Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14335

Experiment: Gly-DL-Asp (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gly-DL-Asp (N)
3,176,588	+		AO353_14330	0.63	-1.4
3,176,588	+		AO353_14330	0.63	-0.3
3,176,644	+		AO353_14330	0.66	-0.4
3,176,645	-		AO353_14330	0.66	-1.2
3,176,645	-		AO353_14330	0.66	-1.1
3,177,095	-				+0.8
3,177,095	-				-0.9
3,177,095	-				-2.5
3,177,101	+				+1.2
3,177,101	+				-0.3
3,177,101	+				-0.6
3,177,101	+				-0.1
3,177,102	-				+0.3
3,177,102	-				+0.7
3,177,102	-				-1.0
3,177,102	-				+1.4
3,177,102	-				-0.2
3,177,102	-				-0.3
3,177,102	-				+2.2
3,177,102	-				+0.8
3,177,102	-				-0.8
3,177,140	+				-1.4
3,177,141	-				+1.3
3,177,228	+				+1.2
3,177,228	+				-1.0
3,177,229	-				+1.6
3,177,253	+				+1.5
3,177,253	+				+0.8
3,177,253	+				+1.1
3,177,253	+				+0.4
3,177,253	+				+0.4
3,177,253	+				+0.0
3,177,253	+				-1.2
3,177,253	+				+1.2
3,177,253	+				-0.1
3,177,253	+				-0.3
3,177,253	+				+0.1
3,177,253	+				+0.9
3,177,253	+				+0.6
3,177,253	+				+0.4
3,177,253	+				-0.6
3,177,253	+				-0.1
3,177,253	+				+0.5
3,177,253	+				+1.7
3,177,253	+				+0.3
3,177,253	+				-1.7
3,177,254	-				-0.1
3,177,254	-				-0.7
3,177,254	-				+0.1
3,177,254	-				+0.9
3,177,254	-				+0.5
3,177,254	-				-0.9
3,177,254	-				-0.2
3,177,254	-				-0.5
3,177,255	+				-0.1
3,177,255	+				-0.2
3,177,255	+				-1.9
3,177,255	+				-0.3
3,177,255	+				+0.7
3,177,255	+				+0.7
3,177,255	+				+2.4
3,177,255	+				+1.3
3,177,256	-				-1.7
3,177,256	-				-0.4
3,177,256	-				+0.6
3,177,256	-				+1.2
3,177,256	-				-0.1
3,177,256	-				+2.1
3,177,256	-				+0.1
3,177,256	-				-1.2
3,177,260	+				+0.5
3,177,261	-				+0.4
3,177,261	-				+1.6
3,177,261	-				-0.5
3,177,261	-				-0.7
3,177,313	+				-0.2
3,177,313	+				+0.5
3,177,313	+				+0.5
3,177,313	+				+0.3
3,177,314	-				+0.1
3,177,314	-				+0.7
3,177,314	-				+1.3
3,177,314	-				-0.6
3,177,331	+				-1.7
3,177,331	+				-0.8
3,177,332	-				-1.7
3,177,332	-				+0.6
3,177,364	+				+1.7
3,177,365	-				+0.7
3,177,365	-				-1.3
3,177,365	-				-1.3
3,177,448	+				-0.6
3,177,448	+				+0.3
3,177,448	+				-0.1
3,177,448	+				+0.6
3,177,448	+				-0.5
3,177,448	+				+0.8
3,177,449	-				-1.4
3,177,449	-				-0.3
3,177,449	-				-0.9
3,177,449	-				-1.5
3,177,449	-				+0.8
3,177,449	-				-0.2
3,177,454	+				+0.3
3,177,454	+				+0.7
3,177,455	-				+1.2
3,177,455	-				+0.7
3,177,469	+				+1.5
3,177,470	-				-0.4
3,177,470	-				+0.7
3,177,536	+		AO353_14335	0.21	+0.3
3,177,536	+		AO353_14335	0.21	-2.2
3,177,536	+		AO353_14335	0.21	-1.7
3,177,537	-		AO353_14335	0.21	-0.7
3,177,537	-		AO353_14335	0.21	-2.1
3,177,537	-		AO353_14335	0.21	+0.6
3,177,537	-		AO353_14335	0.21	+0.7
3,177,545	+		AO353_14335	0.23	-0.5
3,177,546	-		AO353_14335	0.24	+0.1
3,177,546	-		AO353_14335	0.24	-1.4
3,177,616	+		AO353_14335	0.41	-1.7
3,177,616	+		AO353_14335	0.41	-1.1
3,177,617	-		AO353_14335	0.41	-0.4
3,177,617	-		AO353_14335	0.41	+0.0
3,177,667	+		AO353_14335	0.53	-0.6
3,177,718	+		AO353_14335	0.65	-1.0
3,177,718	+		AO353_14335	0.65	-2.1
3,177,718	+		AO353_14335	0.65	-0.3
3,177,718	+		AO353_14335	0.65	-0.3
3,177,719	-		AO353_14335	0.66	+0.7
3,177,719	-		AO353_14335	0.66	+0.1
3,177,719	-		AO353_14335	0.66	+0.2
3,177,719	-		AO353_14335	0.66	-1.2
3,177,719	-		AO353_14335	0.66	+0.7
3,177,719	-		AO353_14335	0.66	-2.1
3,177,721	+		AO353_14335	0.66	-0.5
3,177,721	+		AO353_14335	0.66	+0.3
3,177,721	+		AO353_14335	0.66	-0.1
3,177,721	+		AO353_14335	0.66	+0.1
3,177,721	+		AO353_14335	0.66	-1.3
3,177,722	-		AO353_14335	0.66	-0.0
3,177,722	-		AO353_14335	0.66	-0.4
3,177,722	-		AO353_14335	0.66	+0.2
3,177,722	-		AO353_14335	0.66	-0.8
3,177,722	-		AO353_14335	0.66	+1.3
3,177,830	+				-0.5
3,177,830	+				-0.7
3,177,831	-				+0.3
3,177,831	-				-0.8
3,177,831	-				-1.1
3,177,890	+				-1.3
3,177,934	-				-0.5
3,177,934	-				+0.4
3,178,136	+				+0.2
3,178,136	+				+0.1
3,178,136	+				+0.6
3,178,136	+				+0.4
3,178,137	-				-0.2
3,178,137	-				+1.2
3,178,137	-				+0.3
3,178,137	-				+1.3
3,178,137	-				-0.3
3,178,137	-				-0.6
3,178,137	-				+2.9
3,178,301	+		AO353_14340	0.46	+0.0
3,178,302	-				+2.2
3,178,302	-		AO353_14340	0.46	-0.8
3,178,396	+		AO353_14340	0.73	+0.3
3,178,396	+		AO353_14340	0.73	+0.3
3,178,396	+		AO353_14340	0.73	+0.5
3,178,397	-				+1.7
3,178,421	+		AO353_14340	0.80	-0.0
3,178,421	+		AO353_14340	0.80	-0.9
3,178,421	+		AO353_14340	0.80	-1.7
3,178,421	+		AO353_14340	0.80	-1.7
3,178,422	-		AO353_14340	0.80	+0.5
3,178,422	-		AO353_14340	0.80	+1.3
3,178,422	-		AO353_14340	0.80	+0.2
3,178,491	+				+0.3
3,178,491	+				+0.7
3,178,491	+				+1.0
3,178,554	-				-1.6
3,178,554	-				+3.2
3,178,573	+				-0.0
3,178,574	-				+0.9
3,178,574	-				-0.7
3,178,660	+		AO353_14345	0.18	-1.3
3,178,660	+		AO353_14345	0.18	+0.8
3,178,660	+		AO353_14345	0.18	+0.3
3,178,661	-		AO353_14345	0.19	-2.1
3,178,661	-		AO353_14345	0.19	+1.1
3,178,666	+		AO353_14345	0.20	+1.9
3,178,666	+		AO353_14345	0.20	+0.1
3,178,666	+		AO353_14345	0.20	+0.7
3,178,666	+		AO353_14345	0.20	+1.3
3,178,666	+		AO353_14345	0.20	+0.2
3,178,666	+		AO353_14345	0.20	-1.6
3,178,666	+		AO353_14345	0.20	+0.7
3,178,666	+		AO353_14345	0.20	+0.8
3,178,666	+		AO353_14345	0.20	+0.8
3,178,666	+		AO353_14345	0.20	-0.5
3,178,667	-		AO353_14345	0.21	+0.1
3,178,667	-		AO353_14345	0.21	+0.3
3,178,667	-		AO353_14345	0.21	-1.7
3,178,667	-		AO353_14345	0.21	+1.1
3,178,667	-		AO353_14345	0.21	+1.0
3,178,667	-		AO353_14345	0.21	-1.8
3,178,667	-		AO353_14345	0.21	-1.6
3,178,667	-		AO353_14345	0.21	+0.7
3,178,667	-		AO353_14345	0.21	+0.2
3,178,667	-		AO353_14345	0.21	+0.0
3,178,667	-		AO353_14345	0.21	+1.3
3,178,667	-		AO353_14345	0.21	-1.2
3,178,667	-		AO353_14345	0.21	-1.1
3,178,667	-		AO353_14345	0.21	+0.1
3,178,687	+		AO353_14345	0.27	+0.5
3,178,687	+		AO353_14345	0.27	-0.0
3,178,688	-		AO353_14345	0.28	-0.6
3,178,688	-		AO353_14345	0.28	-1.9
3,178,688	-		AO353_14345	0.28	-1.4
3,178,739	-		AO353_14345	0.45	-2.0
3,178,835	+		AO353_14345	0.77	-0.1