on - strand at 4557.517 kb on - strand at 4557.517 kb on - strand at 4557.517 kb on - strand at 4557.517 kb on - strand at 4557.517 kb on - strand at 4557.517 kb on - strand at 4557.517 kb on - strand at 4557.517 kb on - strand at 4557.517 kb on - strand at 4557.517 kb on - strand at 4557.517 kb on - strand at 4557.517 kb on - strand at 4557.517 kb on - strand at 4557.517 kb on - strand at 4557.528 kb on + strand at 4557.567 kb on + strand, within AO353_20810 at 4557.567 kb on + strand, within AO353_20810 at 4557.675 kb on - strand, within AO353_20810 at 4557.821 kb on - strand, within AO353_20810 at 4557.970 kb on + strand at 4557.971 kb on - strand at 4558.051 kb on + strand at 4558.051 kb on + strand at 4558.052 kb on - strand at 4558.052 kb on - strand at 4558.061 kb on + strand at 4558.159 kb on + strand at 4558.159 kb on + strand at 4558.184 kb on + strand at 4558.184 kb on + strand at 4558.185 kb on - strand at 4558.185 kb on - strand at 4558.185 kb on - strand at 4558.185 kb on - strand at 4558.185 kb on - strand at 4558.185 kb on - strand at 4558.185 kb on - strand at 4558.191 kb on - strand at 4558.191 kb on - strand at 4558.191 kb on - strand at 4558.191 kb on - strand at 4558.191 kb on - strand at 4558.246 kb on + strand at 4558.635 kb on + strand, within AO353_20815 at 4558.636 kb on - strand, within AO353_20815 at 4558.676 kb on + strand, within AO353_20815 at 4558.676 kb on + strand, within AO353_20815 at 4558.677 kb on - strand, within AO353_20815 at 4558.677 kb on - strand, within AO353_20815 at 4558.834 kb on + strand, within AO353_20815 at 4558.860 kb on + strand, within AO353_20815
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 4,556,646 + AO353_20805 0.52 -0.2 4,556,669 + AO353_20805 0.54 -0.8 4,556,669 + AO353_20805 0.54 +0.6 4,556,669 + AO353_20805 0.54 -1.3 4,556,768 + AO353_20805 0.63 -0.7 4,556,768 + AO353_20805 0.63 -0.9 4,556,768 + AO353_20805 0.63 +0.5 4,556,768 + AO353_20805 0.63 -1.3 4,556,769 - AO353_20805 0.64 -0.2 4,556,769 - AO353_20805 0.64 -0.6 4,556,802 + AO353_20805 0.67 -2.6 4,556,802 + AO353_20805 0.67 +0.3 4,556,802 + AO353_20805 0.67 -1.8 4,556,802 + AO353_20805 0.67 -0.2 4,556,802 + AO353_20805 0.67 +0.8 4,556,803 - AO353_20805 0.67 -0.8 4,556,990 + AO353_20805 0.84 +0.9 4,556,990 + AO353_20805 0.84 +0.6 4,556,991 - AO353_20805 0.84 -0.3 4,556,991 - AO353_20805 0.84 -1.3 4,556,994 + AO353_20805 0.84 -1.3 4,556,994 + AO353_20805 0.84 -1.7 4,556,994 + AO353_20805 0.84 +0.4 4,556,994 + AO353_20805 0.84 -0.3 4,556,994 + AO353_20805 0.84 -0.8 4,556,994 + AO353_20805 0.84 -1.8 4,556,994 + AO353_20805 0.84 -1.5 4,556,994 + AO353_20805 0.84 -0.4 4,556,994 + AO353_20805 0.84 -1.1 4,556,994 + AO353_20805 0.84 -1.5 4,556,994 + AO353_20805 0.84 -0.9 4,556,995 - -0.2 4,556,995 - AO353_20805 0.84 +0.1 4,556,995 - AO353_20805 0.84 +2.8 4,556,995 - AO353_20805 0.84 -0.9 4,557,000 + AO353_20805 0.85 +0.1 4,557,000 + AO353_20805 0.85 -0.4 4,557,000 + AO353_20805 0.85 +0.5 4,557,000 + AO353_20805 0.85 +0.4 4,557,001 - AO353_20805 0.85 -0.4 4,557,001 - AO353_20805 0.85 -1.1 4,557,142 - -1.3 4,557,142 - -1.6 4,557,178 - +0.1 4,557,180 + -1.2 4,557,180 + -0.9 4,557,180 + +0.5 4,557,180 + -0.3 4,557,180 + -0.4 4,557,180 + +0.2 4,557,181 - -0.7 4,557,210 + +0.2 4,557,210 + -0.6 4,557,210 + -0.1 4,557,210 + -2.5 4,557,210 + -0.7 4,557,210 + -1.8 4,557,211 - +0.3 4,557,211 - -0.9 4,557,233 + -1.3 4,557,233 + -0.4 4,557,234 - -1.0 4,557,234 - +0.3 4,557,320 + +0.6 4,557,371 + -1.6 4,557,371 + -0.8 4,557,371 + -0.4 4,557,371 + -0.1 4,557,372 - -0.4 4,557,408 + -0.2 4,557,408 + +0.1 4,557,409 - -1.4 4,557,409 - +0.7 4,557,409 - +0.8 4,557,415 + -0.1 4,557,415 + +0.8 4,557,415 + -1.5 4,557,415 + +0.1 4,557,415 + -0.4 4,557,416 - +0.8 4,557,416 - +0.9 4,557,416 - -0.7 4,557,421 + -2.3 4,557,422 - -0.4 4,557,450 + -0.9 4,557,450 + -0.9 4,557,450 + -0.6 4,557,451 - -0.8 4,557,451 - -0.9 4,557,451 - -1.3 4,557,451 - +0.2 4,557,516 + +0.1 4,557,516 + +0.3 4,557,516 + -1.5 4,557,516 + +0.4 4,557,516 + -0.1 4,557,516 + +1.6 4,557,516 + -0.2 4,557,516 + +0.1 4,557,516 + -0.3 4,557,516 + -0.5 4,557,516 + -0.1 4,557,516 + +1.7 4,557,516 + +1.1 4,557,516 + -0.1 4,557,516 + -0.4 4,557,516 + -1.3 4,557,517 - -1.0 4,557,517 - -0.9 4,557,517 - -1.5 4,557,517 - -0.5 4,557,517 - -0.5 4,557,517 - -1.3 4,557,517 - +1.5 4,557,517 - +0.0 4,557,517 - +1.1 4,557,517 - -0.4 4,557,517 - +0.8 4,557,517 - -1.5 4,557,517 - -1.1 4,557,517 - +1.0 4,557,517 - +1.1 4,557,517 - -0.9 4,557,517 - -1.1 4,557,517 - +0.4 4,557,528 + +0.3 4,557,567 + AO353_20810 0.11 +0.4 4,557,567 + AO353_20810 0.11 -1.0 4,557,675 - AO353_20810 0.35 -0.8 4,557,821 - AO353_20810 0.67 -0.9 4,557,970 + -0.2 4,557,971 - -1.5 4,558,051 + -0.5 4,558,051 + -0.8 4,558,052 - -1.2 4,558,052 - +0.4 4,558,061 + +1.1 4,558,159 + +1.0 4,558,159 + +0.9 4,558,184 + -1.6 4,558,184 + -0.4 4,558,185 - -0.7 4,558,185 - -0.0 4,558,185 - +0.2 4,558,185 - -1.9 4,558,185 - -1.9 4,558,185 - -1.0 4,558,185 - -0.5 4,558,191 - -0.3 4,558,191 - +1.1 4,558,191 - +1.1 4,558,191 - -1.4 4,558,191 - +0.2 4,558,246 + -1.2 4,558,635 + AO353_20815 0.45 -0.9 4,558,636 - AO353_20815 0.45 -0.1 4,558,676 + AO353_20815 0.49 -0.3 4,558,676 + AO353_20815 0.49 -0.8 4,558,677 - AO353_20815 0.49 -0.3 4,558,677 - AO353_20815 0.49 +0.1 4,558,834 + AO353_20815 0.66 +0.1 4,558,860 + AO353_20815 0.68 -0.9
Or see this region's nucleotide sequence