Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19830

Experiment: Gly-DL-Asp (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gly-DL-Asp (N)
4,358,116	+				+0.3
4,358,116	+				-0.2
4,358,116	+				+0.2
4,358,116	+				+0.3
4,358,117	-				+0.3
4,358,117	-				-0.9
4,358,117	-				-1.1
4,358,117	-				-0.6
4,358,120	+				-1.6
4,358,120	+				+1.5
4,358,120	+				-0.9
4,358,120	+				+0.6
4,358,120	+				+0.0
4,358,120	+				-1.7
4,358,120	+				+0.3
4,358,121	-				+4.3
4,358,121	-				-0.2
4,358,121	-				-1.1
4,358,121	-				-1.3
4,358,121	-				-0.5
4,358,121	-				-1.1
4,358,121	-				+0.8
4,358,127	+				+1.6
4,358,127	+				-0.5
4,358,127	+				-0.6
4,358,128	-				-0.4
4,358,148	+				-0.5
4,358,149	-				+0.5
4,358,149	-				-0.1
4,358,149	-				+0.1
4,358,149	-				-1.0
4,358,149	-				-1.4
4,358,149	-				-1.4
4,358,154	+				-0.1
4,358,154	+				+1.0
4,358,154	+				-1.2
4,358,155	-				-1.6
4,358,155	-				-0.5
4,358,155	-				-1.7
4,358,155	-				-0.9
4,358,182	+				+0.6
4,358,183	-				+0.5
4,358,268	+				+0.1
4,358,341	+		AO353_19825	0.11	+0.6
4,358,341	+		AO353_19825	0.11	-0.5
4,358,341	+		AO353_19825	0.11	-0.6
4,358,342	-		AO353_19825	0.11	+1.5
4,358,342	-		AO353_19825	0.11	-1.2
4,358,365	+		AO353_19825	0.14	-0.3
4,358,365	+		AO353_19825	0.14	-1.5
4,358,366	-				+1.1
4,358,366	-		AO353_19825	0.14	+0.2
4,358,368	+		AO353_19825	0.14	+1.1
4,358,368	+		AO353_19825	0.14	-0.4
4,358,368	+		AO353_19825	0.14	-0.5
4,358,369	-		AO353_19825	0.14	-1.0
4,358,369	-		AO353_19825	0.14	+0.3
4,358,369	-		AO353_19825	0.14	-1.1
4,358,369	-		AO353_19825	0.14	-0.3
4,358,369	-		AO353_19825	0.14	+1.1
4,358,369	-		AO353_19825	0.14	-0.6
4,358,369	-		AO353_19825	0.14	-0.2
4,358,369	-		AO353_19825	0.14	-1.0
4,358,523	+		AO353_19825	0.33	+0.3
4,358,523	+		AO353_19825	0.33	-0.0
4,358,523	+		AO353_19825	0.33	-1.2
4,358,524	-		AO353_19825	0.33	+0.9
4,358,524	-		AO353_19825	0.33	-0.6
4,358,557	+		AO353_19825	0.37	+0.9
4,358,557	+		AO353_19825	0.37	-1.0
4,358,557	+		AO353_19825	0.37	-0.4
4,358,557	+		AO353_19825	0.37	+0.7
4,358,557	+		AO353_19825	0.37	-0.1
4,358,558	-		AO353_19825	0.37	-1.9
4,358,558	-		AO353_19825	0.37	-0.4
4,358,558	-		AO353_19825	0.37	+0.5
4,358,558	-		AO353_19825	0.37	-0.1
4,358,558	-		AO353_19825	0.37	-0.9
4,358,558	-		AO353_19825	0.37	+0.7
4,358,569	+				+0.6
4,358,569	+		AO353_19825	0.39	+0.1
4,358,569	+		AO353_19825	0.39	+0.5
4,358,570	-		AO353_19825	0.39	+0.6
4,358,570	-		AO353_19825	0.39	+1.0
4,358,687	-		AO353_19825	0.53	+0.2
4,359,008	-				-0.6
4,359,258	+		AO353_19830	0.25	-1.2
4,359,258	+		AO353_19830	0.25	-0.1
4,359,258	+		AO353_19830	0.25	+0.5
4,359,259	-		AO353_19830	0.25	-1.6
4,359,259	-		AO353_19830	0.25	-1.0
4,359,259	-		AO353_19830	0.25	+0.6
4,359,436	+		AO353_19830	0.52	-0.5
4,359,436	+		AO353_19830	0.52	-0.5
4,359,437	-		AO353_19830	0.52	-0.9
4,359,437	-		AO353_19830	0.52	-0.9
4,359,626	-		AO353_19830	0.81	-1.6
4,359,639	+		AO353_19830	0.83	-0.9
4,359,639	+		AO353_19830	0.83	-2.0
4,359,639	+		AO353_19830	0.83	+0.5
4,359,640	-		AO353_19830	0.84	+0.4
4,359,640	-		AO353_19830	0.84	-0.5
4,359,769	+				+0.1
4,359,769	+				-0.2
4,359,769	+				+0.5
4,359,770	-				-0.1
4,359,770	-				+0.3
4,359,791	-				-1.5
4,359,791	-				+1.3
4,359,791	-				+1.2
4,359,795	+				-1.7
4,359,795	+				+0.1
4,359,796	-				+0.0
4,359,796	-				+0.1
4,359,889	+				-1.2
4,359,889	+				-1.8
4,359,890	-				-0.4
4,359,928	-				+0.3
4,359,952	+				-0.4
4,359,952	+				+2.0
4,359,952	+				-0.2
4,359,952	+				-0.6
4,359,953	-				+0.7
4,359,953	-				+0.8
4,359,953	-				-0.1
4,359,953	-				-0.1
4,359,964	+				+0.5
4,359,964	+				-1.6
4,359,964	+				-0.1
4,359,964	+				+1.0
4,359,965	-				-0.4
4,359,965	-				+1.2
4,359,965	-				+1.7
4,359,966	+				-0.5
4,359,966	+				+0.8
4,359,966	+				-0.8
4,359,966	+				+0.6
4,359,967	-				-0.1
4,359,967	-				+0.2
4,359,967	-				-0.9
4,359,967	-				+1.7
4,359,967	-				+0.6
4,359,967	-				+0.5
4,360,022	+				-1.7
4,360,023	-				+0.4
4,360,023	-				+0.2
4,360,023	-				-0.5
4,360,118	+		AO353_19835	0.16	-0.5
4,360,118	+		AO353_19835	0.16	+0.1
4,360,118	+		AO353_19835	0.16	-0.4
4,360,118	+		AO353_19835	0.16	-0.1
4,360,119	-		AO353_19835	0.16	+0.9
4,360,119	-		AO353_19835	0.16	-1.9
4,360,119	-		AO353_19835	0.16	+0.1
4,360,119	-		AO353_19835	0.16	+0.1
4,360,119	-		AO353_19835	0.16	+0.1
4,360,119	-		AO353_19835	0.16	+0.2
4,360,307	+		AO353_19835	0.36	-0.6
4,360,307	+		AO353_19835	0.36	-0.2
4,360,307	+		AO353_19835	0.36	-1.0
4,360,307	+		AO353_19835	0.36	+0.1
4,360,307	+		AO353_19835	0.36	-0.0
4,360,307	+		AO353_19835	0.36	+0.1
4,360,307	+		AO353_19835	0.36	-1.1
4,360,308	-		AO353_19835	0.36	-0.0
4,360,308	-		AO353_19835	0.36	-0.7
4,360,308	-		AO353_19835	0.36	-0.3
4,360,308	-		AO353_19835	0.36	-0.1
4,360,313	+		AO353_19835	0.37	+0.4
4,360,313	+		AO353_19835	0.37	+0.7
4,360,313	+		AO353_19835	0.37	+0.5
4,360,313	+		AO353_19835	0.37	+1.1
4,360,313	+		AO353_19835	0.37	+0.5
4,360,313	+		AO353_19835	0.37	+0.1
4,360,313	+				+1.5
4,360,314	-		AO353_19835	0.37	+0.7
4,360,314	-		AO353_19835	0.37	+0.1
4,360,314	-		AO353_19835	0.37	+0.5
4,360,314	-		AO353_19835	0.37	-1.5
4,360,314	-		AO353_19835	0.37	-1.2
4,360,314	-		AO353_19835	0.37	-0.5
4,360,314	-		AO353_19835	0.37	-2.2
4,360,391	+		AO353_19835	0.45	+0.3
4,360,391	+		AO353_19835	0.45	-0.6
4,360,391	+		AO353_19835	0.45	+1.5
4,360,392	-		AO353_19835	0.46	+0.3
4,360,392	-		AO353_19835	0.46	+0.2
4,360,392	-		AO353_19835	0.46	-0.4
4,360,399	-		AO353_19835	0.46	+0.9
4,360,458	+		AO353_19835	0.53	+1.0
4,360,705	-		AO353_19835	0.79	-0.1
4,360,706	+		AO353_19835	0.79	+2.0
4,360,706	+		AO353_19835	0.79	+0.8
4,360,706	+		AO353_19835	0.79	-0.4
4,360,707	-		AO353_19835	0.80	-1.9
4,360,707	-		AO353_19835	0.80	+1.2
4,360,707	-		AO353_19835	0.80	+1.1