Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16035 and AO353_16040 are separated by 651 nucleotides AO353_16040 and AO353_16045 are separated by 549 nucleotides
AO353_16035: AO353_16035 - Lon protease, at 3,543,024 to 3,545,444
_16035
AO353_16040: AO353_16040 - hypothetical protein, at 3,546,096 to 3,546,467
_16040
AO353_16045: AO353_16045 - glucose dehydrogenase, at 3,547,017 to 3,549,428
_16045
Position (kb)
3546
3547 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3545.277 kb on + strand at 3545.277 kb on + strand at 3545.278 kb on - strand at 3545.278 kb on - strand at 3545.278 kb on - strand at 3545.278 kb on - strand at 3545.278 kb on - strand at 3545.320 kb on + strand at 3545.320 kb on + strand at 3545.320 kb on + strand at 3545.320 kb on + strand at 3545.321 kb on - strand at 3545.321 kb on - strand at 3545.321 kb on - strand at 3545.404 kb on + strand at 3545.405 kb on - strand at 3545.466 kb on - strand at 3545.474 kb on + strand at 3545.474 kb on + strand at 3545.474 kb on + strand at 3545.474 kb on + strand at 3545.474 kb on + strand at 3545.474 kb on + strand at 3545.474 kb on + strand at 3545.474 kb on + strand at 3545.474 kb on + strand at 3545.475 kb on - strand at 3545.475 kb on - strand at 3545.475 kb on - strand at 3545.531 kb on + strand at 3545.531 kb on + strand at 3545.531 kb on + strand at 3545.531 kb on + strand at 3545.531 kb on + strand at 3545.532 kb on - strand at 3545.532 kb on - strand at 3545.532 kb on - strand at 3545.532 kb on - strand at 3545.532 kb on - strand at 3545.538 kb on + strand at 3545.538 kb on + strand at 3545.538 kb on + strand at 3545.538 kb on + strand at 3545.538 kb on + strand at 3545.538 kb on + strand at 3545.539 kb on - strand at 3545.539 kb on - strand at 3545.539 kb on - strand at 3545.539 kb on - strand at 3545.539 kb on - strand at 3545.539 kb on - strand at 3545.539 kb on - strand at 3545.539 kb on - strand at 3545.539 kb on - strand at 3545.539 kb on - strand at 3545.539 kb on - strand at 3545.539 kb on - strand at 3545.539 kb on - strand at 3545.550 kb on + strand at 3545.550 kb on + strand at 3545.550 kb on + strand at 3545.550 kb on + strand at 3545.550 kb on + strand at 3545.550 kb on + strand at 3545.550 kb on + strand at 3545.550 kb on + strand at 3545.550 kb on + strand at 3545.550 kb on + strand at 3545.550 kb on + strand at 3545.551 kb on - strand at 3545.551 kb on - strand at 3545.551 kb on - strand at 3545.551 kb on - strand at 3545.551 kb on - strand at 3545.551 kb on - strand at 3545.551 kb on - strand at 3545.551 kb on - strand at 3545.551 kb on - strand at 3545.551 kb on - strand at 3545.551 kb on - strand at 3545.551 kb on - strand at 3545.555 kb on + strand at 3545.555 kb on + strand at 3545.555 kb on + strand at 3545.556 kb on - strand at 3545.556 kb on - strand at 3545.599 kb on + strand at 3545.599 kb on + strand at 3545.599 kb on + strand at 3545.599 kb on + strand at 3545.599 kb on + strand at 3545.599 kb on + strand at 3545.600 kb on - strand at 3545.600 kb on - strand at 3545.600 kb on - strand at 3545.614 kb on + strand at 3545.614 kb on + strand at 3545.614 kb on + strand at 3545.615 kb on - strand at 3545.615 kb on - strand at 3545.615 kb on - strand at 3545.615 kb on - strand at 3545.615 kb on - strand at 3545.615 kb on - strand at 3545.615 kb on - strand at 3545.686 kb on + strand at 3545.686 kb on + strand at 3545.687 kb on - strand at 3545.687 kb on - strand at 3545.687 kb on - strand at 3545.687 kb on - strand at 3545.687 kb on - strand at 3545.687 kb on - strand at 3545.687 kb on - strand at 3545.687 kb on - strand at 3545.687 kb on - strand at 3545.687 kb on - strand at 3545.687 kb on - strand at 3545.687 kb on - strand at 3545.687 kb on - strand at 3545.687 kb on - strand at 3545.687 kb on - strand at 3545.687 kb on - strand at 3545.687 kb on - strand at 3545.691 kb on - strand at 3545.691 kb on - strand at 3545.691 kb on - strand at 3545.691 kb on - strand at 3545.691 kb on - strand at 3545.691 kb on - strand at 3546.032 kb on + strand at 3546.032 kb on + strand at 3546.044 kb on + strand at 3546.044 kb on + strand at 3546.044 kb on + strand at 3546.045 kb on - strand at 3546.045 kb on - strand at 3546.045 kb on - strand at 3546.045 kb on - strand at 3546.045 kb on - strand at 3546.045 kb on - strand at 3546.045 kb on - strand at 3546.053 kb on + strand at 3546.054 kb on - strand at 3546.054 kb on - strand at 3546.054 kb on - strand at 3546.098 kb on - strand at 3546.361 kb on + strand, within AO353_16040 at 3546.361 kb on + strand, within AO353_16040 at 3546.362 kb on - strand, within AO353_16040 at 3546.418 kb on + strand, within AO353_16040 at 3546.418 kb on + strand, within AO353_16040 at 3546.419 kb on - strand, within AO353_16040 at 3546.484 kb on + strand at 3546.485 kb on - strand at 3546.485 kb on - strand at 3546.532 kb on + strand at 3546.533 kb on - strand at 3546.558 kb on - strand at 3546.558 kb on - strand at 3546.558 kb on - strand at 3546.558 kb on - strand at 3546.570 kb on + strand at 3546.580 kb on + strand at 3546.600 kb on + strand at 3546.619 kb on + strand at 3546.619 kb on + strand at 3546.619 kb on + strand at 3546.619 kb on + strand at 3546.619 kb on + strand at 3546.620 kb on - strand at 3546.660 kb on + strand at 3546.661 kb on - strand at 3546.661 kb on - strand at 3546.667 kb on + strand at 3546.667 kb on + strand at 3546.667 kb on + strand at 3546.667 kb on + strand at 3546.668 kb on - strand at 3546.668 kb on - strand at 3546.668 kb on - strand at 3546.668 kb on - strand at 3546.668 kb on - strand at 3546.668 kb on - strand at 3546.668 kb on - strand at 3546.668 kb on - strand at 3546.717 kb on + strand at 3546.717 kb on + strand at 3546.717 kb on + strand at 3546.717 kb on + strand at 3546.717 kb on + strand at 3546.717 kb on + strand at 3546.717 kb on + strand at 3546.717 kb on + strand at 3546.717 kb on + strand at 3546.717 kb on + strand at 3546.717 kb on + strand at 3546.718 kb on - strand at 3546.718 kb on - strand at 3546.718 kb on - strand at 3546.718 kb on - strand at 3546.718 kb on - strand at 3546.718 kb on - strand at 3546.721 kb on + strand at 3546.721 kb on + strand at 3546.721 kb on + strand at 3546.721 kb on + strand at 3546.721 kb on + strand at 3546.721 kb on + strand at 3546.722 kb on - strand at 3546.722 kb on - strand at 3546.775 kb on + strand at 3546.775 kb on + strand at 3546.776 kb on - strand at 3546.776 kb on - strand at 3546.787 kb on - strand at 3546.933 kb on + strand at 3546.933 kb on + strand at 3546.933 kb on + strand at 3546.933 kb on + strand at 3546.933 kb on + strand at 3546.933 kb on + strand at 3546.934 kb on - strand at 3546.934 kb on - strand at 3546.943 kb on + strand at 3546.943 kb on + strand at 3546.943 kb on + strand at 3546.943 kb on + strand at 3546.943 kb on + strand at 3546.943 kb on + strand at 3546.943 kb on + strand at 3546.943 kb on + strand at 3546.944 kb on - strand at 3546.944 kb on - strand at 3546.944 kb on - strand at 3546.944 kb on - strand at 3546.944 kb on - strand at 3546.944 kb on - strand at 3546.944 kb on - strand at 3546.944 kb on - strand at 3546.944 kb on - strand at 3546.944 kb on - strand at 3546.950 kb on + strand at 3546.950 kb on + strand at 3546.951 kb on - strand at 3546.951 kb on - strand at 3546.951 kb on - strand at 3546.951 kb on - strand at 3546.986 kb on + strand at 3546.986 kb on + strand at 3546.987 kb on - strand at 3547.001 kb on + strand at 3547.001 kb on + strand at 3547.002 kb on - strand at 3547.002 kb on - strand at 3547.019 kb on - strand at 3547.033 kb on + strand at 3547.033 kb on + strand at 3547.033 kb on + strand at 3547.034 kb on - strand at 3547.034 kb on - strand at 3547.034 kb on - strand at 3547.045 kb on + strand at 3547.045 kb on + strand at 3547.045 kb on + strand at 3547.045 kb on + strand at 3547.046 kb on - strand at 3547.046 kb on - strand at 3547.046 kb on - strand at 3547.046 kb on - strand at 3547.086 kb on + strand at 3547.086 kb on + strand at 3547.086 kb on + strand at 3547.086 kb on + strand at 3547.086 kb on + strand at 3547.086 kb on + strand at 3547.087 kb on - strand at 3547.087 kb on - strand at 3547.087 kb on - strand at 3547.087 kb on - strand at 3547.087 kb on - strand at 3547.099 kb on + strand at 3547.099 kb on + strand at 3547.099 kb on + strand at 3547.099 kb on + strand at 3547.099 kb on + strand at 3547.100 kb on - strand at 3547.100 kb on - strand at 3547.100 kb on - strand at 3547.100 kb on - strand at 3547.100 kb on - strand at 3547.123 kb on + strand at 3547.123 kb on + strand at 3547.123 kb on + strand at 3547.123 kb on + strand at 3547.123 kb on + strand at 3547.124 kb on - strand at 3547.124 kb on - strand at 3547.124 kb on - strand at 3547.124 kb on - strand at 3547.195 kb on + strand at 3547.195 kb on + strand at 3547.196 kb on - strand at 3547.196 kb on - strand at 3547.196 kb on - strand at 3547.196 kb on - strand at 3547.207 kb on + strand at 3547.208 kb on - strand at 3547.378 kb on + strand, within AO353_16045 at 3547.378 kb on + strand, within AO353_16045 at 3547.379 kb on - strand, within AO353_16045 at 3547.379 kb on - strand, within AO353_16045 at 3547.444 kb on + strand, within AO353_16045
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 3,545,277 + -1.2 3,545,277 + -0.5 3,545,278 - +0.4 3,545,278 - -0.1 3,545,278 - -0.3 3,545,278 - +1.2 3,545,278 - -1.8 3,545,320 + +0.5 3,545,320 + +0.4 3,545,320 + -0.1 3,545,320 + +0.9 3,545,321 - +0.4 3,545,321 - -1.3 3,545,321 - -0.7 3,545,404 + -0.4 3,545,405 - +0.2 3,545,466 - +1.4 3,545,474 + -0.2 3,545,474 + -0.8 3,545,474 + -0.7 3,545,474 + +0.4 3,545,474 + +0.5 3,545,474 + -0.0 3,545,474 + -0.2 3,545,474 + -0.5 3,545,474 + +1.2 3,545,475 - +0.6 3,545,475 - -0.6 3,545,475 - -0.1 3,545,531 + -1.5 3,545,531 + -0.3 3,545,531 + -0.4 3,545,531 + -1.8 3,545,531 + +0.8 3,545,532 - -1.9 3,545,532 - -0.4 3,545,532 - +0.3 3,545,532 - -0.4 3,545,532 - -1.5 3,545,538 + +0.1 3,545,538 + -0.9 3,545,538 + -0.1 3,545,538 + -0.2 3,545,538 + +0.6 3,545,538 + +0.9 3,545,539 - -0.9 3,545,539 - +0.2 3,545,539 - -0.1 3,545,539 - -0.6 3,545,539 - -1.6 3,545,539 - +0.1 3,545,539 - -0.9 3,545,539 - +0.2 3,545,539 - +0.2 3,545,539 - -0.4 3,545,539 - -0.3 3,545,539 - -0.8 3,545,539 - -0.7 3,545,550 + -0.4 3,545,550 + +0.1 3,545,550 + +0.5 3,545,550 + +1.0 3,545,550 + +0.2 3,545,550 + -0.2 3,545,550 + -1.0 3,545,550 + +1.2 3,545,550 + -0.7 3,545,550 + +0.4 3,545,550 + -1.1 3,545,551 - +0.5 3,545,551 - +0.6 3,545,551 - -1.1 3,545,551 - -0.1 3,545,551 - +0.4 3,545,551 - -0.1 3,545,551 - -0.6 3,545,551 - -0.8 3,545,551 - +2.0 3,545,551 - +0.8 3,545,551 - +0.6 3,545,551 - +0.5 3,545,555 + +0.3 3,545,555 + +1.2 3,545,555 + -0.4 3,545,556 - -1.6 3,545,556 - -1.7 3,545,599 + -0.6 3,545,599 + +0.3 3,545,599 + +0.1 3,545,599 + +0.8 3,545,599 + -0.2 3,545,599 + +1.0 3,545,600 - +0.8 3,545,600 - -0.4 3,545,600 - -0.5 3,545,614 + +0.6 3,545,614 + +0.8 3,545,614 + -1.8 3,545,615 - -0.6 3,545,615 - +0.1 3,545,615 - +1.0 3,545,615 - -0.5 3,545,615 - -0.4 3,545,615 - +0.4 3,545,615 - -2.4 3,545,686 + -0.6 3,545,686 + +0.8 3,545,687 - +0.1 3,545,687 - +0.0 3,545,687 - +0.1 3,545,687 - -0.3 3,545,687 - +0.6 3,545,687 - -0.6 3,545,687 - +1.8 3,545,687 - +1.6 3,545,687 - +1.7 3,545,687 - -0.3 3,545,687 - -0.2 3,545,687 - -1.4 3,545,687 - -0.0 3,545,687 - +0.2 3,545,687 - +0.4 3,545,687 - +0.3 3,545,687 - +0.2 3,545,691 - +0.8 3,545,691 - +1.2 3,545,691 - -0.4 3,545,691 - -0.0 3,545,691 - -0.3 3,545,691 - -0.2 3,546,032 + +0.8 3,546,032 + -0.1 3,546,044 + -1.0 3,546,044 + -1.1 3,546,044 + -0.0 3,546,045 - +0.4 3,546,045 - +1.2 3,546,045 - -1.8 3,546,045 - +1.0 3,546,045 - -1.5 3,546,045 - +0.1 3,546,045 - +0.2 3,546,053 + +1.0 3,546,054 - +0.2 3,546,054 - -0.0 3,546,054 - +0.8 3,546,098 - +0.2 3,546,361 + AO353_16040 0.71 -1.1 3,546,361 + AO353_16040 0.71 +1.0 3,546,362 - AO353_16040 0.72 -1.6 3,546,418 + AO353_16040 0.87 -3.1 3,546,418 + AO353_16040 0.87 -0.4 3,546,419 - AO353_16040 0.87 +0.6 3,546,484 + +0.8 3,546,485 - +1.1 3,546,485 - -0.2 3,546,532 + +0.2 3,546,533 - -0.3 3,546,558 - -0.4 3,546,558 - -1.2 3,546,558 - -0.7 3,546,558 - +0.7 3,546,570 + -0.6 3,546,580 + -0.9 3,546,600 + -1.5 3,546,619 + +1.5 3,546,619 + -0.4 3,546,619 + -0.4 3,546,619 + -0.7 3,546,619 + +0.0 3,546,620 - -0.4 3,546,660 + -0.8 3,546,661 - +0.1 3,546,661 - -0.9 3,546,667 + +0.4 3,546,667 + -0.6 3,546,667 + -0.1 3,546,667 + -0.2 3,546,668 - -1.0 3,546,668 - -0.4 3,546,668 - -2.0 3,546,668 - +0.1 3,546,668 - -0.2 3,546,668 - +0.0 3,546,668 - -0.4 3,546,668 - +1.0 3,546,717 + +0.1 3,546,717 + -0.2 3,546,717 + +0.8 3,546,717 + +0.7 3,546,717 + +0.3 3,546,717 + -1.0 3,546,717 + -0.4 3,546,717 + -0.8 3,546,717 + -1.2 3,546,717 + -0.8 3,546,717 + -1.3 3,546,718 - +0.4 3,546,718 - +0.4 3,546,718 - -0.6 3,546,718 - -0.7 3,546,718 - -0.4 3,546,718 - +0.7 3,546,721 + -0.7 3,546,721 + +1.9 3,546,721 + +1.0 3,546,721 + +0.7 3,546,721 + -1.0 3,546,721 + -0.9 3,546,722 - -0.3 3,546,722 - -0.4 3,546,775 + +0.1 3,546,775 + +0.7 3,546,776 - -1.3 3,546,776 - -0.0 3,546,787 - +0.8 3,546,933 + -0.8 3,546,933 + -1.2 3,546,933 + -1.4 3,546,933 + +0.2 3,546,933 + -0.4 3,546,933 + -0.6 3,546,934 - -0.8 3,546,934 - -0.4 3,546,943 + -0.5 3,546,943 + -2.2 3,546,943 + -0.6 3,546,943 + -1.9 3,546,943 + -1.8 3,546,943 + -1.1 3,546,943 + +0.0 3,546,943 + -0.9 3,546,944 - -0.0 3,546,944 - -0.2 3,546,944 - -1.0 3,546,944 - -0.7 3,546,944 - +0.2 3,546,944 - -0.8 3,546,944 - +0.4 3,546,944 - +0.8 3,546,944 - -0.8 3,546,944 - -1.1 3,546,950 + +1.5 3,546,950 + +1.0 3,546,951 - -1.0 3,546,951 - -0.5 3,546,951 - -0.7 3,546,951 - +0.4 3,546,986 + -0.9 3,546,986 + -0.6 3,546,987 - -2.2 3,547,001 + -1.8 3,547,001 + -1.1 3,547,002 - -0.2 3,547,002 - -0.4 3,547,019 - +0.0 3,547,033 + -1.0 3,547,033 + +0.2 3,547,033 + -0.4 3,547,034 - +0.7 3,547,034 - -1.9 3,547,034 - -1.8 3,547,045 + +0.8 3,547,045 + -0.2 3,547,045 + -1.6 3,547,045 + -0.8 3,547,046 - -1.3 3,547,046 - +1.0 3,547,046 - -0.7 3,547,046 - +0.4 3,547,086 + -2.3 3,547,086 + -0.6 3,547,086 + -0.7 3,547,086 + -1.2 3,547,086 + -0.7 3,547,086 + +0.6 3,547,087 - +1.4 3,547,087 - -2.3 3,547,087 - +1.9 3,547,087 - -0.0 3,547,087 - -0.3 3,547,099 + +0.1 3,547,099 + +2.5 3,547,099 + -0.6 3,547,099 + -0.2 3,547,099 + +1.3 3,547,100 - +0.2 3,547,100 - +0.2 3,547,100 - -0.9 3,547,100 - -1.4 3,547,100 - -2.0 3,547,123 + -0.8 3,547,123 + -0.7 3,547,123 + +1.5 3,547,123 + +1.2 3,547,123 + +0.6 3,547,124 - -0.4 3,547,124 - -1.3 3,547,124 - -1.4 3,547,124 - -0.1 3,547,195 + +0.8 3,547,195 + -1.9 3,547,196 - -0.3 3,547,196 - -1.0 3,547,196 - -0.2 3,547,196 - -0.6 3,547,207 + +1.5 3,547,208 - -2.1 3,547,378 + AO353_16045 0.15 -0.5 3,547,378 + AO353_16045 0.15 -0.2 3,547,379 - AO353_16045 0.15 +0.9 3,547,379 - AO353_16045 0.15 +0.4 3,547,444 + AO353_16045 0.18 -1.0
Or see this region's nucleotide sequence